Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_4g17670 Fragaria vesca HOM05D006881 ORTHO05D008423 1.6e-62 243.0 125 100.0
FAN12G2006 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.6e-62 243.0 125 100.0
FAN12G2996 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.6e-62 243.0 125 100.0
FAN07G1171 Fragaria x ananassa HOM05D006881 ORTHO05D008423 6.1e-62 241.1 125 99.2
FAN17G1543 Fragaria x ananassa HOM05D006881 ORTHO05D008423 6.1e-62 241.1 125 99.2
RcHm_v2.0_Chr4g0421611 Rosa chinensis HOM05D006881 ORTHO05D008423 3.0e-53 212.2 114 94.7
MD13G1170800 Malus domestica HOM05D006881 ORTHO05D008423 1.2e-46 190.3 125 82.4
Prupe.1G139200 Prunus persica HOM05D006881 ORTHO05D008423 9.2e-42 174.1 126 76.2
Thecc.04G282000 Theobroma cacao HOM05D006881 ORTHO05D008423 4.0e-37 158.7 127 70.9
Gohir.A02G048200 Gossypium hirsutum HOM05D006881 ORTHO05D008423 4.4e-36 155.2 125 70.4
Gorai.005G059100 Gossypium raimondii HOM05D006881 ORTHO05D008423 9.8e-36 154.1 125 69.6
Gohir.D02G053300 Gossypium hirsutum HOM05D006881 ORTHO05D008423 1.3e-35 153.7 125 69.6
Duzib212G0198 Durio zibethinus HOM05D006881 ORTHO05D008423 3.7e-35 152.1 126 68.3
Dinv38306 Davidia involucrata HOM05D006881 ORTHO05D008423 2.4e-34 149.4 102 78.4
arahy.Tifrunner.gnm1.ann1.E8HU74 Arachis hypogaea HOM05D006881 ORTHO05D008423 2.7e-33 146.0 111 71.2
PSO170G5464 Papaver somniferum HOM05D006881 ORTHO05D008423 4.6e-33 145.2 112 71.4
CANSAT78G0809 Cannabis sativa HOM05D006881 ORTHO05D008423 6.0e-33 144.8 128 65.6
PSO210G1559 Papaver somniferum HOM05D006881 ORTHO05D008423 6.0e-33 144.8 106 74.5
Ciclev10005896m.g Citrus clementina HOM05D006881 ORTHO05D008423 1.0e-32 144.1 122 69.7
HanXRQChr17g0536111 Helianthus annuus HOM05D006881 ORTHO05D008423 1.3e-32 143.7 103 74.8
vmacro15245 Vaccinium macrocarpon HOM05D006881 ORTHO05D008423 2.3e-32 142.9 112 70.5
Phvul.009G245900 Phaseolus vulgaris HOM05D006881 ORTHO05D008423 3.0e-32 142.5 110 69.1
Atru.chr4.2800 Acer truncatum HOM05D006881 ORTHO05D008423 5.1e-32 141.7 111 72.1
Ca_02413_v3 Cicer arietinum L. HOM05D002802 ORTHO05D003166 6.6e-32 141.4 117 64.1
Glyma.09G046900 Glycine max HOM05D006881 ORTHO05D008423 6.6e-32 141.4 103 69.9
Lsat_1_v5_gn_3_24181 Lactuca sativa HOM05D006881 ORTHO05D008423 8.6e-32 141.0 113 70.8
Lalb_Chr18g0051811 Lupinus albus HOM05D006881 ORTHO05D008423 1.1e-31 140.6 118 62.7
CiPaw.01G150600 Carya illinoinensis HOM05D006881 ORTHO05D008423 2.5e-31 139.4 102 70.6
QL06p008283 Quercus lobata HOM05D006881 ORTHO05D008423 2.5e-31 139.4 104 74.0
Lj6g0021421 Lotus japonicus HOM05D006881 ORTHO05D008423 3.3e-31 139.0 109 66.1
Aqoxy2G03052 Aquilegia oxysepala HOM05D006881 ORTHO05D008423 7.3e-31 137.9 121 66.9
Psat1g151960 Pisum sativum HOM05D006881 ORTHO05D008423 7.3e-31 137.9 117 63.2
Glyma.15G154400 Glycine max HOM05D006881 ORTHO05D008423 1.2e-30 137.1 101 71.3
VMungo1309G2079 Vigna mungo HOM05D006881 ORTHO05D008423 1.2e-30 137.1 103 70.9
GSVIVG01017769001 Vitis vinifera HOM05D006881 ORTHO05D008423 1.2e-30 137.1 115 67.0
ECA246G4172 Erigeron canadensis HOM05D006881 ORTHO05D008423 1.6e-30 136.7 107 71.0
THA.LOC104818851 Tarenaya hassleriana HOM05D006881 ORTHO05D008423 2.8e-30 136.0 112 65.2
TPR.G23710 Trifolium pratense HOM05D006881 ORTHO05D008423 3.6e-30 135.6 105 66.7
CAN.G223.19 Capsicum annuum HOM05D006881 ORTHO05D008423 4.7e-30 135.2 120 61.7
