Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G1341 Fragaria x ananassa HOM05D006087 ORTHO05D007479 5.3e-53 210.7 101 100.0
FAN12G1854 Fragaria x ananassa HOM05D006087 ORTHO05D007479 5.3e-53 210.7 101 100.0
FAN07G1634 Fragaria x ananassa HOM05D006087 ORTHO05D007479 5.8e-52 207.2 101 98.0
FAN22G0702 Fragaria x ananassa HOM05D006087 ORTHO05D007479 5.8e-52 207.2 101 98.0
FAN17G2012 Fragaria x ananassa HOM05D006087 ORTHO05D007479 3.8e-51 204.5 98 99.0
RcHm_v2.0_Chr4g0430231 Rosa chinensis HOM05D006087 ORTHO05D007479 1.4e-50 202.6 99 97.0
MD16G1119600 Malus domestica HOM05D006087 ORTHO05D007479 7.9e-41 170.2 97 82.5
Eucgr.B03495 Eucalyptus grandis HOM05D006087 ORTHO05D007479 1.3e-40 169.5 96 83.3
MD13G1119200 Malus domestica HOM05D006087 ORTHO05D007479 5.1e-40 167.5 97 81.4
MELO3C011864.2 Cucumis melo HOM05D006087 ORTHO05D007479 4.3e-39 164.5 97 79.4
TWI75G0102 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 1.3e-38 162.9 97 80.4
Ciclev10033174m.g Citrus clementina HOM05D006087 ORTHO05D007479 1.1e-37 159.8 95 78.9
CsaV3_5G030260 Cucumis sativus L. HOM05D006087 ORTHO05D007479 1.1e-37 159.8 97 77.3
Gohir.D12G152800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 4.1e-37 157.9 93 80.6
Gorai.008G165300 Gossypium raimondii HOM05D006087 ORTHO05D007479 4.1e-37 157.9 93 80.6
TWI18G0911 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 5.3e-37 157.5 97 77.3
TAR374G1631 Trochodendron aralioides HOM05D006087 ORTHO05D007479 1.5e-36 156.0 94 78.7
Prupe.1G225600 Prunus persica HOM05D006087 ORTHO05D007479 2.6e-36 155.2 97 77.3
TWI36G1569 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 2.6e-36 155.2 97 77.3
Lalb_Chr12g0206161 Lupinus albus HOM05D006087 ORTHO05D007479 4.5e-36 154.5 95 72.6
QL03p052667 Quercus lobata HOM05D006087 ORTHO05D007479 4.5e-36 154.5 95 78.9
Atru.chr11.2326 Acer truncatum HOM05D006087 ORTHO05D007479 5.9e-36 154.1 94 76.6
PSO017G6027 Papaver somniferum HOM05D006087 ORTHO05D007479 5.9e-36 154.1 93 75.3
PSO478G2574 Papaver somniferum HOM05D006087 ORTHO05D007479 5.9e-36 154.1 93 75.3
Lj4g0011842 Lotus japonicus HOM05D006087 ORTHO05D007479 1.7e-35 152.5 97 74.2
THA.LOC104812595 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 2.2e-35 152.1 93 74.2
Duzib251G0251 Durio zibethinus HOM05D006087 ORTHO05D007479 3.8e-35 151.4 94 75.5
Sp2g08050 Schrenkiella parvula HOM05D006087 ORTHO05D007479 3.8e-35 151.4 96 72.9
CiPaw.05G109600 Carya illinoinensis HOM05D006087 ORTHO05D007479 5.0e-35 151.0 95 75.8
AL8G17230 Arabidopsis lyrata HOM05D006087 ORTHO05D007479 6.5e-35 150.6 94 72.3
Duzib248G0070 Durio zibethinus HOM05D006087 ORTHO05D007479 8.4e-35 150.2 93 75.3
Ah.03g136140 Amaranthus hybridus HOM05D006087 ORTHO05D007479 1.1e-34 149.8 94 74.5
