Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G1007 Fragaria x ananassa HOM05D008048 ORTHO05D010199 5.2e-46 187.6 109 100.0
FAN12G3146 Fragaria x ananassa HOM05D008048 ORTHO05D010199 5.2e-46 187.6 109 100.0
FvH4_4g04390 Fragaria vesca HOM05D008048 ORTHO05D010199 6.7e-46 187.2 108 100.0
FAN17G0666 Fragaria x ananassa HOM05D008048 ORTHO05D010199 1.5e-45 186.0 108 99.1
FAN22G2321 Fragaria x ananassa HOM05D008048 ORTHO05D010199 1.4e-43 179.5 108 96.3
RcHm_v2.0_Chr4g0394961 Rosa chinensis HOM05D008048 ORTHO05D010199 5.3e-43 177.6 108 82.4
Prupe.1G046300 Prunus persica HOM05D008048 ORTHO05D010199 1.9e-40 169.1 108 78.7
MD16G1225000 Malus domestica HOM05D008048 ORTHO05D010199 1.2e-39 166.4 108 75.0
Cfa014771 Carpinus fangiana HOM05D008048 ORTHO05D010199 3.3e-37 158.3 108 73.1
Haze_11446 Corylus avellana HOM05D008048 ORTHO05D010199 7.5e-37 157.1 108 72.2
TAR362G0870 Trochodendron aralioides HOM05D008048 ORTHO05D010199 7.5e-37 157.1 108 70.4
Dinv29814 Davidia involucrata HOM05D008048 ORTHO05D010199 2.8e-36 155.2 108 69.4
Nn1g02915 Nelumbo nucifera HOM05D008048 ORTHO05D010199 1.1e-35 153.3 108 68.5
COL.COLO4_15948 Corchorus olitorius HOM05D008048 ORTHO05D010199 7.0e-35 150.6 108 67.6
Aqoxy5G00167 Aquilegia oxysepala HOM05D008048 ORTHO05D010199 2.0e-34 149.1 108 66.7
Manes.15G044600 Manihot esculenta HOM05D008048 ORTHO05D010199 3.5e-34 148.3 108 66.7
MD13G1219500 Malus domestica HOM05D008048 ORTHO05D010199 4.5e-34 147.9 109 67.9
MELO3C023035.2 Cucumis melo HOM05D008048 ORTHO05D010199 7.7e-34 147.1 108 65.7
QL06p020732 Quercus lobata HOM05D008048 ORTHO05D010199 1.7e-33 146.0 108 65.7
Hma1.2p1_0385F.1_g141480 Hydrangea macrophylla HOM05D008048 ORTHO05D010199 2.9e-33 145.2 108 65.7
Lj6g0004811 Lotus japonicus HOM05D008048 ORTHO05D010199 3.8e-33 144.8 88 77.3
Thecc.04G262100 Theobroma cacao HOM05D008048 ORTHO05D010199 3.8e-33 144.8 108 65.7
Actinidia20832 Actinidia chinensis HOM05D008048 ORTHO05D010199 5.0e-33 144.4 108 64.8
CsaV3_2G012520 Cucumis sativus L. HOM05D008048 ORTHO05D010199 6.5e-33 144.1 108 64.8
Atru.chr4.1935 Acer truncatum HOM05D008048 ORTHO05D010199 1.5e-32 142.9 108 64.8
Lalb_Chr19g0128481 Lupinus albus HOM05D008048 ORTHO05D010199 2.1e-31 139.0 90 73.3
Psat6g106440 Pisum sativum HOM05D008048 ORTHO05D010199 2.1e-31 139.0 88 75.0
Sed0019169 Sechium edule HOM05D008048 ORTHO05D010199 2.7e-31 138.7 108 62.0
TPR.G28751 Trifolium pratense HOM05D008048 ORTHO05D010199 3.6e-31 138.3 88 75.0
Duzib151G0082 Durio zibethinus HOM05D008048 ORTHO05D010199 8.0e-31 137.1 108 61.1
Medtr1g045060 Medicago truncatula HOM05D008048 ORTHO05D010199 1.4e-30 136.3 90 73.3
