Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 6.5e-307 1056.6 545 100.0
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 6.0e-260 900.6 456 98.0
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 3.4e-255 884.8 446 98.4
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 2.6e-247 858.6 446 94.8
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 4.0e-216 755.0 377 99.5
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 8.4e-214 747.3 448 82.1
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 5.5e-213 744.6 433 83.1
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 3.0e-211 738.8 451 80.3
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 1.6e-209 733.0 451 79.4
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 8.2e-209 730.7 445 80.9
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 3.1e-208 728.8 439 81.1
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 5.9e-207 724.5 448 79.5
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 5.9e-207 724.5 450 78.4
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 7.6e-207 724.2 447 79.2
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 1.0e-206 723.8 451 79.4
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 2.2e-206 722.6 435 80.2
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 8.5e-206 720.7 465 77.0
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 1.1e-205 720.3 440 80.7
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 1.4e-205 719.9 432 80.6
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 4.2e-205 718.4 439 79.3
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 7.2e-205 717.6 432 79.9
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 1.6e-204 716.5 449 78.8
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 2.7e-204 715.7 449 79.1
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 2.7e-204 715.7 451 78.3
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 3.6e-204 715.3 441 80.5
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 1.0e-203 713.8 444 77.5
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 1.0e-203 713.8 432 79.9
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 1.3e-203 713.4 432 79.9
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 1.3e-203 713.4 450 78.0
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 3.0e-203 712.2 450 78.0
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 3.9e-203 711.8 454 77.1
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 3.9e-203 711.8 435 79.8
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 6.7e-203 711.1 439 77.7
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 1.1e-202 710.3 448 77.9
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 7.4e-202 707.6 430 79.1
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 7.4e-202 707.6 430 77.7
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 9.7e-202 707.2 441 75.3
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 2.2e-201 706.1 479 73.3
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 6.3e-201 704.5 433 78.1
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 8.2e-201 704.1 434 77.6
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 1.4e-200 703.4 415 82.2
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 1.4e-200 703.4 430 77.9
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 1.8e-200 703.0 431 78.4
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 4.1e-200 701.8 448 75.2
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 4.1e-200 701.8 436 78.7
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 6.9e-200 701.0 435 77.0
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 2.0e-199 699.5 455 76.5
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 4.5e-199 698.4 448 77.2
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 7.7e-199 697.6 436 75.7
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 7.7e-199 697.6 450 75.6
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 1.3e-198 696.8 462 74.7
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 1.3e-198 696.8 430 77.2
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 1.7e-198 696.4 431 77.3
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 2.2e-198 696.0 431 77.5
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 2.9e-198 695.7 447 74.3
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 6.5e-198 694.5 437 76.7
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 1.9e-197 693.0 435 76.6
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 3.2e-197 692.2 445 73.5
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 1.6e-196 689.9 431 76.8
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 2.1e-196 689.5 448 73.2
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 4.7e-196 688.3 446 74.4
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 1.0e-195 687.2 449 74.2
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 1.0e-195 687.2 448 74.1
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 1.4e-195 686.8 448 73.9
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 1.4e-195 686.8 430 79.3
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 5.1e-195 684.9 446 74.7
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 2.6e-194 682.6 433 75.3
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 3.3e-194 682.2 450 73.1
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 4.4e-194 681.8 448 73.2
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 4.4e-194 681.8 449 72.6
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 1.3e-193 680.2 467 71.1
