Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G2568 Fragaria x ananassa HOM05D007903 ORTHO05D009925 1.5e-89 332.8 169 100.0
FvH4_4g27040 Fragaria vesca HOM05D007903 ORTHO05D009925 2.3e-85 318.9 169 96.4
FAN12G1984 Fragaria x ananassa HOM05D007903 ORTHO05D009925 2.3e-85 318.9 169 96.4
FAN22G0942 Fragaria x ananassa HOM05D007903 ORTHO05D009925 1.2e-81 306.6 170 92.9
FAN07G0160 Fragaria x ananassa HOM05D007903 ORTHO05D009925 8.5e-80 300.4 168 92.3
FAN17G2767 Fragaria x ananassa HOM05D007903 ORTHO05D009925 3.6e-78 295.0 170 91.2
RcHm_v2.0_Chr4g0434841 Rosa chinensis HOM05D007903 ORTHO05D009925 8.8e-77 290.4 169 87.0
Prupe.1G313800 Prunus persica HOM05D007903 ORTHO05D009925 1.8e-42 176.4 173 59.0
MD13G1039400 Malus domestica HOM05D007903 ORTHO05D009925 1.2e-41 173.7 175 60.0
MD16G1040300 Malus domestica HOM05D007903 ORTHO05D009925 2.3e-40 169.5 175 56.0
CiPaw.05G239700 Carya illinoinensis HOM05D007903 ORTHO05D009925 1.9e-31 139.8 172 51.7
Hma1.2p1_1875F.1_g306260 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 3.4e-28 129.0 171 48.0
Cfa015866 Carpinus fangiana HOM05D007903 ORTHO05D009925 7.5e-28 127.9 172 47.7
Haze_00633 Corylus avellana HOM05D007903 ORTHO05D009925 1.4e-26 123.6 172 45.9
Aqoxy3G00252 Aquilegia oxysepala HOM05D007903 ORTHO05D009925 1.9e-26 123.2 176 42.0
Hma1.2p1_2787F.1_g328510 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 2.4e-26 122.9 130 53.1
Nn4g23903 Nelumbo nucifera HOM05D007903 ORTHO05D009925 4.6e-25 118.6 178 40.4
Potri.010G122600 Populus trichocarpa HOM05D007903 ORTHO05D009925 6.0e-25 118.2 173 45.7
TAR374G1449 Trochodendron aralioides HOM05D007903 ORTHO05D009925 6.0e-25 118.2 173 43.4
CSS0015489 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 2.3e-24 116.3 160 46.2
Potri.008G122700 Populus trichocarpa HOM05D007903 ORTHO05D009925 1.2e-22 110.5 173 41.6
QL01p040711 Quercus lobata HOM05D007903 ORTHO05D009925 1.6e-22 110.2 135 45.9
Ciclev10017603m.g Citrus clementina HOM05D007903 ORTHO05D009925 2.1e-22 109.8 182 39.6
Sabra10G0092700 Salix brachista HOM05D007903 ORTHO05D009925 2.8e-22 109.4 175 44.0
Thecc.02G225400 Theobroma cacao HOM05D007903 ORTHO05D009925 1.4e-21 107.1 175 40.0
PGSC0003DMG400006002 Solanum tuberosum HOM05D007903 ORTHO05D009925 4.4e-20 102.1 179 38.0
TWI31G0067 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 9.8e-20 100.9 176 39.2
Lalb_Chr06g0165971 Lupinus albus HOM05D007903 ORTHO05D009925 6.4e-19 98.2 169 38.5
Oeu057730.1 Olea europaea HOM05D007903 ORTHO05D009925 1.4e-18 97.1 159 37.1
ClCG05G022570 Citrullus lanatus HOM05D007903 ORTHO05D009925 9.2e-18 94.4 134 42.5
Manes.14G104700 Manihot esculenta HOM05D007903 ORTHO05D009925 1.2e-17 94.0 174 40.8
CAN.G25.18 Capsicum annuum HOM05D007903 ORTHO05D009925 2.7e-17 92.8 174 36.8
Duzib268G0450 Durio zibethinus HOM05D007903 ORTHO05D009925 2.7e-17 92.8 180 39.4
CsaV3_5G034450 Cucumis sativus L. HOM05D007903 ORTHO05D009925 4.6e-17 92.0 171 37.4
Gohir.A09G042700 Gossypium hirsutum HOM05D007903 ORTHO05D009925 7.8e-17 91.3 179 37.4
Sabra08G0093200 Salix brachista HOM05D007903 ORTHO05D009925 1.0e-16 90.9 160 38.1
Lj5g0001705 Lotus japonicus HOM05D007903 ORTHO05D009925 1.3e-16 90.5 177 39.5