SGA_v2.0_scaffold67G22704 Striga asiatica HOM05D008048 ORTHO05D010199 3.0e-30 135.2 106 63.2
Lsat_1_v5_gn_6_68700 Lactuca sativa HOM05D008048 ORTHO05D010199 5.2e-30 134.4 108 55.6
MBI07_g18713_MAGBIO Magnolia biondii HOM05D008048 ORTHO05D010199 5.2e-30 134.4 108 62.0
Ciclev10005562m.g Citrus clementina HOM05D008048 ORTHO05D010199 8.8e-30 133.7 88 72.7
Phvul.007G271100 Phaseolus vulgaris HOM05D008048 ORTHO05D010199 2.0e-29 132.5 88 73.9
VMungo0720G0410 Vigna mungo HOM05D008048 ORTHO05D010199 2.0e-29 132.5 88 68.2
MSTRG.4161 Avicennia marina HOM05D008048 ORTHO05D010199 2.6e-29 132.1 108 59.3
Sabra10G0040500 Salix brachista HOM05D008048 ORTHO05D010199 2.6e-29 132.1 89 73.0
Gohir.A01G025700 Gossypium hirsutum HOM05D008048 ORTHO05D010199 5.7e-29 131.0 108 57.4
Gorai.002G026300 Gossypium raimondii HOM05D008048 ORTHO05D010199 5.7e-29 131.0 108 57.4
Potri.010G067000 Populus trichocarpa HOM05D008048 ORTHO05D010199 7.5e-29 130.6 109 59.6
Sabra08G0130700 Salix brachista HOM05D008048 ORTHO05D010199 7.5e-29 130.6 89 73.0
Potri.008G170900 Populus trichocarpa HOM05D008048 ORTHO05D010199 1.3e-28 129.8 109 61.5
Gohir.D01G023415 Gossypium hirsutum HOM05D008048 ORTHO05D010199 2.2e-28 129.0 108 57.4
AUR62002183 Chenopodium quinoa HOM05D008048 ORTHO05D010199 2.8e-28 128.6 105 59.0
Migut.G00487 Erythranthe guttata HOM05D008048 ORTHO05D010199 8.3e-28 127.1 108 58.3
PGR004G1266 Punica granatum HOM05D008048 ORTHO05D010199 8.3e-28 127.1 110 63.6
Peaxi162Scf00033g00292 Petunia axillaris HOM05D008048 ORTHO05D010199 1.8e-27 125.9 107 56.1
Nitab4.5_0002709g0050 Nicotiana tabacum HOM05D008048 ORTHO05D010199 2.4e-27 125.6 107 57.9
PGSC0003DMG400017154 Solanum tuberosum HOM05D008048 ORTHO05D010199 2.4e-27 125.6 107 58.9
CAN.G220.87 Capsicum annuum HOM05D008048 ORTHO05D010199 9.1e-27 123.6 107 56.1
Solyc09g090560.2 Solanum lycopersicum HOM05D008048 ORTHO05D010199 1.2e-26 123.2 107 57.9
Sopen09g033500 Solanum pennellii HOM05D008048 ORTHO05D010199 1.6e-26 122.9 107 57.9
Ah.04g155360 Amaranthus hybridus HOM05D008048 ORTHO05D010199 1.7e-25 119.4 108 53.7
SalBow3G4414 Salvia bowleyana HOM05D008048 ORTHO05D010199 2.3e-25 119.0 106 55.7
CiPaw.02G108000 Carya illinoinensis HOM05D008048 ORTHO05D010199 1.1e-24 116.7 105 63.8
Sc25g0003600 Simmondsia chinensis HOM05D008048 ORTHO05D010199 2.5e-24 115.5 86 60.5
TWI73G0695 Tripterygium wilfordii HOM05D008048 ORTHO05D010199 1.2e-23 113.2 111 55.9
Glyma.20G086000 Glycine max HOM05D008048 ORTHO05D010199 5.4e-19 97.8 108 50.0
Cpa.g.sc44.13 Carica papaya HOM05D008048 ORTHO05D010199 5.4e-11 71.2 42 78.6
Rhsim04G0173500 Rhododendron simsii HOM05D008048 ORTHO05D010199 6.0e-10 67.8 41 78.0


User provided reference genes

Program Settings