Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G2898 Fragaria x ananassa HOM05D008187 ORTHO05D009830 1.5e-121 439.5 213 100.0
FvH4_4g26140 Fragaria vesca HOM05D008187 ORTHO05D009830 1.2e-120 436.4 213 99.5
FAN12G2367 Fragaria x ananassa HOM05D008187 ORTHO05D009830 2.8e-120 435.3 213 99.1
FAN07G0781 Fragaria x ananassa HOM05D008187 ORTHO05D009830 1.1e-100 370.2 178 98.9
FAN22G0157 Fragaria x ananassa HOM05D008187 ORTHO05D009830 2.1e-99 365.9 178 98.3
FAN17G0865 Fragaria x ananassa HOM05D008187 ORTHO05D009830 6.2e-96 354.4 170 98.8
FAN17G0113 Fragaria x ananassa HOM05D008187 ORTHO05D009830 3.9e-74 282.0 133 99.2
MD13G1015500 Malus domestica HOM05D008187 ORTHO05D009830 1.7e-37 160.2 181 58.0
Glyma.05G137300 Glycine max HOM05D008187 ORTHO05D009830 3.7e-32 142.5 170 48.2
QL03p039185 Quercus lobata HOM05D008187 ORTHO05D009830 4.9e-32 142.1 180 48.9
Glyma.08G092600 Glycine max HOM05D008187 ORTHO05D009830 1.1e-31 141.0 175 48.0
MD16G1013000 Malus domestica HOM05D008187 ORTHO05D009830 4.1e-31 139.0 192 50.5
Phvul.002G184100 Phaseolus vulgaris HOM05D008187 ORTHO05D009830 2.0e-30 136.7 169 48.5
Prupe.1G338300 Prunus persica HOM05D008187 ORTHO05D009830 2.0e-30 136.7 185 48.1
Thecc.02G303500 Theobroma cacao HOM05D008187 ORTHO05D009830 2.7e-30 136.3 169 49.7
Manes.17G089700 Manihot esculenta HOM05D008187 ORTHO05D009830 3.5e-30 136.0 172 49.4
Lalb_Chr07g0187941 Lupinus albus HOM05D008187 ORTHO05D009830 1.0e-29 134.4 170 46.5
Dinv08898 Davidia involucrata HOM05D008187 ORTHO05D009830 5.0e-29 132.1 158 52.5
Lj4g0022895 Lotus japonicus HOM05D008187 ORTHO05D009830 2.5e-28 129.8 174 46.6
VMungo0251G0444 Vigna mungo HOM05D008187 ORTHO05D009830 1.2e-27 127.5 160 46.9
Ca_18193_v3 Cicer arietinum L. HOM05D008187 ORTHO05D009830 1.6e-27 127.1 171 46.8
GSVIVG01011592001 Vitis vinifera HOM05D008187 ORTHO05D009830 2.8e-27 126.3 173 49.1
Psat7g085360 Pisum sativum HOM05D008187 ORTHO05D009830 4.7e-27 125.6 169 46.2
CiPaw.05G158900 Carya illinoinensis HOM05D008187 ORTHO05D009830 1.8e-26 123.6 159 49.1
CSS0005647 Camellia sinensis var. sinensis HOM05D008187 ORTHO05D009830 2.3e-26 123.2 163 47.9
CiPaw.06G058400 Carya illinoinensis HOM05D008187 ORTHO05D009830 5.7e-25 118.6 156 46.8
TAR622G0296 Trochodendron aralioides HOM05D008187 ORTHO05D009830 6.4e-24 115.2 176 46.0
COL.COLO4_27577 Corchorus olitorius HOM05D008187 ORTHO05D009830 8.3e-24 114.8 170 45.9
Dinv20504 Davidia involucrata HOM05D008187 ORTHO05D009830 1.4e-23 114.0 136 50.7
Dinv20537 Davidia involucrata HOM05D008187 ORTHO05D009830 1.4e-23 114.0 136 50.7
Potri.010G101500 Populus trichocarpa HOM05D008187 ORTHO05D009830 3.2e-23 112.8 169 41.4
arahy.Tifrunner.gnm1.ann1.FUMC5T Arachis hypogaea HOM05D008187 ORTHO05D009830 9.2e-23 111.3 158 44.9
Manes.15G138900 Manihot esculenta HOM05D008187 ORTHO05D009830 2.0e-22 110.2 123 50.4
Hma1.2p1_0441F.1_g153840 Hydrangea macrophylla HOM05D008187 ORTHO05D009830 4.6e-22 109.0 158 44.3
Potri.008G140000 Populus trichocarpa HOM05D008187 ORTHO05D009830 4.6e-22 109.0 173 40.5
Ciclev10016789m.g Citrus clementina HOM05D008187 ORTHO05D009830 1.0e-21 107.8 177 45.2
Atru.chr11.1001 Acer truncatum HOM05D008187 ORTHO05D009830 3.0e-21 106.3 177 42.4
arahy.Tifrunner.gnm1.ann1.61TZTK Arachis hypogaea HOM05D008187 ORTHO05D009830 1.1e-20 104.4 121 52.1
Sabra10G0074300 Salix brachista HOM05D008187 ORTHO05D009830 2.5e-20 103.2 173 39.3
Sabra08G0106100 Salix brachista HOM05D008187 ORTHO05D009830 4.3e-20 102.4 174 40.2
TWI74G1547 Tripterygium wilfordii HOM05D008187 ORTHO05D009830 1.2e-17 94.4 123 48.8
