Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_4g16860 Fragaria vesca HOM05D007734 ORTHO05D009807 3.5e-49 198.0 100 100.0
FAN12G2573 Fragaria x ananassa HOM05D007734 ORTHO05D009807 3.5e-49 198.0 100 100.0
FAN12G0936 Fragaria x ananassa HOM05D007734 ORTHO05D009807 2.3e-48 195.3 100 98.0
FAN17G2648 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.8e-45 185.7 100 94.0
FAN07G1074 Fragaria x ananassa HOM05D007734 ORTHO05D009807 5.2e-45 184.1 100 93.0
RcHm_v2.0_Chr4g0420431 Rosa chinensis HOM05D007734 ORTHO05D009807 4.6e-41 171.0 92 91.3
MD13G1176100 Malus domestica HOM05D007734 ORTHO05D009807 2.4e-34 148.7 94 78.7
MD16G1177900 Malus domestica HOM05D007734 ORTHO05D009807 4.6e-33 144.4 94 76.6
CiPaw.02G088300 Carya illinoinensis HOM05D007734 ORTHO05D009807 1.0e-32 143.3 94 72.3
Prupe.1G145200 Prunus persica HOM05D007734 ORTHO05D009807 3.9e-32 141.4 94 74.5
CANSAT78G1562 Cannabis sativa HOM05D007734 ORTHO05D009807 8.7e-32 140.2 91 72.5
CiPaw.01G155700 Carya illinoinensis HOM05D007734 ORTHO05D009807 8.7e-32 140.2 92 71.7
QL06p006592 Quercus lobata HOM05D007734 ORTHO05D009807 4.3e-31 137.9 89 75.3
MELO3C021378.2 Cucumis melo HOM05D007734 ORTHO05D009807 2.1e-30 135.6 91 71.4
CsaV3_6G005600 Cucumis sativus L. HOM05D007734 ORTHO05D009807 3.6e-30 134.8 91 71.4
ClCG06G005560 Citrullus lanatus HOM05D007734 ORTHO05D009807 6.2e-30 134.0 91 71.4
Lj4g0025137 Lotus japonicus HOM05D007734 ORTHO05D009807 1.1e-29 133.3 97 66.0
TWI73G0877 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 1.1e-29 133.3 91 70.3
Hma1.2p1_0643F.1_g194590 Hydrangea macrophylla HOM05D007734 ORTHO05D009807 4.0e-29 131.3 86 66.3
Glyma.07G252900 Glycine max HOM05D007734 ORTHO05D009807 5.3e-29 131.0 100 63.0
Glyma.17G021500 Glycine max HOM05D007734 ORTHO05D009807 1.2e-28 129.8 100 62.0
Sed0021110 Sechium edule HOM05D007734 ORTHO05D009807 1.5e-28 129.4 89 70.8
Duzib151G0459 Durio zibethinus HOM05D007734 ORTHO05D009807 5.8e-28 127.5 90 67.8
Nn4g26101 Nelumbo nucifera HOM05D007734 ORTHO05D009807 5.8e-28 127.5 91 71.4
Haze_01029 Corylus avellana HOM05D007734 ORTHO05D009807 7.6e-28 127.1 89 69.7
Migut.G00233 Erythranthe guttata HOM05D007734 ORTHO05D009807 7.6e-28 127.1 92 64.1
Phvul.003G099200 Phaseolus vulgaris HOM05D007734 ORTHO05D009807 7.6e-28 127.1 100 60.0
Atru.chr4.2717 Acer truncatum HOM05D007734 ORTHO05D009807 9.9e-28 126.7 88 67.0
Eucgr.H03661 Eucalyptus grandis HOM05D007734 ORTHO05D009807 9.9e-28 126.7 88 65.9
Sed0016523 Sechium edule HOM05D007734 ORTHO05D009807 9.9e-28 126.7 91 69.2
TAR365G0453 Trochodendron aralioides HOM05D007734 ORTHO05D009807 9.9e-28 126.7 91 69.2