CANSAT01G2640 Cannabis sativa HOM05D006087 ORTHO05D007479 1.1e-34 149.8 97 75.3
Gohir.A12G148826 Gossypium hirsutum HOM05D006087 ORTHO05D007479 1.4e-34 149.4 93 77.4
COL.COLO4_20404 Corchorus olitorius HOM05D006087 ORTHO05D007479 1.9e-34 149.1 93 75.3
Manes.12G011100 Manihot esculenta HOM05D006087 ORTHO05D007479 1.9e-34 149.1 95 73.7
Thecc.02G208200 Theobroma cacao HOM05D006087 ORTHO05D007479 2.5e-34 148.7 94 75.5
A06p47950 Brassica napus HOM05D006087 ORTHO05D007479 5.5e-34 147.5 96 70.8
C07p25860 Brassica napus HOM05D006087 ORTHO05D007479 5.5e-34 147.5 96 70.8
BolC7t43103H Brassica oleracea HOM05D006087 ORTHO05D007479 5.5e-34 147.5 96 70.8
BraA06t27665Z Brassica rapa HOM05D006087 ORTHO05D007479 5.5e-34 147.5 96 70.8
Cc11_g16920 Coffea canephora HOM05D006087 ORTHO05D007479 5.5e-34 147.5 100 72.0
Actinidia20712 Actinidia chinensis HOM05D006087 ORTHO05D007479 7.2e-34 147.1 95 73.7
Solyc05g015470.1 Solanum lycopersicum HOM05D006087 ORTHO05D007479 7.2e-34 147.1 98 75.5
Sopen05g010780 Solanum pennellii HOM05D006087 ORTHO05D007479 7.2e-34 147.1 98 75.5
AT5G43260 Arabidopsis thaliana HOM05D006087 ORTHO05D007479 9.3e-34 146.7 94 71.3
Gohir.D04G182800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 1.2e-33 146.4 93 71.0
Gorai.012G175800 Gossypium raimondii HOM05D006087 ORTHO05D007479 1.2e-33 146.4 93 71.0
Sc04g0010140 Simmondsia chinensis HOM05D006087 ORTHO05D007479 1.2e-33 146.4 95 72.6
BcaC04g21941 Brassica carinata HOM05D006087 ORTHO05D007479 1.6e-33 146.0 96 69.8
C09p25630 Brassica napus HOM05D006087 ORTHO05D007479 1.6e-33 146.0 96 69.8
BolC9t55466H Brassica oleracea HOM05D006087 ORTHO05D007479 1.6e-33 146.0 96 69.8
Glyma.18G006400 Glycine max HOM05D006087 ORTHO05D007479 1.6e-33 146.0 95 71.6
TAR622G0081 Trochodendron aralioides HOM05D006087 ORTHO05D007479 1.6e-33 146.0 96 72.9
BraA09t37633Z Brassica rapa HOM05D006087 ORTHO05D007479 2.1e-33 145.6 96 69.8
Phvul.001G262000 Phaseolus vulgaris HOM05D006087 ORTHO05D007479 2.1e-33 145.6 95 71.6
PGSC0003DMG400014051 Solanum tuberosum HOM05D006087 ORTHO05D007479 2.7e-33 145.2 98 72.4
A09p20220 Brassica napus HOM05D006087 ORTHO05D007479 3.5e-33 144.8 96 69.8
Glyma.11G250700 Glycine max HOM05D006087 ORTHO05D007479 3.5e-33 144.8 95 70.5
Cfa009371 Carpinus fangiana HOM05D006087 ORTHO05D007479 6.1e-33 144.1 95 73.7
Haze_12421 Corylus avellana HOM05D006087 ORTHO05D007479 6.1e-33 144.1 95 73.7
CiPaw.06G102800 Carya illinoinensis HOM05D006087 ORTHO05D007479 7.9e-33 143.7 95 72.6
EL10Ac6g13503 Beta vulgaris HOM05D006087 ORTHO05D007479 1.0e-32 143.3 90 72.2
Potri.001G056601 Populus trichocarpa HOM05D006087 ORTHO05D007479 1.3e-32 142.9 94 74.5
BcaB07g31021 Brassica carinata HOM05D006087 ORTHO05D007479 1.8e-32 142.5 95 68.4
CDE02G3899 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 1.8e-32 142.5 98 69.4
