Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G1880 Fragaria x ananassa HOM05D006695 ORTHO05D008239 2.7e-58 228.4 110 100.0
FvH4_4g16710 Fragaria vesca HOM05D006695 ORTHO05D008239 1.2e-53 213.0 103 100.0
RcHm_v2.0_Chr4g0420161 Rosa chinensis HOM05D006695 ORTHO05D008239 1.2e-53 213.0 103 100.0
FAN07G1129 Fragaria x ananassa HOM05D006695 ORTHO05D008239 1.3e-52 209.5 103 98.1
FAN22G2065 Fragaria x ananassa HOM05D006695 ORTHO05D008239 1.3e-52 209.5 103 98.1
FAN17G3101 Fragaria x ananassa HOM05D006695 ORTHO05D008239 4.9e-52 207.6 103 97.1
Prupe.1G146500 Prunus persica HOM05D006695 ORTHO05D008239 1.2e-50 203.0 103 94.2
MD13G1177300 Malus domestica HOM05D006695 ORTHO05D008239 2.7e-50 201.8 103 93.2
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 3.3e-48 194.9 103 89.3
CiPaw.01G156500 Carya illinoinensis HOM05D006695 ORTHO05D008239 5.6e-48 194.1 103 89.3
Manes.03G188400 Manihot esculenta HOM05D006695 ORTHO05D008239 4.7e-47 191.0 103 87.4
Hma1.2p1_0643F.1_g194500 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 6.1e-47 190.7 100 91.0
Phvul.003G098300 Phaseolus vulgaris HOM05D006695 ORTHO05D008239 6.1e-47 190.7 100 89.0
TPR.G28124 Trifolium pratense HOM05D006695 ORTHO05D008239 6.1e-47 190.7 103 86.4
QL06p006240 Quercus lobata HOM05D006695 ORTHO05D008239 1.0e-46 189.9 103 89.3
CANSAT78G2164 Cannabis sativa HOM05D006695 ORTHO05D008239 1.4e-46 189.5 103 89.3
Psat4g028960 Pisum sativum HOM05D006695 ORTHO05D008239 1.4e-46 189.5 103 86.4
SalBow5G4654 Salvia bowleyana HOM05D006695 ORTHO05D008239 4.0e-46 188.0 100 90.0
SalBow5G4989 Salvia bowleyana HOM05D006695 ORTHO05D008239 4.0e-46 188.0 100 90.0
VMungo1215G2645 Vigna mungo HOM05D006695 ORTHO05D008239 4.0e-46 188.0 103 86.4
Actinidia23450 Actinidia chinensis HOM05D006695 ORTHO05D008239 5.2e-46 187.6 100 89.0
Atru.chr4.2706 Acer truncatum HOM05D006695 ORTHO05D008239 6.8e-46 187.2 102 86.3
Cpa.g.sc16.75 Carica papaya HOM05D006695 ORTHO05D008239 6.8e-46 187.2 103 88.3
MELO3C006586.2 Cucumis melo HOM05D006695 ORTHO05D008239 6.8e-46 187.2 103 85.4
Medtr4g118420 Medicago truncatula HOM05D006695 ORTHO05D008239 6.8e-46 187.2 103 84.5
Nitab4.5_0000059g0220 Nicotiana tabacum HOM05D006695 ORTHO05D008239 6.8e-46 187.2 102 86.3
Sed0007686 Sechium edule HOM05D006695 ORTHO05D008239 6.8e-46 187.2 103 87.4
GSVIVG01017849001 Vitis vinifera HOM05D006695 ORTHO05D008239 6.8e-46 187.2 103 86.4
CSS0029139 Camellia sinensis var. sinensis HOM05D002837 ORTHO05D008239 8.9e-46 186.8 100 89.0
Cfa015538 Carpinus fangiana HOM05D006695 ORTHO05D008239 8.9e-46 186.8 103 87.4
Haze_01012 Corylus avellana HOM05D006695 ORTHO05D008239 8.9e-46 186.8 103 87.4
CsaV3_3G013940 Cucumis sativus L. HOM05D006695 ORTHO05D008239 1.2e-45 186.4 103 85.4
TWI09G1388 Tripterygium wilfordii HOM05D006695 ORTHO05D008239 1.2e-45 186.4 103 85.4
DCAR_022857 Daucus carota HOM05D006695 ORTHO05D008239 2.0e-45 185.7 101 87.1
Potri.008G198200 Populus trichocarpa HOM05D006695 ORTHO05D008239 2.0e-45 185.7 103 85.4
PGR004G1570 Punica granatum HOM05D006695 ORTHO05D008239 2.0e-45 185.7 103 86.4
Ciclev10006973m.g Citrus clementina HOM05D006695 ORTHO05D008239 2.6e-45 185.3 102 86.3
MSTRG.24766 Avicennia marina HOM05D006695 ORTHO05D008239 3.4e-45 184.9 100 88.0
CAN.G889.4 Capsicum annuum HOM05D006695 ORTHO05D008239 3.4e-45 184.9 101 86.1