TWI09G1295 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 1.7e-27 125.9 90 71.1
Cfa015520 Carpinus fangiana HOM05D007734 ORTHO05D009807 2.9e-27 125.2 89 68.5
Manes.03G189200 Manihot esculenta HOM05D007734 ORTHO05D009807 3.8e-27 124.8 90 67.8
GSVIVG01017837001 Vitis vinifera HOM05D007734 ORTHO05D009807 3.8e-27 124.8 89 62.9
Ciclev10007097m.g Citrus clementina HOM05D007734 ORTHO05D009807 8.4e-27 123.6 89 65.2
SGA_v2.0_scaffold142G35667 Striga asiatica HOM05D007734 ORTHO05D009807 8.4e-27 123.6 92 62.0
Thecc.04G274000 Theobroma cacao HOM05D007734 ORTHO05D009807 4.2e-26 121.3 90 64.4
Gohir.D10G164200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 5.4e-26 120.9 90 65.6
Gorai.011G183300 Gossypium raimondii HOM05D007734 ORTHO05D009807 5.4e-26 120.9 90 65.6
Sabra08G0163100 Salix brachista HOM05D007734 ORTHO05D009807 5.4e-26 120.9 77 72.7
AT5G18850 Arabidopsis thaliana HOM05D007734 ORTHO05D009807 1.6e-25 119.4 90 63.3
arahy.Tifrunner.gnm1.ann1.80YKV9 Arachis hypogaea HOM05D007734 ORTHO05D009807 1.6e-25 119.4 89 64.0
BraA03t10238Z Brassica rapa HOM05D007734 ORTHO05D009807 2.1e-25 119.0 92 63.0
Duzib052G0038 Durio zibethinus HOM05D007734 ORTHO05D009807 2.1e-25 119.0 90 65.6
arahy.Tifrunner.gnm1.ann1.F9B3QK Arachis hypogaea HOM05D007734 ORTHO05D009807 4.6e-25 117.9 89 64.0
Thhalv10015120m.g Eutrema salsugineum HOM05D007734 ORTHO05D009807 4.6e-25 117.9 89 64.0
Carub.0006s1717 Capsella rubella HOM05D007734 ORTHO05D009807 6.0e-25 117.5 92 64.1
Aa31LG11G10850 Aethionema arabicum HOM05D007734 ORTHO05D009807 7.8e-25 117.1 91 60.4
AL6G30210 Arabidopsis lyrata HOM05D007734 ORTHO05D009807 7.8e-25 117.1 90 63.3
CARHR194160 Cardamine hirsuta HOM05D007734 ORTHO05D009807 7.8e-25 117.1 89 64.0
Oeu044804.1 Olea europaea HOM05D007734 ORTHO05D009807 7.8e-25 117.1 92 62.0
Gohir.A10G104500 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.0e-24 116.7 90 63.3
Potri.010G026900 Populus trichocarpa HOM05D007734 ORTHO05D009807 1.0e-24 116.7 78 70.5
PSO302G0168 Papaver somniferum HOM05D007734 ORTHO05D009807 1.3e-24 116.3 92 62.0
Potri.008G197300 Populus trichocarpa HOM05D007734 ORTHO05D009807 1.3e-24 116.3 77 70.1
BcaB01g05276 Brassica carinata HOM05D007734 ORTHO05D009807 1.7e-24 115.9 92 60.9
C03p10680 Brassica napus HOM05D007734 ORTHO05D009807 1.7e-24 115.9 92 60.9
BolC3t13544H Brassica oleracea HOM05D007734 ORTHO05D009807 1.7e-24 115.9 92 60.9
Gorai.006G074800 Gossypium raimondii HOM05D007734 ORTHO05D009807 1.7e-24 115.9 90 60.0
Sp6g25520 Schrenkiella parvula HOM05D007734 ORTHO05D009807 3.9e-24 114.8 92 62.0
Gohir.D09G060100 Gossypium hirsutum HOM05D007734 ORTHO05D009807 5.1e-24 114.4 90 58.9
