Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G3090 Fragaria x ananassa HOM05D007520 ORTHO05D009417 1.2e-158 563.1 287 100.0
FAN12G3032 Fragaria x ananassa HOM05D007520 ORTHO05D009417 2.6e-158 562.0 287 99.7
FAN17G2852 Fragaria x ananassa HOM05D007520 ORTHO05D009417 1.3e-136 490.0 311 84.9
FvH4_4g26110 Fragaria vesca HOM05D007520 ORTHO05D009417 7.6e-97 357.8 202 92.1
RcHm_v2.0_Chr4g0433681 Rosa chinensis HOM05D007520 ORTHO05D009417 1.4e-90 337.0 202 87.6
Prupe.1G338000 Prunus persica HOM05D007520 ORTHO05D009417 2.1e-75 286.6 203 74.4
MD13G1015700 Malus domestica HOM05D007520 ORTHO05D009417 2.0e-73 280.0 201 73.6
FAN22G1570 Fragaria x ananassa HOM05D000296 ORTHO05D000175 3.4e-65 252.7 134 94.8
Duzib268G1867 Durio zibethinus HOM05D007520 ORTHO05D009417 1.0e-61 241.1 203 61.6
Gorai.008G169800 Gossypium raimondii HOM05D007520 ORTHO05D009417 1.8e-61 240.4 181 66.9
CANSAT78G2519 Cannabis sativa HOM05D007520 ORTHO05D009417 3.9e-61 239.2 190 66.3
Manes.17G089333 Manihot esculenta HOM05D007520 ORTHO05D009417 6.3e-59 231.9 177 68.9
Sed0012329 Sechium edule HOM05D007520 ORTHO05D009417 2.6e-57 226.5 202 57.4
Thecc.02G303900 Theobroma cacao HOM05D007520 ORTHO05D009417 3.4e-57 226.1 173 65.9
TWI53G0076 Tripterygium wilfordii HOM05D007520 ORTHO05D009417 5.9e-57 225.3 178 63.5
Lj2g0009613 Lotus japonicus HOM05D007520 ORTHO05D009417 1.0e-56 224.6 195 60.0
Nn4g24547 Nelumbo nucifera HOM05D007520 ORTHO05D009417 1.3e-56 224.2 189 61.4
CiPaw.06G058600 Carya illinoinensis HOM05D007520 ORTHO05D009417 6.5e-56 221.9 183 63.4
Migut.L00619 Erythranthe guttata HOM05D007520 ORTHO05D009417 1.4e-55 220.7 197 59.9
TAR374G0082 Trochodendron aralioides HOM05D000504 ORTHO05D000403 1.9e-55 220.3 166 67.5
Medtr1g038820 Medicago truncatula HOM05D007520 ORTHO05D009417 9.4e-55 218.0 193 60.1
TPR.G35527 Trifolium pratense HOM05D007520 ORTHO05D009417 1.2e-54 217.6 177 62.1
Psat6g100600 Pisum sativum HOM05D007520 ORTHO05D009417 2.1e-54 216.9 177 62.1
CsaV3_5G012990 Cucumis sativus L. HOM05D007520 ORTHO05D009417 6.1e-54 215.3 183 57.9
MELO3C020056.2 Cucumis melo HOM05D007520 ORTHO05D009417 1.4e-53 214.2 236 48.3
Thhalv10005705m.g Eutrema salsugineum HOM05D007520 ORTHO05D009417 2.3e-53 213.4 174 62.6
Aqoxy5G01264 Aquilegia oxysepala HOM05D007520 ORTHO05D009417 3.9e-53 212.6 203 54.7
Ciclev10016556m.g Citrus clementina HOM05D007520 ORTHO05D009417 5.1e-53 212.2 175 62.9
Actinidia11793 Actinidia chinensis HOM05D007520 ORTHO05D009417 2.0e-52 210.3 173 64.7
CAN.G1812.4 Capsicum annuum HOM05D007520 ORTHO05D009417 1.3e-51 207.6 180 60.0
COL.COLO4_27582 Corchorus olitorius HOM05D007520 ORTHO05D009417 1.3e-51 207.6 174 62.1
BraA06t27270Z Brassica rapa HOM05D007520 ORTHO05D009417 1.7e-51 207.2 174 60.9
PGR042G3173 Punica granatum HOM05D007520 ORTHO05D009417 1.7e-51 207.2 235 48.5
Sp2g13330 Schrenkiella parvula HOM05D007520 ORTHO05D009417 2.8e-51 206.5 174 60.9