Lj3A806T51 Lonicera japonica HOM05D006695 ORTHO05D008239 3.4e-45 184.9 100 88.0
SGA_v2.0_scaffold89G27581 Striga asiatica HOM05D006695 ORTHO05D008239 3.4e-45 184.9 102 86.3
Glyma.17G020700 Glycine max HOM05D006695 ORTHO05D008239 4.4e-45 184.5 100 87.0
Oeu044811.1 Olea europaea HOM05D006695 ORTHO05D008239 4.4e-45 184.5 100 89.0
Peaxi162Scf00095g00413 Petunia axillaris HOM05D006695 ORTHO05D008239 7.5e-45 183.7 101 84.2
Sabra08G0162200 Salix brachista HOM05D006695 ORTHO05D008239 7.5e-45 183.7 103 84.5
Solyc01g080470.3 Solanum lycopersicum HOM05D006695 ORTHO05D008239 7.5e-45 183.7 101 85.1
Sopen01g032270 Solanum pennellii HOM05D006695 ORTHO05D008239 7.5e-45 183.7 101 85.1
PGSC0003DMG400032106 Solanum tuberosum HOM05D006695 ORTHO05D008239 7.5e-45 183.7 101 85.1
Gohir.A10G105600 Gossypium hirsutum HOM05D006695 ORTHO05D008239 9.8e-45 183.3 103 83.5
Gohir.D10G163000 Gossypium hirsutum HOM05D006695 ORTHO05D008239 9.8e-45 183.3 103 83.5
Gorai.011G181900 Gossypium raimondii HOM05D006695 ORTHO05D008239 9.8e-45 183.3 103 83.5
TAR362G0795 Trochodendron aralioides HOM05D006695 ORTHO05D008239 9.8e-45 183.3 103 85.4
Lsat_1_v5_gn_6_64520 Lactuca sativa HOM05D006695 ORTHO05D008239 1.3e-44 183.0 100 86.0
Lj4g0002890 Lotus japonicus HOM05D006695 ORTHO05D008239 1.3e-44 183.0 101 85.1
Migut.N00136 Erythranthe guttata HOM05D006695 ORTHO05D008239 2.9e-44 181.8 100 85.0
Duzib151G0948 Durio zibethinus HOM05D006695 ORTHO05D008239 4.9e-44 181.0 103 85.4
ECA233G4227 Erigeron canadensis HOM05D006695 ORTHO05D008239 6.4e-44 180.6 100 86.0
Thecc.04G272900 Theobroma cacao HOM05D006695 ORTHO05D008239 6.4e-44 180.6 103 81.6
Lalb_Chr12g0196371 Lupinus albus HOM05D006695 ORTHO05D008239 1.4e-43 179.5 104 83.7
THA.LOC104821758 Tarenaya hassleriana HOM05D006695 ORTHO05D008239 1.8e-43 179.1 100 84.0
Sc25g0004560 Simmondsia chinensis HOM05D006695 ORTHO05D008239 2.4e-43 178.7 104 83.7
EL10Ac3g06533 Beta vulgaris HOM05D006695 ORTHO05D008239 3.2e-43 178.3 102 81.4
AUR62040724 Chenopodium quinoa HOM05D006695 ORTHO05D008239 5.4e-43 177.6 101 82.2
Cc03_g02720 Coffea canephora HOM05D006695 ORTHO05D008239 5.4e-43 177.6 100 83.0
Eucgr.H03643 Eucalyptus grandis HOM05D006695 ORTHO05D008239 5.4e-43 177.6 103 80.6
Aa31LG9G1920 Aethionema arabicum HOM05D006695 ORTHO05D008239 9.2e-43 176.8 100 83.0
unitig_8.g3083 Utricularia gibba HOM05D006695 ORTHO05D008239 9.2e-43 176.8 100 83.0
Aqoxy5G00568 Aquilegia oxysepala HOM05D006695 ORTHO05D008239 1.2e-42 176.4 102 81.4
A03p49160 Brassica napus HOM05D006695 ORTHO05D008239 2.0e-42 175.6 101 85.1
BraA03t14010Z Brassica rapa HOM05D006695 ORTHO05D008239 4.6e-42 174.5 101 84.2
Carub.0007s2636 Capsella rubella HOM05D006695 ORTHO05D008239 7.8e-42 173.7 101 81.2
PSO832G0924 Papaver somniferum HOM05D006695 ORTHO05D008239 7.8e-42 173.7 102 79.4
CDE02G2295 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 1.0e-41 173.3 104 78.8
CDE08G0351 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 1.3e-41 172.9 104 78.8
BcaC06g32939 Brassica carinata HOM05D006695 ORTHO05D008239 1.7e-41 172.6 101 82.2
PSO210G1829 Papaver somniferum HOM05D006695 ORTHO05D008239 2.3e-41 172.2 102 78.4
CARHR222310 Cardamine hirsuta HOM05D006695 ORTHO05D008239 3.0e-41 171.8 101 82.2
AT4G15520 Arabidopsis thaliana HOM05D006695 ORTHO05D008239 3.9e-41 171.4 101 81.2