Oeu021111.1 Olea europaea HOM05D006881 ORTHO05D008423 4.7e-30 135.2 117 65.8
PGR031G0133 Punica granatum HOM05D006881 ORTHO05D008423 4.7e-30 135.2 111 67.6
MBI19_g24002_MAGBIO Magnolia biondii HOM05D006881 ORTHO05D008423 6.2e-30 134.8 114 66.7
Peaxi162Scf00386g00414 Petunia axillaris HOM05D006881 ORTHO05D008423 6.2e-30 134.8 101 69.3
Sopen01g029530 Solanum pennellii HOM05D006881 ORTHO05D008423 6.2e-30 134.8 112 66.1
CARHR194480 Cardamine hirsuta HOM05D006881 ORTHO05D008423 8.1e-30 134.4 119 65.5
MSTRG.10082 Avicennia marina HOM05D006881 ORTHO05D008423 1.1e-29 134.0 118 62.7
Cc03_g02070 Coffea canephora HOM05D006881 ORTHO05D008423 1.1e-29 134.0 111 65.8
arahy.Tifrunner.gnm1.ann1.NXX1KJ Arachis hypogaea HOM05D006881 ORTHO05D008423 1.4e-29 133.7 130 60.0
BcaB05g23335 Brassica carinata HOM05D006881 ORTHO05D008423 2.3e-29 132.9 119 64.7
Solyc01g067580.4 Solanum lycopersicum HOM05D006881 ORTHO05D008423 2.3e-29 132.9 112 65.2
Actinidia00041 Actinidia chinensis HOM05D006881 ORTHO05D008423 3.1e-29 132.5 123 65.9
AT5G18540 Arabidopsis thaliana HOM05D006881 ORTHO05D008423 3.1e-29 132.5 119 65.5
A02p04970 Brassica napus HOM05D006881 ORTHO05D008423 3.1e-29 132.5 103 72.8
Carub.0006s1681 Capsella rubella HOM05D006881 ORTHO05D008423 3.1e-29 132.5 119 64.7
TWI09G1277 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 3.1e-29 132.5 99 70.7
Aa31LG11G11080 Aethionema arabicum HOM05D006881 ORTHO05D008423 6.8e-29 131.3 113 66.4
AL6G29810 Arabidopsis lyrata HOM05D006881 ORTHO05D008423 6.8e-29 131.3 119 64.7
BcaC03g13606 Brassica carinata HOM05D006881 ORTHO05D008423 6.8e-29 131.3 119 63.9
C02p10000 Brassica napus HOM05D006881 ORTHO05D008423 6.8e-29 131.3 119 63.9
BraA02t05456Z Brassica rapa HOM05D006881 ORTHO05D008423 1.2e-28 130.6 103 71.8
Migut.G00182 Erythranthe guttata HOM05D006881 ORTHO05D008423 1.2e-28 130.6 105 69.5
Sp6g25790 Schrenkiella parvula HOM05D006881 ORTHO05D008423 1.2e-28 130.6 119 63.9
Cpa.g.sc16.153 Carica papaya HOM05D006881 ORTHO05D008423 1.5e-28 130.2 102 67.6
CSS0005297 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 2.0e-28 129.8 117 64.1
CSS0009612 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 2.0e-28 129.8 117 64.1
Manes.03G192600 Manihot esculenta HOM05D006881 ORTHO05D008423 2.0e-28 129.8 106 67.0
TAR636G2672 Trochodendron aralioides HOM05D006881 ORTHO05D008423 2.0e-28 129.8 102 68.6
Os07g0669600 Oryza sativa ssp. japonica HOM05D006881 ORTHO05D008423 2.6e-28 129.4 108 68.5
PGSC0003DMG400010658 Solanum tuberosum HOM05D006881 ORTHO05D008423 2.6e-28 129.4 102 66.7
Sabra08G0154800 Salix brachista HOM05D006881 ORTHO05D008423 3.4e-28 129.0 105 68.6
Thhalv10014829m.g Eutrema salsugineum HOM05D006881 ORTHO05D008423 4.4e-28 128.6 114 64.9
DCAR_024558 Daucus carota HOM05D006881 ORTHO05D008423 3.8e-27 125.6 115 64.3
Eucgr.B01283 Eucalyptus grandis HOM05D006881 ORTHO05D008423 4.9e-27 125.2 101 66.3
SalBow2G0124 Salvia bowleyana HOM05D006881 ORTHO05D008423 8.4e-27 124.4 120 63.3
SalBow2G2956 Salvia bowleyana HOM05D006881 ORTHO05D008423 8.4e-27 124.4 120 63.3
unitig_748.g8741 Utricularia gibba HOM05D006881 ORTHO05D008423 8.4e-27 124.4 105 65.7
EL10Ac3g06585 Beta vulgaris HOM05D006881 ORTHO05D008423 1.1e-26 124.0 128 59.4
ClCG05G005980 Citrullus lanatus HOM05D006881 ORTHO05D008423 1.4e-26 123.6 103 66.0
