Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.5e-234 815.8 411 100.0
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 1.2e-228 796.2 400 100.0
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.3e-227 792.7 411 97.1
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.6e-225 785.8 441 91.6
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 3.4e-215 751.5 411 91.7
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 1.1e-202 709.9 405 87.2
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 5.6e-202 707.6 364 97.5
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 1.8e-184 649.4 409 79.2
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 4.2e-181 638.3 391 80.3
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 4.2e-181 638.3 406 79.8
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 1.9e-178 629.4 400 79.0
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 1.9e-178 629.4 393 78.6
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 1.6e-177 626.3 358 87.4
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 6.2e-177 624.4 404 79.5
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 6.9e-176 620.9 405 76.0
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 9.0e-176 620.5 392 79.1
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 1.5e-175 619.8 405 75.6
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 5.8e-175 617.8 415 74.9
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 1.9e-173 612.8 403 76.4
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 3.2e-173 612.1 407 74.2
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 5.4e-173 611.3 400 75.5
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 7.1e-173 610.9 396 77.0
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 7.1e-173 610.9 405 74.6
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 2.1e-172 609.4 404 76.2
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 4.6e-172 608.2 396 76.3
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 1.8e-171 606.3 380 78.9
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 3.9e-171 605.1 431 71.7
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 6.7e-171 604.4 411 74.9
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 2.5e-170 602.4 400 75.8
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 1.3e-169 600.1 364 79.9
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 3.7e-169 598.6 417 74.6
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 6.2e-169 597.8 395 75.2
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 6.2e-169 597.8 391 76.7
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 6.2e-169 597.8 407 74.2
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 4.0e-168 595.1 411 72.3
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 4.0e-168 595.1 359 81.1
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 9.0e-168 594.0 392 75.8
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 2.6e-167 592.4 428 70.6
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 5.8e-167 591.3 369 78.0
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 7.6e-167 590.9 386 75.9
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 8.4e-166 587.4 369 77.5
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 1.4e-165 586.6 404 72.3
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 4.2e-165 585.1 404 73.0
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 9.3e-165 583.9 372 77.2
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 9.3e-165 583.9 388 76.0
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 2.1e-164 582.8 359 79.9
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 2.7e-164 582.4 411 73.0
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 4.6e-164 581.6 436 70.2
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 6.0e-164 581.3 392 73.7
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 2.3e-163 579.3 413 71.4
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 3.0e-163 578.9 405 71.9
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 3.0e-163 578.9 394 74.9
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 3.0e-163 578.9 408 71.8
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 1.9e-162 576.2 391 73.9
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 2.5e-162 575.9 404 71.5
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 5.7e-162 574.7 383 74.2
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 1.8e-160 569.7 350 78.9
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 3.1e-160 568.9 384 74.0
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 1.6e-156 556.6 397 71.8
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 7.9e-156 554.3 356 74.2
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 3.3e-154 548.9 404 69.3
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 6.3e-153 544.7 355 74.4
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 1.4e-152 543.5 404 70.5
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 2.4e-152 542.7 378 70.9
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 1.5e-151 540.0 352 77.6
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 5.9e-151 538.1 392 69.6
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 7.7e-151 537.7 424 67.7
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 4.1e-144 515.4 390 63.8
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 1.0e-142 510.8 353 68.8
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 2.0e-138 496.5 399 66.4
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 3.1e-136 489.2 393 61.8
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 3.1e-136 489.2 393 61.8
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 8.5e-134 481.1 402 64.9
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 2.5e-133 479.6 366 69.4
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 9.7e-130 467.6 399 63.9
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 1.3e-126 457.2 408 58.8
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 1.6e-116 423.7 259 79.5
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 9.8e-114 414.5 268 75.7
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 9.1e-112 407.9 256 78.1
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 2.7e-111 406.4 316 69.9
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 8.6e-110 401.4 393 53.2
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 3.1e-99 366.3 251 74.5
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 2.2e-97 360.1 293 63.5
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 1.7e-89 334.0 231 69.3
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 1.8e-83 313.9 355 47.9
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 2.9e-81 306.6 174 81.6
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 1.2e-71 274.6 228 62.7
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 2.5e-61 240.4 145 79.3
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 3.4e-50 203.4 140 73.6
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 1.0e-49 201.8 134 77.6
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 3.3e-13 80.5 77 58.4
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 3.0e-06 57.4 95 45.3


User provided reference genes

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