Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.1e-270 934.1 455 100.0
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 2.0e-269 931.8 455 99.8
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 6.9e-262 906.7 455 97.4
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.0e-261 905.2 455 96.7
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 9.1e-238 826.6 460 88.3
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 1.2e-173 613.6 450 70.2
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 1.1e-171 607.1 483 66.3
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 2.8e-170 602.4 484 65.3
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 6.2e-170 601.3 486 64.8
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 8.4e-167 590.9 487 64.7
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 3.0e-164 582.4 459 65.8
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 9.0e-161 570.9 437 64.8
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 6.5e-159 564.7 495 60.8
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 3.0e-156 555.8 470 63.6
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 2.5e-155 552.7 492 60.6
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 1.1e-153 547.4 468 62.0
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 1.8e-153 546.6 472 60.8
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 1.2e-152 543.9 468 61.5
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 1.5e-147 526.9 439 61.7
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 7.4e-147 524.6 490 57.8
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 6.5e-143 511.5 473 57.5
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 1.4e-142 510.4 481 55.5
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 4.2e-142 508.8 463 60.5
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 4.2e-142 508.8 489 57.1
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 9.4e-142 507.7 397 64.7
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.7e-141 506.1 484 56.4
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 2.7e-141 506.1 477 57.7
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.0e-140 504.2 464 58.4
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.0e-140 504.2 491 57.2
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.0e-140 504.2 491 57.2
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 3.3e-139 499.2 488 56.4
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 7.4e-139 498.0 464 56.2
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 2.8e-138 496.1 472 55.1
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 3.7e-138 495.7 494 55.3
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 4.8e-138 495.4 493 55.4
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 6.3e-138 495.0 460 56.3
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 2.4e-137 493.0 491 54.2
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 3.1e-137 492.7 465 56.1
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 9.1e-137 491.1 465 56.8
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.2e-136 490.7 472 56.4
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 4.5e-136 488.8 471 55.4
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 5.9e-136 488.4 488 53.9
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 1.7e-135 486.9 476 55.3
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 3.8e-135 485.7 483 55.7
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 1.5e-134 483.8 503 53.1
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 1.9e-134 483.4 484 54.8
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 4.2e-134 482.3 440 55.7
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 4.2e-134 482.3 497 52.3
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 1.6e-133 480.3 497 53.7
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 3.6e-133 479.2 484 52.5
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 2.3e-132 476.5 468 54.3
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 4.0e-132 475.7 486 53.7
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 6.7e-132 474.9 481 53.6
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 1.5e-131 473.8 496 53.8
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 1.3e-130 470.7 472 53.2
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 2.2e-130 469.9 490 52.9
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 2.2e-130 469.9 485 51.5
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 2.8e-130 469.5 439 53.8
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 4.8e-130 468.8 366 62.0
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 8.2e-130 468.0 458 55.0
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 1.4e-129 467.2 484 51.7
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 5.3e-129 465.3 486 50.8
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 5.3e-129 465.3 492 51.6
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 7.0e-129 464.9 476 53.2
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 2.0e-128 463.4 407 57.2
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 2.0e-128 463.4 458 53.5
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 1.7e-127 460.3 374 60.7
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 2.2e-127 459.9 383 60.1
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 2.9e-127 459.5 422 56.2
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 1.5e-126 457.2 418 56.0
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 2.1e-125 453.4 446 55.4
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 3.6e-125 452.6 442 55.2
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 4.7e-125 452.2 444 53.2
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 1.4e-124 450.7 361 62.3
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 5.2e-124 448.7 459 53.8
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 2.8e-122 443.0 367 59.7
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 3.1e-121 439.5 484 52.1
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 7.7e-120 434.9 455 50.5
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 3.8e-119 432.6 454 51.3
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 1.1e-118 431.0 411 55.7
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 1.5e-118 430.6 462 52.4
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 2.5e-118 429.9 460 50.0
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 4.2e-118 429.1 444 52.0
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 2.1e-117 426.8 436 53.4
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 6.1e-117 425.2 458 50.9
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 4.4e-115 419.1 443 51.9
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 1.7e-114 417.2 449 51.0
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 3.7e-114 416.0 465 50.3
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 3.7e-114 416.0 441 51.2
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 6.3e-114 415.2 460 48.9
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.8e-113 413.7 444 51.8
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 3.1e-113 412.9 462 50.9
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 5.4e-113 412.1 472 48.7
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 9.2e-113 411.4 449 51.2
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 9.2e-113 411.4 449 51.2
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 9.2e-113 411.4 449 51.2
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.3e-111 407.5 440 47.7
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 8.0e-109 398.3 406 53.0
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.2e-98 363.6 360 48.9
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 3.9e-87 326.2 456 44.5
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 1.6e-80 304.3 347 46.7
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 2.4e-76 290.4 339 46.3
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 7.1e-73 278.9 268 54.5
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 3.9e-71 273.1 206 61.2
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 5.1e-71 272.7 326 51.2
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 1.3e-66 258.1 392 39.0
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 5.6e-62 242.7 308 47.1
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 3.4e-59 233.4 470 35.1
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 2.8e-53 213.8 292 43.2
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 1.4e-52 211.5 387 34.9
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 7.9e-40 169.1 218 48.2
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.4e-36 157.5 360 32.8
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 4.2e-33 146.7 361 32.1
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 7.2e-33 146.0 357 31.4
Pp3c11_9510 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.8e-31 141.4 377 30.5
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 1.3e-29 135.2 112 60.7
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 8.2e-29 132.5 315 34.3
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 4.5e-27 126.7 156 47.4
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 3.8e-26 123.6 129 51.9
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 8.5e-26 122.5 251 36.3
AagrBONN_evm.TU.Sc2ySwM_362.1561 Anthoceros agrestis HOM05D006399 ORTHO05D007988 1.6e-19 101.7 300 30.7
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 4.7e-16 90.1 52 73.1
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 3.0e-07 60.8 46 60.9


User provided reference genes

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