Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.1e-156 556.6 284 100.0
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.9e-154 548.1 284 98.2
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.3e-152 543.1 283 97.9
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 4.8e-152 541.2 284 97.9
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 6.2e-152 540.8 284 97.5
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.8e-151 539.3 281 97.9
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 1.6e-147 526.2 284 93.0
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 6.1e-131 471.1 284 83.1
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 2.9e-125 452.2 283 79.5
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 8.5e-125 450.7 280 78.9
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 8.0e-123 444.1 281 78.6
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 2.3e-122 442.6 282 77.7
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 1.1e-121 440.3 283 77.7
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 4.1e-119 431.8 280 77.1
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 2.6e-118 429.1 283 76.0
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 3.5e-118 428.7 279 75.6
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 4.5e-118 428.3 281 74.4
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 7.7e-118 427.6 280 76.8
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 7.7e-118 427.6 283 76.7
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 1.0e-117 427.2 280 75.7
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 1.0e-117 427.2 280 76.8
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 1.0e-117 427.2 281 74.4
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 1.3e-117 426.8 281 74.7
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 1.7e-117 426.4 281 74.4
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 2.9e-117 425.6 280 73.9
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 2.9e-117 425.6 281 74.4
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 5.0e-117 424.9 283 76.3
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 8.5e-117 424.1 281 74.4
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 1.9e-116 422.9 286 74.5
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 2.5e-116 422.5 282 74.8
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 2.5e-116 422.5 300 71.0
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 3.2e-116 422.2 277 75.8
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 4.2e-116 421.8 281 74.0
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 4.2e-116 421.8 283 75.3
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 5.5e-116 421.4 281 75.1
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 5.5e-116 421.4 279 76.0
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 7.2e-116 421.0 281 74.0
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 7.2e-116 421.0 283 75.6
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 9.4e-116 420.6 283 74.9
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 1.2e-115 420.2 281 74.0
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 1.2e-115 420.2 282 74.8
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 1.6e-115 419.9 281 74.4
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 2.1e-115 419.5 283 73.5
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 2.7e-115 419.1 281 74.0
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 2.7e-115 419.1 281 73.7
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 1.0e-114 417.2 281 73.7
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 1.0e-114 417.2 281 73.7
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 2.3e-114 416.0 281 73.7
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 3.0e-114 415.6 281 73.7
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 3.0e-114 415.6 281 72.2
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 3.0e-114 415.6 283 72.4
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 4.0e-114 415.2 277 75.5
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 2.0e-113 412.9 275 76.0
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 3.4e-113 412.1 282 73.0
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 4.4e-113 411.8 274 75.2
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 4.4e-113 411.8 290 72.1
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 1.7e-112 409.8 274 71.9
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 6.3e-112 407.9 281 72.6
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 1.1e-111 407.1 277 74.0
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 1.8e-111 406.4 277 74.4
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 2.4e-111 406.0 277 73.6
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 3.1e-111 405.6 284 71.8
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 4.1e-111 405.2 277 73.6
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 9.1e-111 404.1 275 74.9
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 1.6e-110 403.3 278 73.0
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 2.7e-110 402.5 275 74.5
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 1.0e-109 400.6 281 73.0
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 2.2e-109 399.4 277 72.9
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 3.8e-109 398.7 281 70.8
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 5.5e-108 394.8 281 71.9
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 2.1e-107 392.9 274 73.0
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 8.0e-107 391.0 278 69.8
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 9.8e-105 384.0 273 69.2
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 1.3e-104 383.6 282 70.6
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 8.3e-104 380.9 279 69.2
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 1.1e-103 380.6 292 66.1
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 9.1e-103 377.5 285 69.8
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 1.2e-102 377.1 251 74.9
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 1.2e-102 377.1 259 73.4
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 1.3e-101 373.6 272 70.2
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 6.6e-101 371.3 380 55.3
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 5.6e-100 368.2 277 69.3
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 1.6e-99 366.7 284 66.9
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 2.3e-98 362.8 278 66.5
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 1.5e-92 343.6 277 66.1
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 2.5e-92 342.8 344 57.0
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 2.8e-91 339.3 278 63.7
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 6.0e-86 321.6 270 62.6
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 1.0e-85 320.9 281 60.5
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 2.0e-81 306.6 304 55.6
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 4.4e-81 305.4 273 58.2
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 8.3e-80 301.2 306 56.2
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 2.4e-79 299.7 208 74.5
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 3.5e-78 295.8 274 57.7
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 5.4e-71 271.9 276 54.0
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 1.4e-66 257.3 299 49.8
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 1.8e-66 256.9 188 69.1
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 2.6e-65 253.1 275 52.7
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 1.3e-51 207.6 271 44.3
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.3e-48 197.6 104 95.2
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 7.9e-46 188.3 234 45.3
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 1.8e-45 187.2 165 61.8
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 7.1e-39 165.2 120 62.5
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 1.1e-36 157.9 111 67.6
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 7.4e-36 155.2 137 56.2
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 4.2e-31 139.4 146 56.8
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 7.2e-15 85.5 153 37.3
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 5.7e-12 75.9 52 67.3
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 6.3e-11 72.4 51 64.7
MELO3C009229.2 Cucumis melo HOM05D001947 ORTHO05D002440 6.1e-06 55.8 128 32.0
CsaV3_3G034580 Cucumis sativus L. HOM05D001947 ORTHO05D002440 6.1e-06 55.8 128 32.0


User provided reference genes

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