Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G3210 Fragaria x ananassa HOM05D007543 ORTHO05D009555 1.4e-37 159.1 80 100.0
FAN11G1069 Fragaria x ananassa HOM05D007543 ORTHO05D009555 8.8e-19 96.7 143 46.9
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 2.8e-09 65.1 37 81.1
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 8.2e-09 63.5 37 81.1
MD13G1227700 Malus domestica HOM05D007543 ORTHO05D009555 1.4e-08 62.8 37 75.7
HanXRQChr06g0183241 Helianthus annuus HOM05D007543 ORTHO05D009555 1.8e-08 62.4 37 73.0
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 1.8e-08 62.4 37 78.4
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 1.8e-08 62.4 37 75.7
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 7.0e-08 60.5 36 77.8
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 7.0e-08 60.5 37 75.7
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 7.0e-08 60.5 37 75.7
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 9.1e-08 60.1 37 75.7
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 9.1e-08 60.1 37 75.7
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 1.6e-07 59.3 36 75.0
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 1.6e-07 59.3 37 73.0
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 1.6e-07 59.3 37 73.0
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 2.0e-07 58.9 37 64.9
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 2.0e-07 58.9 37 73.0
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 2.7e-07 58.5 37 70.3
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 3.5e-07 58.2 37 70.3
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 3.5e-07 58.2 37 70.3
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 4.5e-07 57.8 37 70.3
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 4.5e-07 57.8 37 67.6
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 7.7e-07 57.0 37 70.3
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 7.7e-07 57.0 37 67.6
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 7.7e-07 57.0 37 70.3
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 7.7e-07 57.0 40 62.5
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 1.0e-06 56.6 37 67.6
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 1.0e-06 56.6 36 72.2
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 1.0e-06 56.6 39 69.2
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 1.7e-06 55.8 37 67.6
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 2.2e-06 55.5 36 69.4
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 2.2e-06 55.5 37 67.6
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 2.9e-06 55.1 37 70.3
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 2.9e-06 55.1 37 70.3
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 5.0e-06 54.3 37 67.6
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 5.0e-06 54.3 37 67.6


User provided reference genes

Program Settings