Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G1487 Fragaria x ananassa HOM05D003636 ORTHO05D005160 6.5e-90 334.0 160 100.0
FvH4_4g02820 Fragaria vesca HOM05D003636 ORTHO05D005160 1.0e-87 326.6 157 100.0
FAN17G1850 Fragaria x ananassa HOM05D003636 ORTHO05D005160 1.0e-87 326.6 157 100.0
RcHm_v2.0_Chr5g0000461 Rosa chinensis HOM05D003636 ORTHO05D005160 3.0e-87 325.1 156 99.4
RcHm_v2.0_Chr4g0390791 Rosa chinensis HOM05D003636 ORTHO05D005160 4.0e-87 324.7 156 98.7
Prupe.1G031700 Prunus persica HOM05D003636 ORTHO05D005160 2.6e-78 295.4 156 88.5
MD16G1209600 Malus domestica HOM05D003636 ORTHO05D005160 2.4e-76 288.9 156 86.5
QL02p053474 Quercus lobata HOM05D003636 ORTHO05D005160 9.2e-76 287.0 156 85.9
MD13G1208100 Malus domestica HOM05D003636 ORTHO05D005160 1.6e-75 286.2 156 84.6
Atru.chr4.2209 Acer truncatum HOM05D003636 ORTHO05D005160 8.6e-74 280.4 155 85.8
TWI73G0437 Tripterygium wilfordii HOM05D003636 ORTHO05D005160 2.5e-73 278.9 155 83.9
Lj2g0003499 Lotus japonicus HOM05D003636 ORTHO05D005160 4.3e-73 278.1 155 84.5
Phvul.007G037800 Phaseolus vulgaris HOM05D003636 ORTHO05D005160 9.5e-73 276.9 156 84.0
Glyma.20G126100 Glycine max HOM05D003636 ORTHO05D005160 1.6e-72 276.2 156 84.0
Lj5g0001808 Lotus japonicus HOM05D003636 ORTHO05D005160 1.6e-72 276.2 155 83.9
MSTRG.4105 Avicennia marina HOM05D003636 ORTHO05D005160 2.8e-72 275.4 155 82.6
Ciclev10004361m.g Citrus clementina HOM05D003636 ORTHO05D005160 2.8e-72 275.4 155 83.9
Glyma.10G264200 Glycine max HOM05D003636 ORTHO05D005160 3.6e-72 275.0 156 83.3
TAR362G1191 Trochodendron aralioides HOM05D003636 ORTHO05D005160 4.7e-72 274.6 155 83.2
VMungo0720G2747 Vigna mungo HOM05D003636 ORTHO05D005160 6.1e-72 274.2 156 82.7
SalBow2G0018 Salvia bowleyana HOM05D003636 ORTHO05D005160 1.0e-71 273.5 155 81.3
GSVIVG01018130001 Vitis vinifera HOM05D003636 ORTHO05D005160 1.4e-71 273.1 157 82.2
Lalb_Chr21g0308481 Lupinus albus HOM05D003636 ORTHO05D005160 1.8e-71 272.7 156 81.4
Ca_11090_v3 Cicer arietinum L. HOM05D003636 ORTHO05D005160 2.3e-71 272.3 156 82.7
Ca_11092_v3 Cicer arietinum L. HOM05D003636 ORTHO05D005160 2.3e-71 272.3 156 82.7
arahy.Tifrunner.gnm1.ann1.7RJ7GD Arachis hypogaea HOM05D003636 ORTHO05D005160 4.0e-71 271.6 155 82.6
DCAR_024229 Daucus carota HOM05D003636 ORTHO05D005160 4.0e-71 271.6 155 80.0
Oeu002605.1 Olea europaea HOM05D003636 ORTHO05D005160 5.2e-71 271.2 155 80.6
THA.LOC104801942 Tarenaya hassleriana HOM05D003636 ORTHO05D005160 5.2e-71 271.2 154 81.8
unitig_736.g22446 Utricularia gibba HOM05D003636 ORTHO05D005160 5.2e-71 271.2 158 82.3
ClCG09G021970 Citrullus lanatus HOM05D003636 ORTHO05D005160 8.9e-71 270.4 155 81.9
MBI11_g20311_MAGBIO Magnolia biondii HOM05D003636 ORTHO05D005160 8.9e-71 270.4 155 81.3
