Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G1940 Fragaria x ananassa HOM05D008144 ORTHO05D010081 0.0e+00 1887.5 995 100.0
FvH4_4g01740 Fragaria vesca HOM05D008144 ORTHO05D010081 0.0e+00 1776.1 980 96.0
FAN17G0986 Fragaria x ananassa HOM05D008144 ORTHO05D010081 0.0e+00 1736.5 983 94.2
FAN17G1249 Fragaria x ananassa HOM05D008144 ORTHO05D010081 0.0e+00 1736.5 983 94.2
FAN22G0807 Fragaria x ananassa HOM05D008144 ORTHO05D010081 0.0e+00 1668.3 998 89.5
RcHm_v2.0_Chr4g0388601 Rosa chinensis HOM05D008144 ORTHO05D010081 4.6e-234 815.5 676 70.3
Prupe.1G023500 Prunus persica HOM05D008144 ORTHO05D010081 2.2e-151 540.8 784 47.8
MD13G1201700 Malus domestica HOM05D008144 ORTHO05D010081 6.4e-119 433.0 791 42.1
Potri.008G159200 Populus trichocarpa HOM05D008144 ORTHO05D010081 4.1e-57 227.6 838 30.9
Potri.010G081000 Populus trichocarpa HOM05D008144 ORTHO05D010081 1.0e-52 213.0 830 29.6
Sabra08G0121300 Salix brachista HOM05D008144 ORTHO05D010081 8.9e-52 209.9 1037 28.6
QL06p000574 Quercus lobata HOM05D008144 ORTHO05D010081 2.2e-50 205.3 1053 27.4
Duzib151G0265 Durio zibethinus HOM05D008144 ORTHO05D010081 4.1e-49 201.1 1159 26.7
Dinv14059 Davidia involucrata HOM05D008144 ORTHO05D010081 4.5e-48 197.6 793 29.6
MD16G1202000 Malus domestica HOM05D008144 ORTHO05D010081 6.6e-47 193.7 283 49.1
CiPaw.01G194000 Carya illinoinensis HOM05D008144 ORTHO05D010081 6.8e-44 183.7 895 28.4
Thecc.04G241000 Theobroma cacao HOM05D008144 ORTHO05D010081 4.1e-41 174.5 1038 25.6
Haze_11249 Corylus avellana HOM05D008144 ORTHO05D010081 9.5e-38 163.3 754 28.6
CSS0041819 Camellia sinensis var. sinensis HOM05D008144 ORTHO05D010081 1.6e-37 162.5 776 27.7
GSVIVG01018069001 Vitis vinifera HOM05D008144 ORTHO05D010081 6.2e-37 160.6 778 28.0
Manes.03G171900 Manihot esculenta HOM05D008144 ORTHO05D010081 1.1e-36 159.8 1157 24.5
Ciclev10004664m.g Citrus clementina HOM05D008144 ORTHO05D010081 1.8e-36 159.1 569 31.3
CANSAT78G0891 Cannabis sativa HOM05D008144 ORTHO05D010081 7.5e-35 153.7 542 32.1
Duzib212G0503 Durio zibethinus HOM05D008144 ORTHO05D010081 1.7e-34 152.5 1096 26.4
COL.COLO4_13184 Corchorus olitorius HOM05D008144 ORTHO05D010081 1.6e-32 146.0 1113 25.3
Atru.chr4.2325 Acer truncatum HOM05D008144 ORTHO05D010081 4.6e-32 144.4 397 31.5
Gohir.D02G041500 Gossypium hirsutum HOM05D008144 ORTHO05D010081 8.1e-21 107.1 1050 23.2
Glyma.02G002200 Glycine max HOM05D008144 ORTHO05D010081 1.1e-20 106.7 1121 24.0
Gorai.005G045900 Gossypium raimondii HOM05D008144 ORTHO05D010081 1.1e-20 106.7 1026 22.9
Phvul.007G278800 Phaseolus vulgaris HOM05D008144 ORTHO05D010081 1.4e-20 106.3 268 34.7