unitig_749.g13305 Utricularia gibba HOM05D006087 ORTHO05D007479 1.8e-32 142.5 96 74.0
Carub.0008s0544 Capsella rubella HOM05D006087 ORTHO05D007479 2.3e-32 142.1 95 70.5
Gohir.A04G139600 Gossypium hirsutum HOM05D006087 ORTHO05D007479 2.3e-32 142.1 93 69.9
SGA_v2.0_scaffold9G04680 Striga asiatica HOM05D006087 ORTHO05D007479 6.7e-32 140.6 99 67.7
Oeu036868.1 Olea europaea HOM05D006087 ORTHO05D007479 8.7e-32 140.2 95 71.6
TPR.G17782 Trifolium pratense HOM05D006087 ORTHO05D007479 8.7e-32 140.2 95 68.4
CARHR180610 Cardamine hirsuta HOM05D006087 ORTHO05D007479 1.5e-31 139.4 94 68.1
Ah.02g130900 Amaranthus hybridus HOM05D006087 ORTHO05D007479 2.5e-31 138.7 98 68.4
CAN.G163.9 Capsicum annuum HOM05D006087 ORTHO05D007479 3.3e-31 138.3 97 70.1
Psat5g096360 Pisum sativum HOM05D006087 ORTHO05D007479 4.3e-31 137.9 95 69.5
Aa31LG9G13330 Aethionema arabicum HOM05D006087 ORTHO05D007479 7.4e-31 137.1 95 70.5
Ca_16458_v3 Cicer arietinum L. HOM05D006087 ORTHO05D007479 9.7e-31 136.7 95 67.4
Nitab4.5_0001808g0020 Nicotiana tabacum HOM05D006087 ORTHO05D007479 9.7e-31 136.7 94 73.4
Hma1.2p1_0065F.1_g035460 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 2.2e-30 135.6 96 69.8
Lsat_1_v5_gn_4_3481 Lactuca sativa HOM05D006087 ORTHO05D007479 2.8e-30 135.2 101 68.3
Duzib268G0474 Durio zibethinus HOM05D006087 ORTHO05D007479 4.8e-30 134.4 91 70.3
Nitab4.5_0000039g0180 Nicotiana tabacum HOM05D006087 ORTHO05D007479 4.8e-30 134.4 94 71.3
ATR0561G204 Amborella trichopoda HOM05D006087 ORTHO05D007479 6.3e-30 134.0 95 68.4
Medtr3g085300 Medicago truncatula HOM05D006087 ORTHO05D007479 8.2e-30 133.7 96 66.7
Potri.003G171800 Populus trichocarpa HOM05D006087 ORTHO05D007479 8.2e-30 133.7 96 68.8
HanXRQChr10g0310621 Helianthus annuus HOM05D006087 ORTHO05D007479 1.1e-29 133.3 93 68.8
Oeu004448.1 Olea europaea HOM05D006087 ORTHO05D007479 1.1e-29 133.3 95 68.4
AUR62005621 Chenopodium quinoa HOM05D006087 ORTHO05D007479 4.1e-29 131.3 95 66.3
Cpa.g.sc43.59 Carica papaya HOM05D006087 ORTHO05D007479 9.0e-29 130.2 93 69.9
Mapoly0062s0032 Marchantia polymorpha HOM05D006087 ORTHO05D007479 1.2e-28 129.8 103 62.1
Migut.K00735 Erythranthe guttata HOM05D006087 ORTHO05D007479 3.4e-28 128.3 97 67.0
AUR62028927 Chenopodium quinoa HOM05D006087 ORTHO05D007479 5.9e-28 127.5 95 64.2
MD05G1114700 Malus domestica HOM05D006087 ORTHO05D007479 1.3e-27 126.3 81 74.1
ECA234G0111 Erigeron canadensis HOM05D006087 ORTHO05D007479 1.7e-27 125.9 87 70.1
Rhsim12G0025700 Rhododendron simsii HOM05D006087 ORTHO05D007479 1.7e-27 125.9 98 65.3
PGR102G3303 Punica granatum HOM05D006087 ORTHO05D007479 2.2e-27 125.6 95 66.3
THA.LOC104820522 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 2.9e-27 125.2 93 64.5
