Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G3267 Fragaria x ananassa HOM05D005638 ORTHO05D006913 9.3e-237 823.2 420 100.0
FvH4_4g26400 Fragaria vesca HOM05D005638 ORTHO05D006913 4.6e-236 820.8 420 99.8
FAN12G2479 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.0e-235 819.7 420 99.5
FAN07G1772 Fragaria x ananassa HOM05D005638 ORTHO05D006913 3.8e-222 774.6 463 88.3
RcHm_v2.0_Chr4g0434031 Rosa chinensis HOM05D005638 ORTHO05D006913 1.1e-216 756.5 420 91.9
FAN22G2072 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.1e-205 719.9 442 85.7
FAN17G1216 Fragaria x ananassa HOM05D005638 ORTHO05D006913 7.7e-199 697.2 441 84.8
Prupe.1G319900 Prunus persica HOM05D005638 ORTHO05D006913 4.7e-196 688.0 420 81.7
CSS0002078 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 2.8e-188 662.1 418 78.5
CSS0005399 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 6.1e-188 661.0 418 78.5
MD16G1034700 Malus domestica HOM05D005638 ORTHO05D006913 6.8e-187 657.5 421 79.1
Haze_00683 Corylus avellana HOM05D005638 ORTHO05D006913 7.0e-184 647.5 425 76.9
Potri.008G126300 Populus trichocarpa HOM05D005638 ORTHO05D006913 9.2e-184 647.1 417 76.5
QL01p003053 Quercus lobata HOM05D005638 ORTHO05D006913 4.5e-183 644.8 440 75.5
Ciclev10015376m.g Citrus clementina HOM05D005638 ORTHO05D006913 3.8e-182 641.7 419 78.5
Thecc.05G134700 Theobroma cacao HOM05D005638 ORTHO05D006913 1.1e-181 640.2 414 77.5
TWI75G0624 Tripterygium wilfordii HOM05D005638 ORTHO05D006913 2.1e-180 636.0 415 76.9
Sabra08G0095100 Salix brachista HOM05D005638 ORTHO05D006913 2.8e-180 635.6 408 77.0
Eucgr.H00037 Eucalyptus grandis HOM05D005638 ORTHO05D006913 6.1e-180 634.4 414 74.2
GSVIVG01011806001 Vitis vinifera HOM05D005638 ORTHO05D006913 3.0e-179 632.1 415 76.9
CANSAT01G0033 Cannabis sativa HOM05D005638 ORTHO05D006913 5.2e-179 631.3 418 76.6
Hma1.2p1_0882F.1_g232180 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 8.9e-179 630.6 408 75.7
Gorai.013G001800 Gossypium raimondii HOM05D005638 ORTHO05D006913 9.8e-178 627.1 414 74.9
Gohir.A13G000300 Gossypium hirsutum HOM05D005638 ORTHO05D006913 1.7e-177 626.3 414 74.9
COL.COLO4_22224 Corchorus olitorius HOM05D005638 ORTHO05D006913 4.9e-177 624.8 414 75.4
CARHR143670 Cardamine hirsuta HOM05D005638 ORTHO05D006913 6.4e-177 624.4 416 72.6
CsaV3_5G010590 Cucumis sativus L. HOM05D005638 ORTHO05D006913 1.4e-176 623.2 410 74.6
Sed0003483 Sechium edule HOM05D005638 ORTHO05D006913 1.4e-176 623.2 407 76.2
Thhalv10000894m.g Eutrema salsugineum HOM05D005638 ORTHO05D006913 1.8e-176 622.9 422 72.0
MELO3C034164.2 Cucumis melo HOM05D005638 ORTHO05D006913 4.1e-176 621.7 410 75.1
BcaC06g31332 Brassica carinata HOM05D005638 ORTHO05D006913 1.2e-175 620.2 416 71.9
Sp2g12590 Schrenkiella parvula HOM05D005638 ORTHO05D006913 1.2e-175 620.2 416 71.9
ClCG07G004650 Citrullus lanatus HOM05D005638 ORTHO05D006913 2.0e-175 619.4 419 74.5
PGSC0003DMG401030517 Solanum tuberosum HOM05D005638 ORTHO05D006913 3.5e-175 618.6 416 72.4