TWI73G1171 Tripterygium wilfordii HOM05D008144 ORTHO05D010081 5.2e-20 104.4 846 25.3
Gohir.A02G034700 Gossypium hirsutum HOM05D008144 ORTHO05D010081 8.9e-20 103.6 1043 23.1
Eucgr.H03407 Eucalyptus grandis HOM05D008144 ORTHO05D010081 2.0e-19 102.4 291 30.6
Dinv44593 Davidia involucrata HOM05D008144 ORTHO05D010081 1.7e-18 99.4 196 39.3
TAR362G0851 Trochodendron aralioides HOM05D008144 ORTHO05D010081 2.4e-17 95.5 1011 24.0
Psat6g103240 Pisum sativum HOM05D008144 ORTHO05D010081 4.2e-17 94.7 219 36.1
Cpa.g.sc44.134 Carica papaya HOM05D008144 ORTHO05D010081 5.4e-17 94.4 327 31.8
Medtr1g041300 Medicago truncatula HOM05D008144 ORTHO05D010081 5.4e-17 94.4 608 26.3
MD16G1201900 Malus domestica HOM05D008144 ORTHO05D010081 4.6e-16 91.3 77 68.8
ClCG05G004780 Citrullus lanatus HOM05D025894 ORTHO05D010081 7.8e-16 90.5 528 27.5
Lalb_Chr03g0037551 Lupinus albus HOM05D008144 ORTHO05D010081 4.3e-14 84.7 1058 25.0
VMungo0720G0769 Vigna mungo HOM05D008144 ORTHO05D010081 7.3e-14 84.0 1005 23.2
Dinv14057 Davidia involucrata HOM05D008144 ORTHO05D010081 6.2e-13 80.9 174 40.2
Sed0006870 Sechium edule HOM05D025894 ORTHO05D010081 3.1e-12 78.6 562 25.4
PGSC0003DMG400006073 Solanum tuberosum HOM05D014400 ORTHO05D010081 3.1e-12 78.6 752 24.1
THA.LOC104809081 Tarenaya hassleriana HOM05D011210 ORTHO05D013204 6.9e-12 77.4 264 31.1
Nitab4.5_0000224g0080 Nicotiana tabacum HOM05D014400 ORTHO05D010081 5.8e-11 74.3 779 24.4
MELO3C006492.2 Cucumis melo HOM05D025894 ORTHO05D010081 7.6e-11 73.9 346 28.0
Dinv33607 Davidia involucrata HOM05D008144 ORTHO05D010081 2.2e-10 72.4 139 36.7
CsaV3_3G012810 Cucumis sativus L. HOM05D025894 ORTHO05D010081 8.4e-10 70.5 436 26.1
Solyc09g082900.3 Solanum lycopersicum HOM05D014400 ORTHO05D010081 4.2e-09 68.2 778 23.1
Sopen09g031740 Solanum pennellii HOM05D014400 ORTHO05D010081 5.4e-09 67.8 779 23.2
TPR.G32783 Trifolium pratense HOM05D008144 ORTHO05D010081 7.1e-09 67.4 1137 22.1
arahy.Tifrunner.gnm1.ann1.9W8MHJ Arachis hypogaea HOM05D048597 ORTHO05D038870 2.7e-08 65.5 108 38.0
arahy.Tifrunner.gnm1.ann1.PTW3I8 Arachis hypogaea HOM05D048597 ORTHO05D038870 6.0e-08 64.3 109 37.6
Migut.N00217 Erythranthe guttata HOM05D014400 ORTHO05D010081 7.8e-08 63.9 183 32.2
Actinidia04502 Actinidia chinensis HOM05D008144 ORTHO05D010081 3.0e-07 62.0 232 29.7
Sp7g12760 Schrenkiella parvula HOM05D011210 ORTHO05D013204 3.0e-07 62.0 169 34.9
DCAR_002363 Daucus carota HOM05D008144 ORTHO05D010081 2.5e-06 58.9 308 27.6
Actinidia40109 Actinidia chinensis HOM05D008144 ORTHO05D010081 9.6e-06 57.0 88 43.2


User provided reference genes

Program Settings