Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G3166 Fragaria x ananassa HOM05D000009 ORTHO05D206396 2.7e-118 428.7 220 100.0
FAN12G1453 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.1e-84 317.0 273 70.3
FvH4_4g25750 Fragaria vesca HOM05D000009 ORTHO05D000008 2.4e-82 309.3 273 68.9
RcHm_v2.0_Chr4g0433191 Rosa chinensis HOM05D000009 ORTHO05D000008 1.3e-56 223.8 278 51.8
FAN07G1718 Fragaria x ananassa HOM05D000009 ORTHO05D000008 5.5e-55 218.4 276 53.6
MD14G1049100 Malus domestica HOM05D000009 ORTHO05D000008 7.0e-18 95.1 261 29.9
RcHm_v2.0_Chr7g0235331 Rosa chinensis HOM05D000009 ORTHO05D000008 1.6e-14 84.0 175 33.7
FAN04G0121 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.1e-14 83.6 182 34.1
Aqoxy2G00479 Aquilegia oxysepala HOM05D000009 ORTHO05D000008 2.3e-13 80.1 279 25.4
Cc02_g36190 Coffea canephora HOM05D000009 ORTHO05D000008 1.5e-12 77.4 271 27.7
FAN13G1252 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.6e-12 76.6 180 33.3
Dinv23121 Davidia involucrata HOM05D000009 ORTHO05D000008 5.8e-12 75.5 228 31.1
Aqoxy2G00448 Aquilegia oxysepala HOM05D000009 ORTHO05D000008 9.8e-12 74.7 261 27.6
FvH4_5g34680 Fragaria vesca HOM05D000009 ORTHO05D000008 1.7e-11 73.9 180 32.2
FAN18G4011 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.7e-11 73.9 180 32.2
TAR629G0687 Trochodendron aralioides HOM05D000009 ORTHO05D000008 3.7e-11 72.8 277 25.3
Aqoxy3G04222 Aquilegia oxysepala HOM05D000009 ORTHO05D000008 6.4e-11 72.0 260 26.2
Cc02_g36200 Coffea canephora HOM05D000009 ORTHO05D000008 1.1e-10 71.2 268 26.1
SGA_v2.0_scaffold69G23186 Striga asiatica HOM05D000009 ORTHO05D000008 3.2e-10 69.7 267 27.3
Aqoxy3G03482 Aquilegia oxysepala HOM05D000009 ORTHO05D000008 4.1e-10 69.3 260 25.0
Hma1.2p1_0984F.1_g244210 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 5.4e-10 68.9 267 25.8
arahy.Tifrunner.gnm1.ann1.S37TL9 Arachis hypogaea HOM05D000009 ORTHO05D000008 2.7e-09 66.6 187 28.9
Aqoxy2G00468 Aquilegia oxysepala HOM05D000009 ORTHO05D000008 4.6e-09 65.9 276 25.7
GSVIVG01031535001 Vitis vinifera HOM05D000009 ORTHO05D000008 5.0e-08 62.4 255 28.2
Nn5g27698 Nelumbo nucifera HOM05D000009 ORTHO05D000008 1.5e-07 60.8 187 26.7
Cc00_g31220 Coffea canephora HOM05D000009 ORTHO05D000008 1.9e-07 60.5 173 31.8
Nn6g34479 Nelumbo nucifera HOM05D000009 ORTHO05D000008 1.9e-07 60.5 285 24.2
QL05p033392 Quercus lobata HOM05D000009 ORTHO05D000008 1.9e-07 60.5 237 26.6
MD11G1069800 Malus domestica HOM05D000009 ORTHO05D000008 2.5e-07 60.1 282 26.6
TAR371G0754 Trochodendron aralioides HOM05D000009 ORTHO05D000008 2.5e-07 60.1 266 24.1
Aqoxy3G00488 Aquilegia oxysepala HOM05D000009 ORTHO05D000008 3.3e-07 59.7 274 23.0
Nn8g39880 Nelumbo nucifera HOM05D000009 ORTHO05D000008 3.3e-07 59.7 259 25.9
MD11G1067500 Malus domestica HOM05D000009 ORTHO05D000008 4.3e-07 59.3 269 25.7
Cc02_g29990 Coffea canephora HOM05D000009 ORTHO05D000008 9.5e-07 58.2 189 29.6
Atru.chr12.1225 Acer truncatum HOM05D000009 ORTHO05D000008 1.2e-06 57.8 276 24.3
Cc00_g22820 Coffea canephora HOM05D000009 ORTHO05D000008 1.2e-06 57.8 189 29.6
Cc02_g29910 Coffea canephora HOM05D000009 ORTHO05D000008 1.2e-06 57.8 189 30.2
Cc04_g14750 Coffea canephora HOM05D000009 ORTHO05D000008 1.6e-06 57.4 176 29.0
Prupe.2G046700 Prunus persica HOM05D000009 ORTHO05D000008 1.6e-06 57.4 244 24.6
Cc02_g29750 Coffea canephora HOM05D000009 ORTHO05D000008 2.1e-06 57.0 178 29.8
TAR623G0159 Trochodendron aralioides HOM05D000009 ORTHO05D000008 2.1e-06 57.0 283 26.5
Prupe.2G046900 Prunus persica HOM05D000009 ORTHO05D000008 2.8e-06 56.6 270 24.1
MD11G1070400 Malus domestica HOM05D000009 ORTHO05D000008 3.6e-06 56.2 276 22.5
Prupe.2G046400 Prunus persica HOM05D000009 ORTHO05D000008 3.6e-06 56.2 178 27.5
Duzib114G0851 Durio zibethinus HOM05D000009 ORTHO05D000008 4.7e-06 55.8 157 32.5
Duzib114G0890 Durio zibethinus HOM05D000009 ORTHO05D000008 4.7e-06 55.8 157 31.8
Nitab4.5_0000613g0070 Nicotiana tabacum HOM05D000009 ORTHO05D000008 4.7e-06 55.8 288 22.2
Nitab4.5_0011718g0040 Nicotiana tabacum HOM05D000009 ORTHO05D000008 4.7e-06 55.8 193 28.0
TAR623G0253 Trochodendron aralioides HOM05D000009 ORTHO05D000008 4.7e-06 55.8 189 31.2
Ca_22694_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 6.2e-06 55.5 278 25.2
MBI19_g02444_MAGBIO Magnolia biondii HOM05D000009 ORTHO05D000008 6.2e-06 55.5 245 23.7
Cc00_g16760 Coffea canephora HOM05D000009 ORTHO05D000008 8.1e-06 55.1 163 29.4


User provided reference genes

Program Settings