Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G2016 Fragaria x ananassa HOM05D000071 ORTHO05D000029 2.0e-76 289.3 169 100.0
FAN10G0073 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.1e-23 114.0 111 64.0
FvH4_7g14060 Fragaria vesca HOM05D000071 ORTHO05D000029 7.3e-23 111.3 103 64.1
RcHm_v2.0_Chr1g0352901 Rosa chinensis HOM05D000071 ORTHO05D000029 1.6e-22 110.2 103 63.1
FAN03G0831 Fragaria x ananassa HOM05D000071 ORTHO05D000029 2.8e-22 109.4 103 63.1
RcHm_v2.0_Chr1g0354761 Rosa chinensis HOM05D000071 ORTHO05D000029 1.8e-21 106.7 103 60.2
RcHm_v2.0_Chr1g0354881 Rosa chinensis HOM05D000071 ORTHO05D000029 1.8e-21 106.7 103 63.1
FAN10G3224 Fragaria x ananassa HOM05D000071 ORTHO05D000029 2.3e-21 106.3 103 63.1
FAN10G0425 Fragaria x ananassa HOM05D000071 ORTHO05D000029 6.8e-21 104.8 106 61.3
FAN01G0052 Fragaria x ananassa HOM05D000071 ORTHO05D000029 8.9e-21 104.4 103 60.2
FAN10G3134 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.2e-20 104.0 106 60.4
FAN10G0659 Fragaria x ananassa HOM05D000071 ORTHO05D000029 5.8e-20 101.7 80 71.2
RcHm_v2.0_Chr1g0354971 Rosa chinensis HOM05D000071 ORTHO05D000029 6.4e-19 98.2 102 54.9
FvH4_7g14450 Fragaria vesca HOM05D000071 ORTHO05D000029 1.1e-18 97.4 105 55.2
FAN06G1677 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.1e-18 97.4 105 55.2
FAN10G1909 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.4e-18 97.1 108 54.6
FAN10G3717 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.4e-18 97.1 113 53.1
FAN01G1144 Fragaria x ananassa HOM05D000071 ORTHO05D000029 2.4e-18 96.3 108 53.7
FAN06G0057 Fragaria x ananassa HOM05D000071 ORTHO05D000029 3.2e-18 95.9 105 54.3
FvH4_7g14070 Fragaria vesca HOM05D000071 ORTHO05D000029 4.1e-18 95.5 103 58.3
FvH4_7g14110 Fragaria vesca HOM05D000071 ORTHO05D000029 9.2e-18 94.4 98 59.2
FAN03G3013 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.6e-17 93.6 108 52.8
RcHm_v2.0_Chr1g0354841 Rosa chinensis HOM05D000071 ORTHO05D000029 1.0e-16 90.9 95 55.8
RcHm_v2.0_Chr1g0355861 Rosa chinensis HOM05D000071 ORTHO05D000029 3.9e-16 89.0 105 50.5
RcHm_v2.0_Chr1g0354701 Rosa chinensis HOM05D000071 ORTHO05D000029 5.1e-16 88.6 60 76.7
Prupe.2G166100 Prunus persica HOM05D000071 ORTHO05D000029 9.5e-15 84.3 102 53.9
Prupe.2G155800 Prunus persica HOM05D000071 ORTHO05D000029 2.3e-13 79.7 103 53.4
FAN10G4041 Fragaria x ananassa HOM05D000071 ORTHO05D000029 4.0e-13 79.0 109 47.7
Prupe.2G156100 Prunus persica HOM05D000071 ORTHO05D000029 6.8e-13 78.2 58 67.2
FvH4_4g14031 Fragaria vesca HOM05D000071 ORTHO05D000029 8.9e-13 77.8 105 47.6
FAN03G3304 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.2e-12 77.4 107 47.7
Prupe.2G155900 Prunus persica HOM05D000071 ORTHO05D000029 1.2e-12 77.4 101 52.5