Carub.0005s0010 Capsella rubella HOM05D005638 ORTHO05D006913 4.6e-175 618.2 416 72.6
Cc11_g09280 Coffea canephora HOM05D005638 ORTHO05D006913 4.6e-175 618.2 418 72.2
PGR119G2299 Punica granatum HOM05D005638 ORTHO05D006913 5.9e-175 617.8 414 74.4
AL5G10070 Arabidopsis lyrata HOM05D005638 ORTHO05D006913 7.8e-175 617.5 416 71.9
Nn4g24022 Nelumbo nucifera HOM05D005638 ORTHO05D006913 7.8e-175 617.5 420 73.8
Sopen05g004380 Solanum pennellii HOM05D005638 ORTHO05D006913 5.0e-174 614.8 415 72.0
Solyc05g008540.3 Solanum lycopersicum HOM05D005638 ORTHO05D006913 6.6e-174 614.4 415 72.3
CAN.G1489.15 Capsicum annuum HOM05D005638 ORTHO05D006913 1.1e-173 613.6 415 72.3
arahy.Tifrunner.gnm1.ann1.NRC6UQ Arachis hypogaea HOM05D005638 ORTHO05D006913 3.3e-173 612.1 418 73.0
A06p44660 Brassica napus HOM05D005638 ORTHO05D006913 9.5e-173 610.5 445 68.3
ECA246G4189 Erigeron canadensis HOM05D005638 ORTHO05D006913 6.2e-172 607.8 409 74.1
arahy.Tifrunner.gnm1.ann1.CLD3MC Arachis hypogaea HOM05D005638 ORTHO05D006913 1.0e-171 607.1 418 72.5
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 6.8e-171 604.4 424 71.5
C07p31590 Brassica napus HOM05D005638 ORTHO05D006913 8.9e-171 604.0 445 67.4
BcaC06g34215 Brassica carinata HOM05D005638 ORTHO05D006913 2.0e-170 602.8 445 67.2
THA.LOC104805050 Tarenaya hassleriana HOM05D005638 ORTHO05D006913 2.0e-170 602.8 416 70.9
EL10Ac6g14273 Beta vulgaris HOM05D005638 ORTHO05D006913 2.9e-169 599.0 414 70.8
Medtr1g109100 Medicago truncatula HOM05D005638 ORTHO05D006913 6.4e-169 597.8 411 72.7
Psat6g222760 Pisum sativum HOM05D005638 ORTHO05D006913 6.4e-169 597.8 410 72.9
Migut.E00391 Erythranthe guttata HOM05D005638 ORTHO05D006913 1.1e-168 597.0 418 70.6
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 1.4e-168 596.7 426 68.5
HanXRQChr17g0534901 Helianthus annuus HOM05D005638 ORTHO05D006913 7.0e-168 594.3 415 70.6
Lalb_Chr02g0145641 Lupinus albus HOM05D005638 ORTHO05D006913 2.0e-167 592.8 413 71.4
Lsat_1_v5_gn_3_11020 Lactuca sativa HOM05D005638 ORTHO05D006913 7.8e-167 590.9 416 71.4
Ca_30212_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 1.3e-166 590.1 406 73.4
AT2G01120 Arabidopsis thaliana HOM05D005638 ORTHO05D006913 2.3e-166 589.3 417 68.8
Hund25015 Selenicereus undatus HOM05D005638 ORTHO05D006913 8.6e-166 587.4 413 70.2
Manes.10G073400 Manihot esculenta HOM05D005638 ORTHO05D006913 1.5e-165 586.6 416 70.7
Peaxi162Scf00205g01130 Petunia axillaris HOM05D005638 ORTHO05D006913 1.5e-165 586.6 408 71.3
Lj5g0007245 Lotus japonicus HOM05D005638 ORTHO05D006913 1.9e-165 586.3 414 71.5
Phvul.007G034200 Phaseolus vulgaris HOM05D005638 ORTHO05D006913 1.9e-165 586.3 418 70.8
MSTRG.2199 Avicennia marina HOM05D005638 ORTHO05D006913 9.5e-165 583.9 418 69.9
Aa31LG2G8760 Aethionema arabicum HOM05D005638 ORTHO05D006913 1.2e-164 583.6 416 68.8
Sc14g0007070 Simmondsia chinensis HOM05D005638 ORTHO05D006913 1.6e-164 583.2 417 70.3
CiPaw.05G245200 Carya illinoinensis HOM05D005638 ORTHO05D006913 3.6e-164 582.0 418 71.5