Sed0019602 Sechium edule HOM05D003636 ORTHO05D005160 8.9e-71 270.4 155 81.9
arahy.Tifrunner.gnm1.ann1.T9EQBK Arachis hypogaea HOM05D003636 ORTHO05D005160 1.2e-70 270.0 155 81.9
Sc13g0005100 Simmondsia chinensis HOM05D003636 ORTHO05D005160 1.2e-70 270.0 155 82.6
Manes.02G210300 Manihot esculenta HOM05D003636 ORTHO05D005160 1.5e-70 269.6 155 80.6
Hund05016 Selenicereus undatus HOM05D003636 ORTHO05D005160 2.0e-70 269.2 155 80.6
Aqoxy2G03579 Aquilegia oxysepala HOM05D003636 ORTHO05D005160 2.6e-70 268.9 155 78.7
Ciclev10004498m.g Citrus clementina HOM05D003636 ORTHO05D005160 2.6e-70 268.9 157 81.5
Gohir.A06G066800 Gossypium hirsutum HOM05D003636 ORTHO05D005160 2.6e-70 268.9 155 81.3
Peaxi162Scf00813g00221 Petunia axillaris HOM05D003636 ORTHO05D005160 2.6e-70 268.9 155 80.6
Psat2g188680 Pisum sativum HOM05D003636 ORTHO05D005160 2.6e-70 268.9 157 80.9
TPR.G13854 Trifolium pratense HOM05D003636 ORTHO05D005160 2.6e-70 268.9 156 80.8
Cc03_g04930 Coffea canephora HOM05D003636 ORTHO05D005160 3.4e-70 268.5 155 80.6
Gorai.010G076500 Gossypium raimondii HOM05D003636 ORTHO05D005160 4.4e-70 268.1 155 81.3
CSS0043760 Camellia sinensis var. sinensis HOM05D003636 ORTHO05D005160 5.8e-70 267.7 155 80.6
ECA233G4087 Erigeron canadensis HOM05D003636 ORTHO05D005160 7.5e-70 267.3 155 79.4
Gohir.D06G065300 Gossypium hirsutum HOM05D003636 ORTHO05D005160 7.5e-70 267.3 155 80.6
Lj2A972G23 Lonicera japonica HOM05D003636 ORTHO05D005160 9.8e-70 266.9 155 80.6
THA.LOC104823120 Tarenaya hassleriana HOM05D003636 ORTHO05D005160 9.8e-70 266.9 154 81.2
PGR142G0130 Punica granatum HOM05D003636 ORTHO05D005160 1.3e-69 266.5 155 79.4
TPR.G3263 Trifolium pratense HOM05D003636 ORTHO05D005160 1.3e-69 266.5 156 79.5
Actinidia19047 Actinidia chinensis HOM05D003636 ORTHO05D005160 2.2e-69 265.8 155 79.4
Migut.G00443 Erythranthe guttata HOM05D003636 ORTHO05D005160 2.2e-69 265.8 155 78.7
Rhsim02G0033400 Rhododendron simsii HOM05D003636 ORTHO05D005160 2.2e-69 265.8 157 79.6
SGA_v2.0_scaffold101G29798 Striga asiatica HOM05D003636 ORTHO05D005160 2.9e-69 265.4 155 79.4
Aa31LG2G11570 Aethionema arabicum HOM05D003636 ORTHO05D005160 3.7e-69 265.0 155 79.4
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 3.7e-69 265.0 156 78.8
Medtr1g107575 Medicago truncatula HOM05D003636 ORTHO05D005160 3.7e-69 265.0 156 79.5
Potri.001G415900 Populus trichocarpa HOM05D003636 ORTHO05D005160 3.7e-69 265.0 155 80.0
ATR0665G579 Amborella trichopoda HOM05D003636 ORTHO05D005160 4.9e-69 264.6 154 77.3
CSS0010332 Camellia sinensis var. sinensis HOM05D003636 ORTHO05D005160 4.9e-69 264.6 155 80.0
CSS0030608 Camellia sinensis var. sinensis HOM05D003636 ORTHO05D005160 4.9e-69 264.6 155 80.0
Haze_11308 Corylus avellana HOM05D003636 ORTHO05D005160 4.9e-69 264.6 156 78.8
