Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 8.0e-112 407.1 212 100.0
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.0e-110 402.5 212 99.1
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.5e-102 376.3 215 93.5
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 2.8e-88 328.9 173 99.4
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 2.5e-81 305.8 173 94.2
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.9e-77 292.4 155 97.4
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 6.0e-75 284.6 212 70.8
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 3.9e-74 282.0 173 86.7
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 8.7e-74 280.8 173 86.7
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 2.5e-73 279.3 177 83.1
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 3.3e-73 278.9 177 84.2
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 5.6e-73 278.1 173 85.5
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 1.6e-72 276.6 177 83.1
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 4.8e-72 275.0 177 82.5
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 1.7e-69 266.5 173 82.1
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 2.2e-69 266.2 173 79.8
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 2.9e-69 265.8 173 80.9
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 2.9e-69 265.8 173 80.9
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 1.4e-68 263.5 177 79.1
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.9e-68 263.1 177 78.5
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 2.5e-68 262.7 175 80.0
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 2.5e-68 262.7 166 80.1
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 3.2e-68 262.3 169 82.2
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 5.5e-68 261.5 174 77.6
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 5.5e-68 261.5 174 78.7
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 5.5e-68 261.5 174 81.6
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 7.1e-68 261.2 173 79.2
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 7.1e-68 261.2 173 76.9
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 7.1e-68 261.2 175 77.7
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 7.1e-68 261.2 173 79.8
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 9.3e-68 260.8 177 77.4
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 1.2e-67 260.4 159 83.6
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 1.2e-67 260.4 175 78.9
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 1.6e-67 260.0 175 79.4
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 2.1e-67 259.6 173 79.8
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 2.1e-67 259.6 178 77.5
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 2.1e-67 259.6 160 85.0
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 2.1e-67 259.6 174 77.6
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 2.7e-67 259.2 161 81.4
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 3.5e-67 258.8 177 77.4
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 3.5e-67 258.8 173 75.7
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 3.5e-67 258.8 177 76.8
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 3.5e-67 258.8 177 76.3
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 4.6e-67 258.5 174 78.2
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 4.6e-67 258.5 176 78.4
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 6.0e-67 258.1 177 75.7
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 7.9e-67 257.7 167 80.2
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.0e-66 257.3 173 77.5
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 1.0e-66 257.3 178 74.7
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 1.0e-66 257.3 173 78.0
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.3e-66 256.9 173 77.5
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 1.3e-66 256.9 173 77.5
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 1.3e-66 256.9 161 82.6
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 1.8e-66 256.5 173 75.7
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 1.8e-66 256.5 177 78.5
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 1.8e-66 256.5 179 76.0
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 1.8e-66 256.5 179 76.0
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 1.8e-66 256.5 179 76.0
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 1.8e-66 256.5 166 77.1
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 3.0e-66 255.8 177 79.1
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 3.9e-66 255.4 174 74.7
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 3.9e-66 255.4 173 73.4
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 3.9e-66 255.4 173 73.4
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.9e-66 255.4 173 76.9
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 3.9e-66 255.4 173 76.9
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 6.7e-66 254.6 174 74.7
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 6.7e-66 254.6 178 76.4
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 8.7e-66 254.2 174 77.0
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 1.1e-65 253.8 173 73.4
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 1.1e-65 253.8 173 73.4
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.1e-65 253.8 173 76.9
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 1.1e-65 253.8 156 82.1
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 1.1e-65 253.8 165 80.6
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 1.1e-65 253.8 178 75.8
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 1.1e-65 253.8 178 75.8
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 1.5e-65 253.4 177 74.6
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 2.5e-65 252.7 174 74.1
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 3.3e-65 252.3 174 74.1
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 4.3e-65 251.9 173 75.1
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 4.3e-65 251.9 177 76.3
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 4.3e-65 251.9 166 80.1
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 5.7e-65 251.5 173 72.8
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 7.4e-65 251.1 173 75.7
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 7.4e-65 251.1 177 72.3
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 9.6e-65 250.8 170 76.5
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 1.3e-64 250.4 178 74.7
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 2.1e-64 249.6 177 73.4
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 6.2e-64 248.1 149 83.9
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 1.4e-63 246.9 178 73.6
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 2.4e-63 246.1 148 84.5
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 4.1e-63 245.4 148 83.1
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 6.9e-63 244.6 173 72.3
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 7.6e-62 241.1 173 72.8
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 7.6e-62 241.1 148 81.8
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 1.0e-61 240.7 156 77.6
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 5.0e-61 238.4 149 83.9
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 8.4e-61 237.7 148 81.1
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 1.4e-60 236.9 153 81.0
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 2.5e-60 236.1 148 81.1
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 7.2e-60 234.6 166 75.9
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 9.3e-60 234.2 148 79.7
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 1.6e-59 233.4 174 72.4
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 7.9e-59 231.1 174 69.0
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 1.8e-58 229.9 174 69.5
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 2.3e-58 229.6 162 74.1
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 1.1e-57 227.3 174 67.8
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.5e-57 226.9 137 82.5
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 2.8e-56 222.6 147 78.9
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 1.2e-51 207.2 147 73.5
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 1.0e-50 204.1 126 81.0
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 2.3e-50 203.0 115 91.3
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 1.1e-49 200.7 120 87.5
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 5.7e-49 198.4 115 87.8
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 5.7e-49 198.4 157 66.2
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 8.2e-48 194.5 149 66.4
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 1.5e-46 190.3 108 89.8
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 1.0e-45 187.6 148 60.8
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 1.2e-43 180.6 116 79.3
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 2.1e-43 179.9 107 84.1
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 6.1e-43 178.3 147 59.9
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 7.9e-43 177.9 130 68.5
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 2.6e-41 172.9 107 81.3
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 4.4e-41 172.2 124 71.8
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 2.8e-32 142.9 90 78.9
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 4.7e-27 125.6 118 50.0
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 2.2e-16 90.1 106 53.8
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 1.2e-11 74.3 115 49.6


User provided reference genes

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