PGR119G1971 Punica granatum HOM05D007903 ORTHO05D009925 3.9e-16 89.0 161 42.2
Solyc04g007360.1 Solanum lycopersicum HOM05D007903 ORTHO05D009925 6.6e-16 88.2 179 34.1
Gohir.D09G043400 Gossypium hirsutum HOM05D007903 ORTHO05D009925 8.6e-16 87.8 179 36.3
Gorai.006G050300 Gossypium raimondii HOM05D007903 ORTHO05D009925 8.6e-16 87.8 179 36.3
Sopen04g002420 Solanum pennellii HOM05D007903 ORTHO05D009925 1.5e-15 87.0 131 38.2
DCAR_030171 Daucus carota HOM05D007903 ORTHO05D009925 1.9e-15 86.7 175 32.0
Peaxi162Scf00564g00039 Petunia axillaris HOM05D007903 ORTHO05D009925 2.5e-15 86.3 117 41.0
Carub.0002s1485 Capsella rubella HOM05D007903 ORTHO05D009925 3.1e-13 79.3 177 34.5
CSS0009081 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 4.0e-13 79.0 163 37.4
Eucgr.G02306 Eucalyptus grandis HOM05D007903 ORTHO05D009925 4.0e-13 79.0 127 45.7
Sed0015064 Sechium edule HOM05D007903 ORTHO05D009925 5.2e-13 78.6 173 36.4
CANSAT01G0431 Cannabis sativa HOM05D007903 ORTHO05D009925 2.0e-12 76.6 194 32.5
COL.COLO4_08991 Corchorus olitorius HOM05D007903 ORTHO05D009925 2.6e-12 76.3 136 36.8
Thhalv10019802m.g Eutrema salsugineum HOM05D007903 ORTHO05D009925 3.4e-12 75.9 160 31.9
THA.LOC104821918 Tarenaya hassleriana HOM05D007903 ORTHO05D009925 3.4e-12 75.9 174 37.4
Sc04g0006190 Simmondsia chinensis HOM05D007903 ORTHO05D009925 9.9e-12 74.3 173 34.7
BcaB05g24366 Brassica carinata HOM05D007903 ORTHO05D009925 1.7e-11 73.6 133 36.1
Cpa.g.sc65.47 Carica papaya HOM05D007903 ORTHO05D009925 3.7e-11 72.4 171 33.3
Migut.E00359 Erythranthe guttata HOM05D007903 ORTHO05D009925 3.7e-11 72.4 162 36.4
Glyma.20G117500 Glycine max HOM05D007903 ORTHO05D009925 6.4e-11 71.6 165 37.0
CSS0036148 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 1.1e-10 70.9 162 36.4
Sp5g23400 Schrenkiella parvula HOM05D007903 ORTHO05D009925 3.2e-10 69.3 160 30.6
VMungo0720G0077 Vigna mungo HOM05D007903 ORTHO05D009925 4.1e-10 68.9 177 36.2
AL2G27200 Arabidopsis lyrata HOM05D007903 ORTHO05D009925 9.2e-10 67.8 174 31.0
Os01g0133200 Oryza sativa ssp. japonica HOM05D007903 ORTHO05D009925 1.2e-09 67.4 142 33.8
AT1G68350 Arabidopsis thaliana HOM05D007903 ORTHO05D009925 1.6e-09 67.0 177 31.1
HPP92_004796 Vanilla planifolia HOM05D007903 ORTHO05D009925 1.6e-09 67.0 145 30.3
BraA02t06557Z Brassica rapa HOM05D007903 ORTHO05D009925 2.1e-09 66.6 129 34.1
CARHR061060 Cardamine hirsuta HOM05D007903 ORTHO05D009925 2.7e-09 66.2 170 34.7
BcaC08g45975 Brassica carinata HOM05D007903 ORTHO05D009925 3.5e-09 65.9 133 30.8
C06p37650 Brassica napus HOM05D007903 ORTHO05D009925 3.5e-09 65.9 133 30.8
BolC6t38868H Brassica oleracea HOM05D007903 ORTHO05D009925 3.5e-09 65.9 133 30.8
BcaB03g15412 Brassica carinata HOM05D007903 ORTHO05D009925 4.6e-09 65.5 138 32.6
Zm00001eb125220 Zea mays HOM05D007903 ORTHO05D009925 8.6e-08 61.2 174 28.7
TWI79G1550 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 3.3e-07 59.3 150 32.0
Phvul.007G029300 Phaseolus vulgaris HOM05D007903 ORTHO05D009925 2.8e-06 56.2 175 36.0
EL10Ac6g14355 Beta vulgaris HOM05D007903 ORTHO05D009925 4.7e-06 55.5 156 32.1
Dinv31619 Davidia involucrata HOM05D007903 ORTHO05D009925 4.7e-06 55.5 76 51.3


User provided reference genes

Program Settings