Sopen04g032100 Solanum pennellii HOM05D007520 ORTHO05D009417 3.7e-51 206.1 177 59.3
Phvul.003G001900 Phaseolus vulgaris HOM05D007520 ORTHO05D009417 4.8e-51 205.7 204 53.4
PGSC0003DMG400041336 Solanum tuberosum HOM05D001905 ORTHO05D001820 4.8e-51 205.7 177 61.0
BolC7t43791H Brassica oleracea HOM05D007520 ORTHO05D009417 6.3e-51 205.3 174 59.8
THA.LOC104824117 Tarenaya hassleriana HOM05D007520 ORTHO05D009417 3.1e-50 203.0 172 57.0
Nitab4.5_0004339g0060 Nicotiana tabacum HOM05D007520 ORTHO05D009417 5.3e-50 202.2 199 57.3
Solyc04g078500.1 Solanum lycopersicum HOM05D007520 ORTHO05D009417 5.3e-50 202.2 177 59.3
Hma1.2p1_0095F.1_g047520 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 2.0e-49 200.3 151 69.5
AT2G01905 Arabidopsis thaliana HOM05D007520 ORTHO05D009417 3.5e-49 199.5 174 58.0
CARHR144480 Cardamine hirsuta HOM05D007520 ORTHO05D009417 3.5e-49 199.5 172 58.7
AL5G11020 Arabidopsis lyrata HOM05D007520 ORTHO05D009417 7.7e-49 198.4 174 57.5
PSO478G1043 Papaver somniferum HOM05D007520 ORTHO05D009417 7.7e-49 198.4 181 56.4
Nitab4.5_0010118g0020 Nicotiana tabacum HOM05D007520 ORTHO05D009417 1.3e-48 197.6 198 56.6
A06p43940 Brassica napus HOM05D007520 ORTHO05D009417 1.7e-48 197.2 174 59.2
C07p32740 Brassica napus HOM05D007520 ORTHO05D009417 2.2e-48 196.8 174 59.2
PSO017G5472 Papaver somniferum HOM05D007520 ORTHO05D009417 2.9e-48 196.4 176 58.5
ECA246G0416 Erigeron canadensis HOM05D007520 ORTHO05D009417 1.4e-47 194.1 195 54.9
QL03p039135 Quercus lobata HOM05D007520 ORTHO05D009417 1.9e-47 193.7 155 65.2
HanXRQChr12g0379401 Helianthus annuus HOM05D007520 ORTHO05D009417 4.7e-46 189.1 176 57.4
VMungo0251G1805 Vigna mungo HOM05D007520 ORTHO05D009417 8.0e-46 188.3 208 52.9
Atru.chr11.1007 Acer truncatum HOM05D007520 ORTHO05D009417 7.4e-44 181.8 134 67.9
Glyma.14G224300 Glycine max HOM05D007520 ORTHO05D009417 7.4e-44 181.8 155 60.6
Sc15g0004470 Simmondsia chinensis HOM05D007520 ORTHO05D009417 2.2e-43 180.3 172 52.3
SGA_v2.0_scaffold172G39028 Striga asiatica HOM05D007520 ORTHO05D009417 4.8e-43 179.1 180 53.3
Atru.BG.295.p Acer truncatum HOM05D007520 ORTHO05D009417 2.2e-40 170.2 130 66.2
BcaC06g31264 Brassica carinata HOM05D007520 ORTHO05D009417 2.9e-40 169.9 151 59.6
arahy.Tifrunner.gnm1.ann1.RL07R4 Arachis hypogaea HOM05D007520 ORTHO05D009417 5.0e-40 169.1 178 53.4
EL10Ac1g01972 Beta vulgaris HOM05D007520 ORTHO05D009417 1.1e-39 167.9 175 50.3
Ah.11g041100 Amaranthus hybridus HOM05D007520 ORTHO05D009417 2.5e-39 166.8 176 48.3
Aa31LG2G8010 Aethionema arabicum HOM05D007520 ORTHO05D009417 2.7e-38 163.3 178 51.7
Zm00001eb010100 Zea mays HOM05D007520 ORTHO05D009417 6.1e-38 162.2 157 50.3
GSVIVG01011595001 Vitis vinifera HOM05D007520 ORTHO05D009417 1.4e-37 161.0 112 71.4
Lalb_Chr10g0094861 Lupinus albus HOM05D007520 ORTHO05D009417 2.6e-36 156.8 155 52.3
Rhsim09G0085600 Rhododendron simsii HOM05D007520 ORTHO05D009417 4.4e-36 156.0 171 53.8