Oeu064207.2 Olea europaea HOM05D005638 ORTHO05D006913 2.6e-162 575.9 462 64.3
Duzib106G1906 Durio zibethinus HOM05D005638 ORTHO05D006913 8.3e-161 570.9 405 71.1
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 1.1e-160 570.5 455 65.7
Glyma.10G268100 Glycine max HOM05D005638 ORTHO05D006913 3.5e-159 565.5 418 70.3
Glyma.20G123000 Glycine max HOM05D005638 ORTHO05D006913 6.0e-159 564.7 418 70.6
BraA06t27339Z Brassica rapa HOM05D005638 ORTHO05D006913 6.6e-158 561.2 422 66.6
vmacro10617 Vaccinium macrocarpon HOM05D005638 ORTHO05D006913 3.3e-157 558.9 461 62.7
Aqoxy5G03877 Aquilegia oxysepala HOM05D005638 ORTHO05D006913 1.2e-156 557.0 412 68.2
BcaB07g30423 Brassica carinata HOM05D005638 ORTHO05D006913 1.6e-156 556.6 443 64.1
Cpa.g.sc65.90 Carica papaya HOM05D005638 ORTHO05D006913 1.3e-153 547.0 382 73.6
AUR62042716 Chenopodium quinoa HOM05D005638 ORTHO05D006913 2.3e-150 536.2 446 62.3
Atru.chr11.333 Acer truncatum HOM05D005638 ORTHO05D006913 8.6e-150 534.3 334 79.9
Nitab4.5_0013146g0020 Nicotiana tabacum HOM05D005638 ORTHO05D006913 2.8e-148 529.3 484 59.3
SalBow8G2600 Salvia bowleyana HOM05D005638 ORTHO05D006913 3.1e-147 525.8 418 64.4
PSO017G2298 Papaver somniferum HOM05D005638 ORTHO05D006913 9.0e-147 524.2 402 66.4
Gohir.D13G001900 Gossypium hirsutum HOM05D005638 ORTHO05D006913 1.5e-146 523.5 414 65.2
PSO478G2841 Papaver somniferum HOM05D005638 ORTHO05D006913 4.4e-146 521.9 402 66.2
HPP92_020141 Vanilla planifolia HOM05D005638 ORTHO05D006913 8.4e-145 517.7 412 60.4
Os01g0683400 Oryza sativa ssp. japonica HOM05D005638 ORTHO05D006913 1.4e-144 516.9 458 57.9
PSO782G2730 Papaver somniferum HOM05D005638 ORTHO05D006913 4.2e-144 515.4 402 65.2
Dinv16164 Davidia involucrata HOM05D005638 ORTHO05D006913 2.7e-143 512.7 346 75.7
ATR0691G289 Amborella trichopoda HOM05D005638 ORTHO05D006913 8.1e-140 501.1 414 63.5
SEGI_39107 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 5.8e-138 495.0 413 60.0
unitig_52.g17425 Utricularia gibba HOM05D005638 ORTHO05D006913 1.4e-136 490.3 424 59.0
Atru.chr11.340 Acer truncatum HOM05D005638 ORTHO05D006913 7.1e-136 488.0 305 80.7
MBI10_g06749_MAGBIO Magnolia biondii HOM05D005638 ORTHO05D006913 9.3e-136 487.6 360 68.1
VMungo0720G2401 Vigna mungo HOM05D005638 ORTHO05D006913 8.7e-134 481.1 469 57.8
Zm00001eb156550 Zea mays HOM05D005638 ORTHO05D006913 2.4e-123 446.4 411 57.2
Rhsim11G0032100 Rhododendron simsii HOM05D005638 ORTHO05D006913 3.3e-117 426.0 285 73.3
TAR622G0052 Trochodendron aralioides HOM05D005638 ORTHO05D006913 3.7e-116 422.5 322 69.9
Dinv04905 Davidia involucrata HOM05D005638 ORTHO05D006913 2.9e-113 412.9 421 55.6
Ah.03g138510 Amaranthus hybridus HOM05D005638 ORTHO05D006913 1.8e-107 393.7 283 68.6
TPR.G31713 Trifolium pratense HOM05D005638 ORTHO05D006913 1.9e-104 383.6 264 73.9
Pp3c16_11150 Physcomitrium patens HOM05D005638 ORTHO05D006913 9.7e-101 371.3 421 47.0
Ca_23705_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 1.4e-96 357.5 240 76.2