Haze_11311 Corylus avellana HOM05D003636 ORTHO05D005160 4.9e-69 264.6 156 78.8
HanXRQChr06g0181471 Helianthus annuus HOM05D003636 ORTHO05D005160 4.9e-69 264.6 155 78.7
HanXRQChr09g0258341 Helianthus annuus HOM05D003636 ORTHO05D005160 4.9e-69 264.6 155 78.7
AT1G56290 Arabidopsis thaliana HOM05D003636 ORTHO05D005160 6.4e-69 264.2 155 80.0
CAN.G1007.10 Capsicum annuum HOM05D003636 ORTHO05D005160 6.4e-69 264.2 155 78.1
Eucgr.G02714 Eucalyptus grandis HOM05D003636 ORTHO05D005160 6.4e-69 264.2 155 78.7
Cc01_g03130 Coffea canephora HOM05D003636 ORTHO05D005160 8.3e-69 263.8 155 80.0
Nitab4.5_0000525g0280 Nicotiana tabacum HOM05D003636 ORTHO05D005160 8.3e-69 263.8 156 78.2
Nitab4.5_0001418g0070 Nicotiana tabacum HOM05D003636 ORTHO05D005160 8.3e-69 263.8 156 78.2
Sabra16G0282600 Salix brachista HOM05D003636 ORTHO05D005160 8.3e-69 263.8 155 79.4
Dinv44639 Davidia involucrata HOM05D003636 ORTHO05D005160 1.1e-68 263.5 155 79.4
CSS0023771 Camellia sinensis var. sinensis HOM05D003636 ORTHO05D005160 1.9e-68 262.7 155 79.4
MELO3C015028.2 Cucumis melo HOM05D003636 ORTHO05D005160 1.9e-68 262.7 155 78.7
CsaV3_5G014730 Cucumis sativus L. HOM05D003636 ORTHO05D005160 1.9e-68 262.7 155 78.7
Cpa.g.sc58.55 Carica papaya HOM05D003636 ORTHO05D005160 2.4e-68 262.3 155 80.0
AL1G65900 Arabidopsis lyrata HOM05D003636 ORTHO05D005160 3.2e-68 261.9 155 79.4
BcaB07g31117 Brassica carinata HOM05D003636 ORTHO05D005160 3.2e-68 261.9 155 78.7
Psat6g220520 Pisum sativum HOM05D003636 ORTHO05D005160 3.2e-68 261.9 153 80.4
CSS0034908 Camellia sinensis var. sinensis HOM05D003636 ORTHO05D005160 4.1e-68 261.5 155 79.4
Thhalv10023321m.g Eutrema salsugineum HOM05D003636 ORTHO05D005160 4.1e-68 261.5 155 79.4
Rhsim07G0057600 Rhododendron simsii HOM05D003636 ORTHO05D005160 4.1e-68 261.5 157 77.1
EL10Ac2g04633 Beta vulgaris HOM05D003636 ORTHO05D005160 5.4e-68 261.2 157 77.1
A09p19180 Brassica napus HOM05D003636 ORTHO05D005160 5.4e-68 261.2 155 78.1
Solyc09g083420.3 Solanum lycopersicum HOM05D003636 ORTHO05D005160 7.0e-68 260.8 155 76.1
Sopen09g032360 Solanum pennellii HOM05D003636 ORTHO05D005160 7.0e-68 260.8 155 75.5
PGSC0003DMG400015117 Solanum tuberosum HOM05D003636 ORTHO05D005160 9.2e-68 260.4 155 75.5
BcaC04g22040 Brassica carinata HOM05D003636 ORTHO05D005160 1.2e-67 260.0 155 77.4
C09p24190 Brassica napus HOM05D003636 ORTHO05D005160 1.2e-67 260.0 155 77.4
Carub.0002s0788 Capsella rubella HOM05D003636 ORTHO05D005160 1.6e-67 259.6 155 78.1
CiPaw.02G116000 Carya illinoinensis HOM05D003636 ORTHO05D005160 3.5e-67 258.5 155 80.0
Lsat_1_v5_gn_5_72980 Lactuca sativa HOM05D003636 ORTHO05D005160 4.6e-67 258.1 156 78.2
Psat2g188400 Pisum sativum HOM05D003636 ORTHO05D005160 7.8e-67 257.3 150 80.7
