Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_4g36470 Fragaria vesca HOM05D009517 ORTHO05D011612 1.1e-76 290.0 156 100.0
FAN12G1831 Fragaria x ananassa HOM05D009517 ORTHO05D011612 1.1e-76 290.0 156 100.0
FAN17G1386 Fragaria x ananassa HOM05D009517 ORTHO05D011612 3.4e-75 285.0 156 98.7
FAN07G2507 Fragaria x ananassa HOM05D009517 ORTHO05D011612 9.9e-75 283.5 156 98.1
FAN22G0198 Fragaria x ananassa HOM05D009517 ORTHO05D011612 1.2e-72 276.6 156 96.8
RcHm_v2.0_Chr4g0446231 Rosa chinensis HOM05D009517 ORTHO05D011612 3.5e-72 275.0 156 94.9
Prupe.1G343700 Prunus persica HOM05D009517 ORTHO05D011612 2.9e-50 202.2 153 77.8
Dinv26546 Davidia involucrata HOM05D009517 ORTHO05D011612 2.5e-41 172.6 137 73.7
MD13G1009000 Malus domestica HOM05D009517 ORTHO05D011612 9.3e-41 170.6 153 72.5
MD16G1007000 Malus domestica HOM05D009517 ORTHO05D011612 6.7e-39 164.5 153 69.9
Potri.008G145000 Populus trichocarpa HOM05D009517 ORTHO05D011612 9.7e-38 160.6 153 64.7
Potri.010G097100 Populus trichocarpa HOM05D009517 ORTHO05D011612 1.4e-36 156.8 153 64.1
Sabra10G0069600 Salix brachista HOM05D009517 ORTHO05D011612 2.4e-36 156.0 154 63.0
QL03p042931 Quercus lobata HOM05D009517 ORTHO05D011612 5.3e-36 154.8 134 68.7
MBI06_g19436_MAGBIO Magnolia biondii HOM05D009517 ORTHO05D011612 1.6e-32 143.3 153 62.7
TWI77G0330 Tripterygium wilfordii HOM05D009517 ORTHO05D011612 9.7e-30 134.0 152 59.2
CDE07G1492 Ceratophyllum demersum HOM05D009517 ORTHO05D011612 3.7e-29 132.1 135 60.0
PSO063G2919 Papaver somniferum HOM05D009517 ORTHO05D011612 4.8e-29 131.7 153 60.8
CDE04G1930 Ceratophyllum demersum HOM05D009517 ORTHO05D011612 6.3e-29 131.3 135 57.8
HPP92_008578 Vanilla planifolia HOM05D009517 ORTHO05D011612 6.3e-29 131.3 135 57.8
PSO782G3294 Papaver somniferum HOM05D009517 ORTHO05D011612 1.2e-27 127.1 152 60.5
Os04g0672300 Oryza sativa ssp. japonica HOM05D009517 ORTHO05D011612 5.9e-27 124.8 139 55.4
HPP92_008557 Vanilla planifolia HOM05D009517 ORTHO05D011612 5.9e-27 124.8 128 57.8
Nn3g18697 Nelumbo nucifera HOM05D009517 ORTHO05D011612 7.7e-27 124.4 115 63.5
MBI03_g22263_MAGBIO Magnolia biondii HOM05D009517 ORTHO05D011612 1.7e-21 106.7 125 53.6
Zm00001eb433470 Zea mays HOM05D009517 ORTHO05D011612 3.7e-21 105.5 140 55.7
CDE04G1647 Ceratophyllum demersum HOM05D009517 ORTHO05D011612 7.2e-17 91.3 137 45.3
Zm00001eb066620 Zea mays HOM05D009517 ORTHO05D011612 1.6e-16 90.1 140 50.0
HPP92_020782 Vanilla planifolia HOM05D009517 ORTHO05D011612 7.0e-12 74.7 92 53.3
ATR0762G059 Amborella trichopoda HOM05D009517 ORTHO05D011612 1.7e-10 70.1 150 36.7
Gohir.A10G015500 Gossypium hirsutum HOM05D004361 ORTHO05D004706 4.2e-09 65.5 158 32.3
Gohir.D10G015500 Gossypium hirsutum HOM05D004361 ORTHO05D004706 2.1e-08 63.2 165 33.3
Gorai.011G017100 Gossypium raimondii HOM05D004361 ORTHO05D004706 2.1e-08 63.2 165 33.3
MBI18_g06808_MAGBIO Magnolia biondii HOM05D004361 ORTHO05D004706 1.8e-07 60.1 138 35.5
SEGI_28007 Sequoiadendron giganteum HOM05D004505 ORTHO05D005249 8.8e-07 57.8 145 35.9
MBI02_g10098_MAGBIO Magnolia biondii HOM05D004361 ORTHO05D004706 1.2e-06 57.4 140 38.6
TAR629G1557 Trochodendron aralioides HOM05D004361 ORTHO05D004706 7.5e-06 54.7 167 34.1


User provided reference genes

Program Settings