BolC2t06902H Brassica oleracea HOM05D006881 ORTHO05D008423 1.9e-26 123.2 101 70.3
CDE09G1155 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 1.9e-26 123.2 107 64.5
Zm00001eb330210 Zea mays HOM05D006881 ORTHO05D008423 2.4e-26 122.9 117 59.0
Potri.008G216700 Populus trichocarpa HOM05D006881 ORTHO05D008423 3.2e-26 122.5 119 59.7
SGA_v2.0_scaffold86G26903 Striga asiatica HOM05D006881 ORTHO05D008423 4.1e-26 122.1 109 64.2
SEGI_11441 Sequoiadendron giganteum HOM05D006881 ORTHO05D008423 7.1e-26 121.3 118 56.8
Sc19g0005040 Simmondsia chinensis HOM05D006881 ORTHO05D008423 1.6e-25 120.2 127 56.7
Nitab4.5_0013689g0020 Nicotiana tabacum HOM05D006881 ORTHO05D008423 2.7e-25 119.4 83 74.7
HPP92_025226 Vanilla planifolia HOM05D006881 ORTHO05D008423 2.7e-25 119.4 109 61.5
Sed0007304 Sechium edule HOM05D006881 ORTHO05D008423 3.5e-25 119.0 123 60.2
HPP92_025214 Vanilla planifolia HOM05D006881 ORTHO05D008423 4.6e-25 118.6 108 62.0
Medtr2g437470 Medicago truncatula HOM05D006881 ORTHO05D008423 6.0e-25 118.2 109 61.5
Rhsim02G0011900 Rhododendron simsii HOM05D006881 ORTHO05D008423 1.7e-24 116.7 84 73.8
ATR0706G047 Amborella trichopoda HOM05D006881 ORTHO05D008423 2.3e-24 116.3 124 56.5
SMO367G0816 Selaginella moellendorffii HOM05D006881 ORTHO05D008423 5.1e-24 115.2 106 63.2
Hund20570 Selenicereus undatus HOM05D006881 ORTHO05D008423 1.5e-23 113.6 116 59.5
Nn3g21363 Nelumbo nucifera HOM05D006881 ORTHO05D008423 1.9e-23 113.2 80 72.5
CsaV3_3G014430 Cucumis sativus L. HOM05D006881 ORTHO05D008423 2.5e-23 112.8 121 57.9
Ah.13g074590 Amaranthus hybridus HOM05D006881 ORTHO05D008423 3.3e-23 112.5 141 51.1
Hma1.2p1_0698F.1_g205340 Hydrangea macrophylla HOM05D006881 ORTHO05D008423 5.6e-23 111.7 81 74.1
MELO3C006643.2 Cucumis melo HOM05D006881 ORTHO05D008423 7.3e-23 111.3 121 57.0
A10p21020 Brassica napus HOM05D006881 ORTHO05D008423 6.2e-22 108.2 124 54.0
Mapoly0010s0048 Marchantia polymorpha HOM05D006881 ORTHO05D008423 1.1e-21 107.5 113 55.8
CSS0034417 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 3.1e-21 105.9 84 69.0
BraA10t44166Z Brassica rapa HOM05D006881 ORTHO05D008423 2.0e-20 103.2 127 53.5
SHI00284 Sapria himalayana HOM05D006881 ORTHO05D008423 2.6e-20 102.8 87 63.2
Pp3c15_10020 Physcomitrium patens HOM05D006881 ORTHO05D008423 9.9e-20 100.9 117 49.6
TWI73G0635 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 2.9e-19 99.4 90 62.2
Haze_01236 Corylus avellana HOM05D006881 ORTHO05D008423 4.2e-18 95.5 81 63.0
CDE02G3907 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 3.5e-17 92.4 83 63.9
AagrBONN_evm.TU.Sc2ySwM_228.1971 Anthoceros agrestis HOM05D006881 ORTHO05D008423 1.1e-15 87.4 85 60.0
BcaC04g18670 Brassica carinata HOM05D006881 ORTHO05D008423 4.8e-14 82.0 59 78.0
CBR_g46646 Chara braunii HOM05D006881 ORTHO05D008423 4.8e-14 82.0 81 54.3
AUR62040384 Chenopodium quinoa HOM05D006881 ORTHO05D008423 1.2e-12 77.4 71 56.3
CSS0015929 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 5.8e-12 75.1 127 44.9
CSS0002463 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.4e-10 70.5 128 42.2
C09p57950 Brassica napus HOM05D006881 ORTHO05D008423 4.2e-10 68.9 39 82.1
BolC9t58662H Brassica oleracea HOM05D006881 ORTHO05D008423 4.2e-10 68.9 39 82.1
BcaB08g36664 Brassica carinata HOM05D006881 ORTHO05D008423 7.9e-09 64.7 118 42.4


User provided reference genes

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