Thhalv10026193m.g Eutrema salsugineum HOM05D006695 ORTHO05D008239 3.9e-41 171.4 101 80.2
SEGI_18217 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 3.9e-41 171.4 101 77.2
AL7G40000 Arabidopsis lyrata HOM05D006695 ORTHO05D008239 5.0e-41 171.0 101 81.2
Sp7g13770 Schrenkiella parvula HOM05D006695 ORTHO05D008239 5.0e-41 171.0 101 80.2
BcaNung00267 Brassica carinata HOM05D006695 ORTHO05D008239 8.6e-41 170.2 101 81.2
A01p22050 Brassica napus HOM05D006695 ORTHO05D008239 1.1e-40 169.9 101 81.2
BraA01t02111Z Brassica rapa HOM05D006695 ORTHO05D008239 1.1e-40 169.9 101 81.2
BolC1t02683H Brassica oleracea HOM05D006695 ORTHO05D008239 2.5e-40 168.7 101 80.2
ATR0580G301 Amborella trichopoda HOM05D006695 ORTHO05D008239 3.3e-40 168.3 101 75.2
BcaC09g50242 Brassica carinata HOM05D006695 ORTHO05D008239 5.6e-40 167.5 101 80.2
BcaC09g50247 Brassica carinata HOM05D006695 ORTHO05D008239 5.6e-40 167.5 101 80.2
HanXRQChr08g0235981 Helianthus annuus HOM05D006695 ORTHO05D008239 7.3e-40 167.2 101 79.2
C01p27440 Brassica napus HOM05D006695 ORTHO05D008239 9.5e-40 166.8 101 80.2
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 8.0e-39 163.7 102 73.5
SHI00328 Sapria himalayana HOM05D006695 ORTHO05D008239 1.1e-38 163.3 103 74.8
SMO347G0043 Selaginella moellendorffii HOM05D006695 ORTHO05D008239 1.1e-38 163.3 101 74.3
ClCG05G005600 Citrullus lanatus HOM05D006695 ORTHO05D008239 1.4e-38 162.9 88 86.4
Mapoly0001s0064 Marchantia polymorpha HOM05D006695 ORTHO05D008239 3.4e-37 158.3 100 71.0
Os05g0141400 Oryza sativa ssp. japonica HOM05D006695 ORTHO05D008239 3.4e-37 158.3 102 75.5
Nitab4.5_0006860g0010 Nicotiana tabacum HOM05D006695 ORTHO05D008239 4.4e-37 157.9 83 89.2
Zm00001eb108650 Zea mays HOM05D006695 ORTHO05D008239 4.4e-37 157.9 102 75.5
Sed0005422 Sechium edule HOM05D006695 ORTHO05D008239 3.7e-36 154.8 89 80.9
AagrBONN_evm.TU.Sc2ySwM_228.600 Anthoceros agrestis HOM05D006695 ORTHO05D008239 1.4e-35 152.9 98 68.4
Pp3c22_4480 Physcomitrium patens HOM05D006695 ORTHO05D008239 4.6e-34 147.9 100 68.0
BcaC06g33413 Brassica carinata HOM05D006695 ORTHO05D008239 3.0e-33 145.2 101 73.3
FAN12G3773 Fragaria x ananassa HOM05D006695 ORTHO05D008239 3.3e-32 141.7 90 81.1
Cre05.g238950 Chlamydomonas reinhardtii HOM05D006695 ORTHO05D008239 9.9e-29 130.2 100 60.0
C07p47200 Brassica napus HOM05D006695 ORTHO05D008239 2.2e-28 129.0 77 79.2
BolC7t45242H Brassica oleracea HOM05D006695 ORTHO05D008239 7.8e-26 120.6 72 79.2
CBR_g29507 Chara braunii HOM05D006695 ORTHO05D008239 1.9e-24 115.9 91 61.5
MCO16G273 Micromonas commoda HOM05D006695 ORTHO05D008239 1.6e-23 112.8 100 54.0
ATR0235G001 Amborella trichopoda HOM05D006695 ORTHO05D008239 1.4e-22 109.8 68 73.5
PRCOL_00001113 Prasinoderma coloniale HOM05D006695 ORTHO05D008239 2.6e-13 79.0 117 41.9
Glyma.06G247300 Glycine max HOM05D006695 ORTHO05D008239 2.9e-12 75.5 43 72.1
MD16G1178900 Malus domestica HOM05D006695 ORTHO05D008239 2.4e-11 72.4 33 93.9
vmacro08234 Vaccinium macrocarpon HOM05D006695 ORTHO05D008239 2.7e-10 68.9 34 88.2
Hma1.2p1_0643F.1_g194510 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 1.3e-09 66.6 35 80.0
Dinv38348 Davidia involucrata HOM05D006695 ORTHO05D008239 5.1e-09 64.7 35 77.1


User provided reference genes

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