Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G2634 Fragaria x ananassa HOM05D027852 ORTHO05D014615 3.9e-162 574.7 283 100.0
RcHm_v2.0_Chr4g0430571 Rosa chinensis HOM05D014495 ORTHO05D014615 7.6e-57 224.9 274 48.9
FAN07G0170 Fragaria x ananassa HOM05D027852 ORTHO05D014615 2.8e-51 206.5 132 78.0
FAN17G2353 Fragaria x ananassa HOM05D014495 ORTHO05D014615 2.4e-39 166.8 226 50.0
FAN07G1931 Fragaria x ananassa HOM05D014495 ORTHO05D014615 9.0e-34 148.3 98 76.5
FAN22G2091 Fragaria x ananassa HOM05D014495 ORTHO05D014615 2.9e-32 143.3 147 55.8
FAN17G0499 Fragaria x ananassa HOM05D027852 ORTHO05D014615 7.9e-22 108.6 110 53.6
Prupe.1G228000 Prunus persica HOM05D000151 ORTHO05D000074 1.1e-20 104.8 238 34.5
Prupe.1G227500 Prunus persica HOM05D000151 ORTHO05D000074 2.5e-20 103.6 191 37.2
Prupe.1G227900 Prunus persica HOM05D000151 ORTHO05D000074 3.3e-20 103.2 242 36.8
Prupe.1G050400 Prunus persica HOM05D000151 ORTHO05D000074 5.7e-20 102.4 241 33.6
MD13G1117600 Malus domestica HOM05D000151 ORTHO05D000074 2.2e-19 100.5 284 32.4
RcHm_v2.0_Chr4g0395201 Rosa chinensis HOM05D000151 ORTHO05D000074 2.4e-18 97.1 249 32.1
FAN07G0554 Fragaria x ananassa HOM05D027852 ORTHO05D014615 2.6e-17 93.6 116 51.7
Prupe.1G228100 Prunus persica HOM05D000151 ORTHO05D000074 5.9e-17 92.4 221 36.7
FvH4_4g30091 Fragaria vesca HOM05D022879 ORTHO05D000074 5.0e-16 89.4 263 28.5
FAN22G0511 Fragaria x ananassa HOM05D022879 ORTHO05D000074 1.1e-15 88.2 261 29.5
FvH4_3g43771 Fragaria vesca HOM05D022879 ORTHO05D000074 9.4e-15 85.1 286 28.3
FvH4_4g04480 Fragaria vesca HOM05D000151 ORTHO05D000074 1.6e-14 84.3 248 29.8
MD13G1223500 Malus domestica HOM05D000151 ORTHO05D000074 4.6e-14 82.8 209 34.0
RcHm_v2.0_Chr6g0254481 Rosa chinensis HOM05D000151 ORTHO05D000074 4.6e-14 82.8 259 30.1
RcHm_v2.0_Chr6g0254461 Rosa chinensis HOM05D000151 ORTHO05D000074 7.9e-14 82.0 235 29.8
FAN12G2073 Fragaria x ananassa HOM05D004442 ORTHO05D002066 2.3e-13 80.5 247 29.1
FvH4_4g05011 Fragaria vesca HOM05D000151 ORTHO05D000074 1.5e-12 77.8 228 26.3
FAN22G0114 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.3e-12 76.6 225 25.3
CSS0028834 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 4.3e-12 76.3 200 29.0
CSS0038976 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 4.3e-12 76.3 200 29.0
RcHm_v2.0_Chr3g0452431 Rosa chinensis HOM05D000151 ORTHO05D000074 5.7e-12 75.9 239 29.3
QL04p009352 Quercus lobata HOM05D000151 ORTHO05D000074 2.8e-11 73.6 205 31.7
Prupe.6G285500 Prunus persica HOM05D000151 ORTHO05D000074 3.7e-11 73.2 210 31.4
TWI09G1230 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 8.2e-11 72.0 267 24.0
QL04p008960 Quercus lobata HOM05D000151 ORTHO05D000074 3.1e-10 70.1 205 30.7