AUR62036879 Chenopodium quinoa HOM05D007520 ORTHO05D009417 2.8e-35 153.3 163 49.1
CSS0021820 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 1.1e-34 151.4 121 62.0
CSS0032687 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 1.1e-34 151.4 121 62.0
SalBow3G0394 Salvia bowleyana HOM05D007520 ORTHO05D009417 5.9e-33 145.6 116 65.5
SalBow4G2630 Salvia bowleyana HOM05D007520 ORTHO05D009417 5.9e-33 145.6 116 65.5
CSS0024703 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 1.2e-30 137.9 131 55.7
Gohir.D12G157000 Gossypium hirsutum HOM05D007520 ORTHO05D009417 1.0e-29 134.8 179 44.1
Lsat_1_v5_gn_5_170921 Lactuca sativa HOM05D007520 ORTHO05D009417 8.8e-29 131.7 149 47.0
DCAR_002655 Daucus carota HOM05D007520 ORTHO05D009417 1.2e-28 131.3 124 55.6
Carub.0005s0090 Capsella rubella HOM05D007520 ORTHO05D009417 5.7e-28 129.0 109 59.6
CSS0003025 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 9.8e-28 128.3 131 52.7
Gohir.A12G153900 Gossypium hirsutum HOM05D007520 ORTHO05D009417 1.3e-27 127.9 176 43.2
Hma1.2p1_0095F.1_g047530 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 2.2e-27 127.1 144 52.1
SalBow6G7185 Salvia bowleyana HOM05D007520 ORTHO05D009417 9.1e-26 121.7 96 65.6
SalBow2G3493 Salvia bowleyana HOM05D007520 ORTHO05D009417 1.5e-23 114.4 90 66.7
Dinv08902 Davidia involucrata HOM05D007520 ORTHO05D009417 4.7e-22 109.4 95 60.0
Lj3A859T72 Lonicera japonica HOM05D007520 ORTHO05D009417 4.7e-22 109.4 128 50.0
ClCG11G001000 Citrullus lanatus HOM05D007520 ORTHO05D009417 6.1e-22 109.0 133 45.9
HPP92_016407 Vanilla planifolia HOM05D007520 ORTHO05D009417 2.3e-21 107.1 115 47.8
Dinv08901 Davidia involucrata HOM05D007520 ORTHO05D009417 5.2e-21 105.9 72 72.2
CSS0008274 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 2.4e-18 97.1 66 71.2
Eucgr.B02652 Eucalyptus grandis HOM05D007520 ORTHO05D009417 5.4e-18 95.9 77 62.3
PGSC0003DMG400013121 Solanum tuberosum HOM05D007520 ORTHO05D009417 5.4e-18 95.9 84 57.1
CDE06G1244 Ceratophyllum demersum HOM05D007520 ORTHO05D009417 2.0e-17 94.0 103 47.6
GSVIVG01011596001 Vitis vinifera HOM05D007520 ORTHO05D009417 2.3e-16 90.5 59 72.9
HPP92_016406 Vanilla planifolia HOM05D007520 ORTHO05D009417 6.6e-16 89.0 76 60.5
MSTRG.8107 Avicennia marina HOM05D007520 ORTHO05D009417 8.6e-16 88.6 70 65.7
Cc11_g05730 Coffea canephora HOM05D007520 ORTHO05D009417 5.6e-15 85.9 58 70.7
AUR62026615 Chenopodium quinoa HOM05D007520 ORTHO05D009417 2.1e-14 84.0 101 41.6
Carub.0005s0089 Capsella rubella HOM05D007520 ORTHO05D009417 4.0e-13 79.7 64 60.9
AUR62032185 Chenopodium quinoa HOM05D007520 ORTHO05D009417 2.0e-12 77.4 91 40.7
Pp3c10_19450 Physcomitrium patens HOM05D007520 ORTHO05D009417 4.4e-12 76.3 122 32.0
MD17G1182100 Malus domestica HOM05D007520 ORTHO05D009417 3.0e-08 63.5 39 76.9
AUR62033544 Chenopodium quinoa HOM05D000122 ORTHO05D009417 2.5e-07 60.5 81 37.0


User provided reference genes

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