Prupe.2G155500 Prunus persica HOM05D000071 ORTHO05D000029 9.9e-12 74.3 102 48.0
MD00G1189100 Malus domestica HOM05D000071 ORTHO05D000029 1.7e-11 73.6 110 45.5
RcHm_v2.0_Chr1g0352891 Rosa chinensis HOM05D000071 ORTHO05D000029 1.9e-10 70.1 37 91.9
FAN06G4912 Fragaria x ananassa HOM05D000071 ORTHO05D000029 2.4e-10 69.7 61 60.7
RcHm_v2.0_Chr5g0069551 Rosa chinensis HOM05D000071 ORTHO05D000029 2.4e-10 69.7 111 43.2
MD01G1057400 Malus domestica HOM05D000071 ORTHO05D000029 5.4e-10 68.6 61 59.0
Thecc.07G083300 Theobroma cacao HOM05D000071 ORTHO05D000029 9.2e-10 67.8 131 37.4
FvH4_3g45420 Fragaria vesca HOM05D000071 ORTHO05D000029 1.2e-09 67.4 59 62.7
FAN11G1479 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.2e-09 67.4 59 62.7
RcHm_v2.0_Chr5g0069481 Rosa chinensis HOM05D000071 ORTHO05D000029 1.2e-09 67.4 61 59.0
COL.COLO4_30252 Corchorus olitorius HOM05D000071 ORTHO05D000029 1.6e-09 67.0 110 39.1
QL09p011963 Quercus lobata HOM05D000071 ORTHO05D000029 1.6e-09 67.0 104 42.3
QL09p010982 Quercus lobata HOM05D000071 ORTHO05D000029 2.1e-09 66.6 109 44.0
Prupe.2G168800 Prunus persica HOM05D000071 ORTHO05D000029 3.5e-09 65.9 60 56.7
MD01G1053800 Malus domestica HOM05D000071 ORTHO05D000029 6.0e-09 65.1 120 44.2
Prupe.2G169500 Prunus persica HOM05D000071 ORTHO05D000029 1.0e-08 64.3 58 58.6
Thecc.07G083100 Theobroma cacao HOM05D000071 ORTHO05D000029 1.0e-08 64.3 79 46.8
MD14G1186300 Malus domestica HOM05D000071 ORTHO05D000029 2.3e-08 63.2 104 41.3
MD01G1061800 Malus domestica HOM05D000071 ORTHO05D000029 3.0e-08 62.8 62 56.5
QL09p011863 Quercus lobata HOM05D000071 ORTHO05D000029 5.1e-08 62.0 108 39.8
QL09p011872 Quercus lobata HOM05D000071 ORTHO05D000029 5.1e-08 62.0 108 39.8
Prupe.2G169000 Prunus persica HOM05D000071 ORTHO05D000029 6.6e-08 61.6 58 58.6
RcHm_v2.0_Chr7g0205911 Rosa chinensis HOM05D000071 ORTHO05D000029 1.1e-07 60.8 112 36.6
Gohir.D05G357700 Gossypium hirsutum HOM05D000071 ORTHO05D000029 1.5e-07 60.5 114 36.0
MD01G1064400 Malus domestica HOM05D000071 ORTHO05D000029 1.5e-07 60.5 101 43.6
Prupe.2G167700 Prunus persica HOM05D000071 ORTHO05D000029 1.5e-07 60.5 58 55.2
QL02p063252 Quercus lobata HOM05D000071 ORTHO05D000029 1.9e-07 60.1 72 51.4
Thecc.07G083000 Theobroma cacao HOM05D000071 ORTHO05D000029 1.9e-07 60.1 79 43.0
Prupe.2G168400 Prunus persica HOM05D000071 ORTHO05D000029 2.5e-07 59.7 58 56.9
Thecc.07G083500 Theobroma cacao HOM05D000071 ORTHO05D000029 3.3e-07 59.3 79 44.3
EL10Ac3g05383 Beta vulgaris HOM05D000071 ORTHO05D000029 4.3e-07 58.9 88 37.5
Gohir.A04G029604 Gossypium hirsutum HOM05D000071 ORTHO05D000029 4.3e-07 58.9 114 36.0
MD01G1064600 Malus domestica HOM05D000071 ORTHO05D000029 7.3e-07 58.2 61 55.7