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 2.8e-193 679.1 449 76.2
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 3.7e-193 678.7 430 75.1
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 1.1e-192 677.2 451 73.4
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 1.1e-192 677.2 447 77.2
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 1.8e-192 676.4 487 68.6
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 2.4e-192 676.0 448 73.2
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 4.1e-192 675.2 448 73.0
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 5.3e-192 674.9 468 70.7
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 9.1e-192 674.1 432 75.5
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 2.0e-191 672.9 448 73.7
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 4.5e-191 671.8 432 75.7
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 5.9e-191 671.4 459 71.7
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 1.0e-190 670.6 477 69.4
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 2.9e-190 669.1 429 73.9
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 2.5e-189 666.0 448 72.8
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 1.3e-185 653.7 461 69.0
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 1.0e-182 644.0 453 71.7
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 2.2e-182 642.9 461 71.8
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 2.9e-182 642.5 404 75.7
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 9.4e-181 637.5 431 68.2
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 2.7e-180 636.0 484 67.4
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 3.6e-180 635.6 504 66.7
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 4.0e-179 632.1 434 70.3
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 4.8e-177 625.2 465 66.5
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 1.4e-176 623.6 412 73.3
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 3.1e-176 622.5 398 76.4
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 1.2e-172 610.5 409 74.1
Aa31LG2G15630 Aethionema arabicum HOM05D005577 ORTHO05D006941 2.3e-171 606.3 457 66.3
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 4.0e-171 605.5 386 74.4
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 2.5e-165 586.3 446 67.0
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 6.8e-163 578.2 463 64.8
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 5.7e-162 575.1 462 64.3
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 1.2e-156 557.4 422 63.3
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 3.6e-156 555.8 438 61.0
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 2.7e-151 539.7 464 56.2
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 3.9e-150 535.8 426 60.6
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 3.1e-147 526.2 427 58.1
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 4.0e-147 525.8 322 79.5
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 2.1e-132 476.9 278 80.9
BcaB05g24262 Brassica carinata HOM05D005577 ORTHO05D006941 3.6e-132 476.1 454 57.5
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 1.8e-115 420.6 431 47.1
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 3.2e-112 409.8 430 54.4
PRCOL_00003669 Prasinoderma coloniale HOM05D005577 ORTHO05D006941 7.6e-106 388.7 446 47.1
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 1.2e-103 381.3 315 63.8
QL03p057485 Quercus lobata HOM05D005577 ORTHO05D006941 2.0e-98 364.0 370 54.6
Aqoxy7G01339 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 5.0e-89 332.8 182 86.3
Cre06.g293000 Chlamydomonas reinhardtii HOM05D005577 ORTHO05D006941 1.3e-84 318.2 482 37.6
RcHm_v2.0_Chr4g0417261 Rosa chinensis HOM05D005577 ORTHO05D006941 3.0e-70 270.4 374 48.4
MD16G1122200 Malus domestica HOM05D005577 ORTHO05D006941 2.7e-63 247.3 339 44.0
Psat7g076800 Pisum sativum HOM05D005577 ORTHO05D006941 1.2e-58 231.9 167 70.1
Atru.chr11.2352 Acer truncatum HOM05D005577 ORTHO05D006941 6.1e-55 219.5 108 91.7
Atru.chr11.2354 Acer truncatum HOM05D005577 ORTHO05D006941 1.1e-43 182.2 117 76.9
RcHm_v2.0_Chr4g0417231 Rosa chinensis HOM05D005577 ORTHO05D006941 3.2e-43 180.6 137 70.8
Dinv17584 Davidia involucrata HOM05D005577 ORTHO05D006941 1.6e-39 168.3 390 33.6
Atru.chr11.2353 Acer truncatum HOM05D005577 ORTHO05D006941 2.3e-38 164.5 124 72.6
SHI17980 Sapria himalayana HOM05D005577 ORTHO05D006941 8.0e-31 139.4 89 67.4
SHI17983 Sapria himalayana HOM05D005577 ORTHO05D006941 5.2e-30 136.7 85 72.9
RcHm_v2.0_Chr4g0417241 Rosa chinensis HOM05D005577 ORTHO05D006941 1.1e-24 119.0 67 89.6
Potri.017G053801 Populus trichocarpa HOM05D005577 ORTHO05D006941 3.3e-24 117.5 83 68.7
Lsat_1_v5_gn_0_16180 Lactuca sativa HOM05D005577 ORTHO05D006941 7.3e-24 116.3 127 45.7
A10p10750 Brassica napus HOM05D005577 ORTHO05D006941 7.6e-21 106.3 70 67.1
MCO16G135 Micromonas commoda HOM05D005577 ORTHO05D267611 7.6e-21 106.3 191 31.9
QL10p065845 Quercus lobata HOM05D000176 ORTHO05D000106 2.9e-20 104.4 104 53.8
MD16G1122100 Malus domestica HOM05D005577 ORTHO05D006941 2.4e-19 101.3 72 63.9
Duzib268G0110 Durio zibethinus HOM05D005577 ORTHO05D006941 3.0e-17 94.4 101 52.5
SHI17981 Sapria himalayana HOM05D005577 ORTHO05D006941 9.6e-16 89.4 57 77.2
SHI17982 Sapria himalayana HOM05D005577 ORTHO05D006941 4.4e-13 80.5 70 58.6
arahy.Tifrunner.gnm1.ann1.V8UVVM Arachis hypogaea HOM05D005577 ORTHO05D086716 1.4e-06 58.9 43 60.5


User provided reference genes

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