Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 6.5e-146 520.8 276 100.0
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 6.1e-144 514.2 276 99.3
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.8e-140 502.7 276 96.4
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 4.5e-139 498.0 276 96.4
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 5.2e-135 484.6 275 92.7
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 2.0e-123 446.0 275 84.0
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 5.9e-123 444.5 275 83.3
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 6.8e-119 431.0 274 81.8
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 6.3e-117 424.5 276 79.3
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 4.1e-116 421.8 273 80.6
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 2.3e-114 416.0 273 79.1
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 2.5e-113 412.5 274 78.1
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 1.8e-111 406.4 266 77.1
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 5.2e-111 404.8 274 77.0
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 1.5e-110 403.3 271 76.4
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 2.0e-110 402.9 273 75.8
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 3.7e-109 398.7 273 75.1
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 4.9e-109 398.3 275 75.3
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 6.4e-109 397.9 266 76.3
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 1.4e-108 396.7 273 75.5
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 2.4e-108 396.0 274 74.8
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 3.2e-108 395.6 273 74.4
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 1.2e-107 393.7 275 72.7
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 3.5e-107 392.1 276 72.5
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 3.5e-107 392.1 273 74.7
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 1.3e-106 390.2 275 73.8
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 2.3e-106 389.4 275 71.6
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 2.3e-106 389.4 274 72.3
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 3.0e-106 389.0 272 73.2
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 7.3e-105 384.4 266 74.1
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 9.5e-105 384.0 273 71.4
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 9.5e-105 384.0 274 73.0
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.2e-104 383.6 268 73.5
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 1.6e-104 383.3 268 73.1
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 2.8e-104 382.5 274 72.6
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 3.6e-104 382.1 268 72.4
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 2.3e-103 379.4 275 69.5
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 5.2e-103 378.3 274 70.4
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 6.8e-103 377.9 274 71.5
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 1.2e-102 377.1 272 71.7
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 4.4e-102 375.2 268 71.6
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 5.8e-102 374.8 272 70.6
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 7.5e-102 374.4 269 72.9
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 1.7e-101 373.2 265 72.5
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 1.4e-100 370.2 270 69.3
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 1.9e-100 369.8 274 68.2
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 1.9e-100 369.8 273 70.7
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 1.9e-100 369.8 274 68.6
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 3.2e-100 369.0 272 68.4
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 7.0e-100 367.9 278 70.5
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 9.2e-100 367.5 273 70.0
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 1.2e-99 367.1 274 67.9
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 2.0e-99 366.3 273 69.6
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 2.0e-99 366.3 272 68.4
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 2.7e-99 365.9 268 70.1
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 2.7e-99 365.9 325 61.8
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 6.0e-99 364.8 278 70.1
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 7.8e-99 364.4 275 68.7
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 7.8e-99 364.4 277 68.2
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 1.3e-98 363.6 266 68.8
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 2.3e-98 362.8 273 69.2
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 2.3e-98 362.8 273 69.2
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 3.0e-98 362.5 277 68.6
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 3.9e-98 362.1 275 66.9
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 3.9e-98 362.1 269 71.7
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 8.6e-98 360.9 278 68.3
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 2.5e-97 359.4 243 77.4
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 4.3e-97 358.6 275 69.5
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 9.5e-97 357.5 268 69.8
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 9.5e-97 357.5 274 67.5
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 2.1e-96 356.3 274 70.4
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 3.6e-96 355.5 241 78.0
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 1.8e-95 353.2 276 68.1
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 3.1e-95 352.4 270 69.3
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 9.9e-94 347.4 274 66.4
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 1.3e-93 347.1 273 67.8
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 1.7e-93 346.7 288 64.9
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 4.9e-93 345.1 269 68.0
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 1.9e-92 343.2 267 67.0
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 2.4e-92 342.8 276 66.3
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 7.1e-92 341.3 282 66.3
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 7.1e-92 341.3 282 66.0
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 2.7e-91 339.3 264 67.4
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 4.6e-91 338.6 234 73.1
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 6.0e-91 338.2 273 65.2
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 3.0e-90 335.9 265 64.5
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 6.6e-90 334.7 273 62.3
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 1.2e-88 330.5 266 64.3
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 3.6e-88 328.9 225 76.9
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 2.4e-87 326.2 266 61.7
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 2.9e-85 319.3 274 61.7
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 4.1e-84 315.5 266 62.0
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 7.1e-84 314.7 272 60.7
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 4.6e-83 312.0 259 60.6
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 3.9e-82 308.9 240 66.7
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 1.1e-81 307.4 224 69.6
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 6.2e-80 301.6 236 64.8
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 2.0e-78 296.6 266 60.2
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 1.3e-77 293.9 240 63.8
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 8.7e-74 281.2 391 43.5
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.9e-73 280.0 268 56.7
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 4.9e-69 265.4 268 54.1
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 2.7e-67 259.6 228 61.8
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 1.3e-66 257.3 269 53.2
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 3.8e-61 239.2 149 81.9
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 1.3e-53 214.2 184 65.8
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-50 204.1 137 70.8
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 1.5e-49 200.7 220 52.7
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 1.3e-48 197.6 183 63.9
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 2.5e-44 183.3 144 64.6
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 1.1e-41 174.5 140 57.1
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 1.5e-41 174.1 217 47.0
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 4.1e-39 166.0 120 72.5
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 2.5e-36 156.8 133 63.2
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 1.5e-30 137.5 137 59.1
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.0e-29 134.8 80 95.0
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 1.3e-29 134.4 209 44.5
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 2.5e-28 130.2 119 60.5
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 2.1e-27 127.1 133 59.4
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 5.5e-20 102.4 248 32.7
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 1.2e-19 101.3 80 65.0
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 1.6e-11 74.3 108 42.6
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 1.2e-06 58.2 50 52.0


User provided reference genes

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