Prupe.2G166300 Prunus persica HOM05D000071 ORTHO05D000029 7.3e-07 58.2 112 43.8
Prupe.2G172300 Prunus persica HOM05D000071 ORTHO05D000029 7.3e-07 58.2 53 54.7
Gohir.D05G357328 Gossypium hirsutum HOM05D000071 ORTHO05D000029 9.5e-07 57.8 112 36.6
Gohir.D05G357744 Gossypium hirsutum HOM05D000071 ORTHO05D000029 9.5e-07 57.8 104 36.5
Prupe.2G167600 Prunus persica HOM05D000071 ORTHO05D000029 9.5e-07 57.8 62 56.5
Gohir.D05G357650 Gossypium hirsutum HOM05D000071 ORTHO05D000029 1.2e-06 57.4 114 37.7
MD01G1061600 Malus domestica HOM05D000071 ORTHO05D000029 1.2e-06 57.4 96 42.7
MD01G1062000 Malus domestica HOM05D000071 ORTHO05D000029 1.2e-06 57.4 60 55.0
MD01G1062500 Malus domestica HOM05D000071 ORTHO05D000029 1.2e-06 57.4 60 55.0
Ciclev10006453m.g Citrus clementina HOM05D000071 ORTHO05D000029 2.1e-06 56.6 107 35.5
Gorai.009G390200 Gossypium raimondii HOM05D000071 ORTHO05D000029 2.1e-06 56.6 112 39.3
MD01G1212500 Malus domestica HOM05D000071 ORTHO05D000029 2.1e-06 56.6 103 39.8
Thecc.03G189000 Theobroma cacao HOM05D000071 ORTHO05D000029 2.1e-06 56.6 78 42.3
Gohir.D05G357356 Gossypium hirsutum HOM05D000071 ORTHO05D000029 2.8e-06 56.2 114 35.1
Gohir.D05G357580 Gossypium hirsutum HOM05D000071 ORTHO05D000029 3.6e-06 55.8 114 37.7
Sabra12G0023700 Salix brachista HOM05D000071 ORTHO05D000029 3.6e-06 55.8 104 39.4
arahy.Tifrunner.gnm1.ann1.A57KBK Arachis hypogaea HOM05D000071 ORTHO05D000029 4.7e-06 55.5 83 43.4
Ciclev10006412m.g Citrus clementina HOM05D000071 ORTHO05D000029 4.7e-06 55.5 113 38.1
Medtr6g038670 Medicago truncatula HOM05D000071 ORTHO05D000029 4.7e-06 55.5 118 39.0
Prupe.2G169200 Prunus persica HOM05D000071 ORTHO05D000029 4.7e-06 55.5 92 41.3
QL02p063193 Quercus lobata HOM05D000071 ORTHO05D000029 4.7e-06 55.5 110 36.4
RcHm_v2.0_Chr1g0379671 Rosa chinensis HOM05D000071 ORTHO05D000029 4.7e-06 55.5 103 38.8
RcHm_v2.0_Chr1g0379681 Rosa chinensis HOM05D000071 ORTHO05D000029 4.7e-06 55.5 103 35.0
CANSAT56G0039 Cannabis sativa HOM05D000071 ORTHO05D000029 6.2e-06 55.1 64 48.4
CANSAT56G1444 Cannabis sativa HOM05D000071 ORTHO05D000029 6.2e-06 55.1 64 48.4
FAN08G3589 Fragaria x ananassa HOM05D000071 ORTHO05D000029 6.2e-06 55.1 103 37.9
Manes.02G176700 Manihot esculenta HOM05D000071 ORTHO05D000029 6.2e-06 55.1 120 36.7
RcHm_v2.0_Chr7g0206621 Rosa chinensis HOM05D000071 ORTHO05D000029 6.2e-06 55.1 112 35.7
FvH4_6g28530 Fragaria vesca HOM05D000071 ORTHO05D000029 8.1e-06 54.7 111 37.8
FAN04G2267 Fragaria x ananassa HOM05D000071 ORTHO05D000029 8.1e-06 54.7 103 37.9
FAN05G1261 Fragaria x ananassa HOM05D000071 ORTHO05D000029 8.1e-06 54.7 111 37.8
RcHm_v2.0_Chr7g0207481 Rosa chinensis HOM05D000071 ORTHO05D000029 8.1e-06 54.7 112 35.7


User provided reference genes

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