MBI19_g13511_MAGBIO Magnolia biondii HOM05D007734 ORTHO05D009807 5.1e-24 114.4 91 61.5
Gohir.A09G061200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 6.6e-24 114.0 90 60.0
Peaxi162Scf00095g00125 Petunia axillaris HOM05D007734 ORTHO05D009807 8.7e-24 113.6 92 57.6
Dinv44448 Davidia involucrata HOM05D007734 ORTHO05D009807 1.5e-23 112.8 91 61.5
CDE05G0384 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 1.9e-23 112.5 86 65.1
BcaB01g04888 Brassica carinata HOM05D007734 ORTHO05D009807 5.6e-23 110.9 92 59.8
CAN.G627.13 Capsicum annuum HOM05D007734 ORTHO05D009807 1.6e-22 109.4 92 57.6
CSS0028590 Camellia sinensis var. sinensis HOM05D007734 ORTHO05D009807 1.1e-21 106.7 89 55.1
MSTRG.3964 Avicennia marina HOM05D007734 ORTHO05D009807 1.8e-21 105.9 106 52.8
Cc03_g02610 Coffea canephora HOM05D007734 ORTHO05D009807 2.4e-21 105.5 89 60.7
PGSC0003DMG400032093 Solanum tuberosum HOM05D007734 ORTHO05D009807 3.1e-21 105.1 86 60.5
Ca_30429_v3 Cicer arietinum L. HOM05D007734 ORTHO05D009807 6.9e-21 104.0 71 64.8
Solyc01g080590.3 Solanum lycopersicum HOM05D007734 ORTHO05D009807 1.5e-20 102.8 86 58.1
Lalb_Chr07g0177521 Lupinus albus HOM05D007734 ORTHO05D009807 3.4e-20 101.7 69 65.2
Sopen01g032410 Solanum pennellii HOM05D007734 ORTHO05D009807 3.4e-20 101.7 86 57.0
ATR0487G018 Amborella trichopoda HOM05D007734 ORTHO05D009807 5.8e-20 100.9 91 58.2
Actinidia40206 Actinidia chinensis HOM05D007734 ORTHO05D009807 9.9e-20 100.1 89 53.9
CDE05G0036 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 2.2e-19 99.0 63 73.0
Nitab4.5_0009396g0030 Nicotiana tabacum HOM05D007734 ORTHO05D009807 4.9e-19 97.8 72 61.1
Psat4g030040 Pisum sativum HOM05D007734 ORTHO05D009807 8.4e-19 97.1 65 64.6
FAN22G2010 Fragaria x ananassa HOM05D007734 ORTHO05D001690 3.2e-18 95.1 49 98.0
THA.LOC104818832 Tarenaya hassleriana HOM05D002550 ORTHO05D003420 4.2e-18 94.7 73 58.9
SEGI_32711 Sequoiadendron giganteum HOM05D007734 ORTHO05D009807 7.4e-15 84.0 93 44.1
Aqoxy5G00589 Aquilegia oxysepala HOM05D007734 ORTHO05D009807 1.2e-12 76.6 79 49.4
Sc13g0003750 Simmondsia chinensis HOM05D007734 ORTHO05D009807 1.7e-11 72.8 50 62.0
A03p09150 Brassica napus HOM05D007734 ORTHO05D009807 1.2e-09 66.6 51 58.8
Nitab4.5_0000059g0330 Nicotiana tabacum HOM05D007734 ORTHO05D009807 3.5e-09 65.1 55 52.7
Actinidia00065 Actinidia chinensis HOM05D007734 ORTHO05D009807 1.8e-08 62.8 89 41.6
BcaB08g36639 Brassica carinata HOM05D007734 ORTHO05D009807 9.6e-07 57.0 41 58.5
A10p20780 Brassica napus HOM05D007734 ORTHO05D009807 3.7e-06 55.1 46 60.9


User provided reference genes

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