THA.LOC104825505 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 2.9e-27 125.2 98 64.3
MELO3C010741.2 Cucumis melo HOM05D006087 ORTHO05D007479 8.5e-27 123.6 92 63.0
THA.LOC104807129 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 2.5e-26 122.1 98 63.3
Aqoxy5G03370 Aquilegia oxysepala HOM05D006087 ORTHO05D007479 5.5e-26 120.9 93 65.6
CSS0016505 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 1.2e-25 119.8 84 71.4
CSS0027394 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 1.2e-25 119.8 84 71.4
ECA233G2512 Erigeron canadensis HOM05D006443 ORTHO05D007797 1.6e-25 119.4 81 70.4
Sed0007875 Sechium edule HOM05D006087 ORTHO05D007479 1.0e-24 116.7 93 61.3
Lalb_Chr23g0278081 Lupinus albus HOM05D006087 ORTHO05D007479 2.3e-24 115.5 95 58.9
arahy.Tifrunner.gnm1.ann1.1Z01XL Arachis hypogaea HOM05D006087 ORTHO05D007479 1.5e-23 112.8 99 57.6
MBI11_g44422_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 1.5e-23 112.8 100 62.0
Pp3c18_21810 Physcomitrium patens HOM05D006087 ORTHO05D007479 9.7e-23 110.2 100 55.0
Migut.E00016 Erythranthe guttata HOM05D006087 ORTHO05D007479 1.7e-22 109.4 92 57.6
ClCG08G017160 Citrullus lanatus HOM05D006087 ORTHO05D007479 6.3e-22 107.5 93 54.8
Pp3c22_5660 Physcomitrium patens HOM05D006087 ORTHO05D007479 6.3e-22 107.5 89 57.3
Pp3c21_520 Physcomitrium patens HOM05D006087 ORTHO05D007479 8.2e-22 107.1 91 54.9
MSTRG.8005 Avicennia marina HOM05D006087 ORTHO05D007479 1.1e-21 106.7 98 57.1
HPP92_024290 Vanilla planifolia HOM05D006087 ORTHO05D007479 1.4e-21 106.3 95 62.1
HPP92_024307 Vanilla planifolia HOM05D006087 ORTHO05D007479 1.8e-21 105.9 96 61.5
Pp3c14_11460 Physcomitrium patens HOM05D006087 ORTHO05D007479 5.3e-21 104.4 98 54.1
CsaV3_2G025430 Cucumis sativus L. HOM05D006087 ORTHO05D007479 1.0e-19 100.1 76 60.5
MBI11_g05327_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 2.2e-19 99.0 69 71.0
Pp3c17_7480 Physcomitrium patens HOM05D006087 ORTHO05D007479 2.3e-16 89.0 97 44.3
Zm00001eb180950 Zea mays HOM05D006087 ORTHO05D007479 5.7e-15 84.3 102 44.1
Hma1.2p1_0349F.1_g132260 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 9.7e-15 83.6 94 52.1
Zm00001eb241730 Zea mays HOM05D006087 ORTHO05D007479 1.7e-14 82.8 98 45.9
Os02g0506600 Oryza sativa ssp. japonica HOM05D006087 ORTHO05D007479 2.8e-14 82.0 101 47.5
Zm00001eb421040 Zea mays HOM05D006087 ORTHO05D007479 8.5e-11 70.5 102 44.1
Cre10.g432100 Chlamydomonas reinhardtii HOM05D006087 ORTHO05D007479 2.5e-10 68.9 50 60.0
MD16G1189100 Malus domestica HOM05D006087 ORTHO05D007479 4.7e-09 64.7 37 73.0
CDE05G3495 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 2.8e-06 55.5 57 52.6
MCO04G324 Micromonas commoda HOM05D002522 ORTHO05D002744 2.8e-06 55.5 61 37.7


User provided reference genes

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