Mapoly0031s0066 Marchantia polymorpha HOM05D005638 ORTHO05D006913 1.9e-96 357.1 411 49.6
Hma1.2p1_0882F.1_g232170 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 8.0e-95 351.7 215 80.0
Cfa015815 Carpinus fangiana HOM05D005638 ORTHO05D006913 7.4e-93 345.1 215 79.5
SGA_v2.0_scaffold170G38821 Striga asiatica HOM05D005638 ORTHO05D006913 9.7e-93 344.7 263 66.2
CBR_g38777 Chara braunii HOM05D005638 ORTHO05D006913 1.7e-92 344.0 399 47.9
A02p31700 Brassica napus HOM05D005638 ORTHO05D006913 5.0e-89 332.4 318 57.2
BcaC03g16999 Brassica carinata HOM05D005638 ORTHO05D006913 9.4e-88 328.2 242 66.1
AUR62014211 Chenopodium quinoa HOM05D005638 ORTHO05D006913 2.2e-84 317.0 361 50.1
BolC2t10998H Brassica oleracea HOM05D005638 ORTHO05D006913 8.2e-84 315.1 412 44.7
C02p49080 Brassica napus HOM05D005638 ORTHO05D006913 9.1e-83 311.6 314 52.9
AagrBONN_evm.TU.Sc2ySwM_344.3309 Anthoceros agrestis HOM05D005638 ORTHO05D006913 1.0e-73 281.6 364 46.2
PSO170G3371 Papaver somniferum HOM05D005638 ORTHO05D006913 7.0e-67 258.8 225 60.4
MD13G1032700 Malus domestica HOM05D005638 ORTHO05D006913 5.9e-66 255.8 166 80.1
Thecc.06G067600 Theobroma cacao HOM05D005638 ORTHO05D006913 3.4e-61 240.0 142 78.9
PRCOL_00001621 Prasinoderma coloniale HOM05D005638 ORTHO05D006913 5.0e-57 226.1 405 36.3
MD13G1032600 Malus domestica HOM05D005638 ORTHO05D006913 1.9e-56 224.2 155 72.3
Hma1.2p1_0882F.1_g232190 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 8.0e-55 218.8 137 74.5
SEGI_20204 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 1.2e-50 204.9 179 57.0
CDE11G0817 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 1.5e-48 198.0 125 76.0
SMO351G0247 Selaginella moellendorffii HOM05D005638 ORTHO05D006913 4.7e-47 193.0 405 34.1
MCO02G007 Micromonas commoda HOM05D005638 ORTHO05D006913 1.2e-37 161.8 306 34.3
Rhsim11G0032000 Rhododendron simsii HOM05D005638 ORTHO05D006913 7.8e-34 149.1 157 52.2
CDE11G0802 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 8.7e-33 145.6 101 68.3
BraA02t08176Z Brassica rapa HOM05D005638 ORTHO05D006913 2.5e-32 144.1 107 71.0
TPR.G7417 Trifolium pratense HOM05D005638 ORTHO05D006913 5.3e-30 136.3 94 73.4
TPR.G15740 Trifolium pratense HOM05D005638 ORTHO05D006913 3.8e-28 130.2 87 75.9
FAN28G2655 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.9e-24 117.9 68 88.2
Cfa022174 Carpinus fangiana HOM05D005638 ORTHO05D006913 8.1e-23 112.5 357 29.7
Cre17.g726500 Chlamydomonas reinhardtii HOM05D005638 ORTHO05D006913 5.8e-21 106.3 131 45.0
SEGI_29357 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 3.2e-19 100.5 95 51.6
Rhsim09G0101800 Rhododendron simsii HOM05D005638 ORTHO05D006913 4.6e-18 96.7 116 54.3
Rhsim09G0101700 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.4e-14 85.1 79 51.9
SHI16222 Sapria himalayana HOM05D000030 ORTHO05D007344 1.8e-14 84.7 54 79.6


User provided reference genes

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