Gorai.012G183500 Gossypium raimondii HOM05D008187 ORTHO05D009830 1.5e-17 94.0 154 41.6
Actinidia34059 Actinidia chinensis HOM05D008187 ORTHO05D009830 4.4e-17 92.4 121 43.8
TWI77G0539 Tripterygium wilfordii HOM05D008187 ORTHO05D009830 9.8e-17 91.3 143 43.4
Actinidia38421 Actinidia chinensis HOM05D008187 ORTHO05D009830 1.3e-16 90.9 117 43.6
CANSAT78G2356 Cannabis sativa HOM05D008187 ORTHO05D009830 2.2e-16 90.1 147 42.9
Gohir.D04G188100 Gossypium hirsutum HOM05D008187 ORTHO05D009830 8.3e-16 88.2 153 41.2
Rhsim09G0085300 Rhododendron simsii HOM05D008187 ORTHO05D009830 1.9e-15 87.0 178 37.1
Eucgr.B02651 Eucalyptus grandis HOM05D008187 ORTHO05D009830 5.4e-15 85.5 169 39.6
CsaV3_5G012950 Cucumis sativus L. HOM05D008187 ORTHO05D009830 1.2e-14 84.3 127 45.7
ClCG11G000980 Citrullus lanatus HOM05D008187 ORTHO05D009830 1.6e-14 84.0 128 43.8
Gohir.A04G143800 Gossypium hirsutum HOM05D008187 ORTHO05D009830 3.5e-14 82.8 149 40.3
MELO3C020063.2 Cucumis melo HOM05D008187 ORTHO05D009830 4.6e-14 82.4 127 44.1
Lj6A731T87 Lonicera japonica HOM05D008187 ORTHO05D009830 4.6e-14 82.4 124 44.4
Sed0002824 Sechium edule HOM05D008187 ORTHO05D009830 7.8e-14 81.6 152 40.8
DCAR_026822 Daucus carota HOM05D008187 ORTHO05D009830 3.0e-13 79.7 140 36.4
ECA234G1527 Erigeron canadensis HOM05D005481 ORTHO05D006779 5.6e-12 75.5 124 40.3
Haze_10807 Corylus avellana HOM05D008187 ORTHO05D009830 2.1e-11 73.6 51 70.6
DCAR_023540 Daucus carota HOM05D008187 ORTHO05D009830 2.8e-11 73.2 125 40.0
Haze_10806 Corylus avellana HOM05D008187 ORTHO05D009830 8.1e-11 71.6 79 49.4
Lsat_1_v5_gn_4_24181 Lactuca sativa HOM05D008187 ORTHO05D009830 1.5e-09 67.4 126 38.1
MBI19_g01917_MAGBIO Magnolia biondii HOM05D003603 ORTHO05D009830 2.0e-09 67.0 123 41.5
THA.LOC104805100 Tarenaya hassleriana HOM05D010619 ORTHO05D009830 2.0e-09 67.0 120 36.7
TPR.G11831 Trifolium pratense HOM05D008187 ORTHO05D009830 2.0e-09 67.0 140 37.9
TPR.G34432 Trifolium pratense HOM05D008187 ORTHO05D009830 5.8e-09 65.5 77 44.2
TAR374G1419 Trochodendron aralioides HOM05D003603 ORTHO05D009830 4.9e-08 62.4 111 41.4
HanXRQChr17g0566281 Helianthus annuus HOM05D008187 ORTHO05D009830 1.9e-07 60.5 104 38.5
C09p30500 Brassica napus HOM05D010619 ORTHO05D009830 2.4e-07 60.1 130 33.1
BolC9t55912H Brassica oleracea HOM05D010619 ORTHO05D009830 2.4e-07 60.1 130 33.1
CDE03G0025 Ceratophyllum demersum HOM05D003603 ORTHO05D004186 2.4e-07 60.1 52 53.8
CDE06G0200 Ceratophyllum demersum HOM05D003603 ORTHO05D004186 2.4e-07 60.1 52 53.8
CARHR144510 Cardamine hirsuta HOM05D010619 ORTHO05D009830 5.4e-07 58.9 127 29.9
Oeu062660.1 Olea europaea HOM05D008187 ORTHO05D009830 5.4e-07 58.9 67 49.3
BcaB07g30724 Brassica carinata HOM05D010619 ORTHO05D009830 7.1e-07 58.5 126 34.1
BcaC04g21548 Brassica carinata HOM05D010619 ORTHO05D009830 7.1e-07 58.5 130 32.3
Sp2g13350 Schrenkiella parvula HOM05D010619 ORTHO05D009830 9.2e-07 58.2 143 30.8
ATR0598G345 Amborella trichopoda HOM05D003603 ORTHO05D004186 2.7e-06 56.6 96 37.5
HanXRQChr16g0527611 Helianthus annuus HOM05D008187 ORTHO05D009830 2.7e-06 56.6 124 33.9
BcaC06g31262 Brassica carinata HOM05D010619 ORTHO05D009830 3.5e-06 56.2 124 31.5
Ah.12g055980 Amaranthus hybridus HOM05D003603 ORTHO05D004186 7.8e-06 55.1 125 33.6
ATR0829G136 Amborella trichopoda HOM05D003603 ORTHO05D004186 7.8e-06 55.1 53 49.1
AL5G11040 Arabidopsis lyrata HOM05D010619 ORTHO05D009830 7.8e-06 55.1 133 30.8
Nn3g18471 Nelumbo nucifera HOM05D008187 ORTHO05D009830 7.8e-06 55.1 191 30.9


User provided reference genes

Program Settings