Cfa008697 Carpinus fangiana HOM05D000151 ORTHO05D000074 5.3e-10 69.3 208 26.0
QL04p019119 Quercus lobata HOM05D000151 ORTHO05D000074 6.9e-10 68.9 205 30.7
Aqoxy7G01146 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.2e-09 68.2 230 25.2
FvH4_7g10560 Fragaria vesca HOM05D000151 ORTHO05D000074 2.0e-09 67.4 259 32.4
QL05p064445 Quercus lobata HOM05D000151 ORTHO05D000074 2.0e-09 67.4 251 25.1
RcHm_v2.0_Chr1g0339581 Rosa chinensis HOM05D000151 ORTHO05D000074 2.0e-09 67.4 254 26.0
Aqoxy7G00553 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.6e-09 67.0 234 24.8
FAN17G1827 Fragaria x ananassa HOM05D000151 ORTHO05D000074 7.7e-09 65.5 249 28.1
FAN22G1059 Fragaria x ananassa HOM05D000151 ORTHO05D000074 7.7e-09 65.5 251 27.5
arahy.Tifrunner.gnm1.ann1.65DGHI Arachis hypogaea HOM05D000151 ORTHO05D000074 1.0e-08 65.1 293 25.9
arahy.Tifrunner.gnm1.ann1.F1QGJW Arachis hypogaea HOM05D000151 ORTHO05D000074 1.0e-08 65.1 293 25.9
arahy.Tifrunner.gnm1.ann1.2H6W8Q Arachis hypogaea HOM05D000151 ORTHO05D000074 5.0e-08 62.8 294 25.5
arahy.Tifrunner.gnm1.ann1.F20K0V Arachis hypogaea HOM05D000151 ORTHO05D000074 5.0e-08 62.8 294 25.5
Nn1g04501 Nelumbo nucifera HOM05D000151 ORTHO05D000074 5.0e-08 62.8 175 27.4
PSO170G4594 Papaver somniferum HOM05D000151 ORTHO05D000074 8.5e-08 62.0 273 25.6
FvH4_4g26320 Fragaria vesca HOM05D000151 ORTHO05D000074 1.4e-07 61.2 252 27.4
FvH4_3g40651 Fragaria vesca HOM05D019358 ORTHO05D000074 1.9e-07 60.8 192 31.8
Manes.05G141800 Manihot esculenta HOM05D000151 ORTHO05D000074 2.5e-07 60.5 267 24.3
QL01p002550 Quercus lobata HOM05D000151 ORTHO05D000074 2.5e-07 60.5 270 24.1
FAN16G2275 Fragaria x ananassa HOM05D019358 ORTHO05D000074 3.2e-07 60.1 193 31.1
TAR626G1895 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.2e-07 60.1 218 24.8
Gohir.A05G410900 Gossypium hirsutum HOM05D000151 ORTHO05D000074 4.2e-07 59.7 282 24.8
CiPaw.08G069900 Carya illinoinensis HOM05D000151 ORTHO05D000074 7.2e-07 58.9 248 24.6
Cfa014025 Carpinus fangiana HOM05D000151 ORTHO05D000074 9.4e-07 58.5 270 24.1
Eucgr.H00114 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.2e-06 58.2 209 23.0
Haze_02452 Corylus avellana HOM05D000151 ORTHO05D000074 1.6e-06 57.8 267 26.6
MBI06_g17230_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 1.6e-06 57.8 266 24.1
Lj7P286T29 Lonicera japonica HOM05D000151 ORTHO05D000074 2.1e-06 57.4 255 23.9
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 2.7e-06 57.0 245 25.3
Prupe.1G050500 Prunus persica HOM05D000151 ORTHO05D000074 3.6e-06 56.6 171 30.4
TWI31G0065 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 3.6e-06 56.6 245 26.1
QL08p055347 Quercus lobata HOM05D000151 ORTHO05D000074 6.1e-06 55.8 183 27.9


User provided reference genes

Program Settings