CARHR289840 Cardamine hirsuta HOM05D003636 ORTHO05D005160 1.0e-66 256.9 154 77.9
CDE06G0563 Ceratophyllum demersum HOM05D003636 ORTHO05D005160 1.0e-66 256.9 155 76.1
AUR62014577 Chenopodium quinoa HOM05D003636 ORTHO05D005160 1.7e-66 256.1 157 75.2
AUR62039385 Chenopodium quinoa HOM05D003636 ORTHO05D005160 2.3e-66 255.8 157 75.2
Manes.02G214300 Manihot esculenta HOM05D003636 ORTHO05D005160 2.3e-66 255.8 155 76.8
Hund02552 Selenicereus undatus HOM05D003636 ORTHO05D005160 3.0e-66 255.4 155 75.5
Dinv44638 Davidia involucrata HOM05D003636 ORTHO05D005160 5.0e-66 254.6 157 76.4
vmacro15411 Vaccinium macrocarpon HOM05D003636 ORTHO05D005160 5.0e-66 254.6 182 69.2
PSO170G0718 Papaver somniferum HOM05D003636 ORTHO05D005160 8.6e-66 253.8 156 75.0
COL.COLO4_15803 Corchorus olitorius HOM05D003636 ORTHO05D005160 1.5e-65 253.1 163 73.6
PSO017G1763 Papaver somniferum HOM05D003636 ORTHO05D005160 1.9e-65 252.7 156 75.0
Hund11200 Selenicereus undatus HOM05D003636 ORTHO05D005160 2.5e-65 252.3 155 74.8
Hma1.2p1_1276F.1_g272050 Hydrangea macrophylla HOM05D003636 ORTHO05D005160 3.3e-65 251.9 155 73.5
Nitab4.5_0000026g0370 Nicotiana tabacum HOM05D003636 ORTHO05D005160 4.3e-65 251.5 155 76.1
Psat0s986g0040 Pisum sativum HOM05D003636 ORTHO05D005160 7.3e-65 250.8 157 72.0
Dinv02719 Davidia involucrata HOM05D003636 ORTHO05D005160 1.6e-64 249.6 155 74.8
SEGI_36314 Sequoiadendron giganteum HOM05D003636 ORTHO05D005160 2.1e-64 249.2 154 74.7
Hma1.2p1_1798F.1_g302870 Hydrangea macrophylla HOM05D003636 ORTHO05D005160 3.6e-64 248.4 155 72.3
EL10Ac2g03737 Beta vulgaris HOM05D003636 ORTHO05D005160 6.2e-64 247.7 161 74.5
THA.LOC104823115 Tarenaya hassleriana HOM05D003636 ORTHO05D005160 1.2e-62 243.4 139 80.6
CiPaw.02G115900 Carya illinoinensis HOM05D003636 ORTHO05D005160 4.4e-62 241.5 128 90.6
Dinv00242 Davidia involucrata HOM05D003636 ORTHO05D005160 9.8e-62 240.4 155 72.9
Hund02549 Selenicereus undatus HOM05D003636 ORTHO05D005160 1.2e-59 233.4 155 69.7
Ah.09g223830 Amaranthus hybridus HOM05D003636 ORTHO05D005160 2.1e-59 232.6 180 62.2
Zm00001eb056720 Zea mays HOM05D003636 ORTHO05D005160 4.3e-57 224.9 155 65.2
CBR_g41119 Chara braunii HOM05D003636 ORTHO05D005160 7.3e-57 224.2 154 63.6
Mapoly0080s0020 Marchantia polymorpha HOM05D003636 ORTHO05D005160 4.7e-56 221.5 154 66.2
SpUn1110_0010 Schrenkiella parvula HOM05D003636 ORTHO05D005160 8.1e-56 220.7 124 81.5
Os03g0740700 Oryza sativa ssp. japonica HOM05D003636 ORTHO05D005160 1.4e-55 219.9 154 64.3
HPP92_018388 Vanilla planifolia HOM05D003636 ORTHO05D005160 1.4e-55 219.9 154 66.9
SMO356G0642 Selaginella moellendorffii HOM05D003636 ORTHO05D005160 4.4e-54 214.9 160 61.9
Duzib138G1962 Durio zibethinus HOM05D003636 ORTHO05D005160 1.1e-52 210.3 127 78.7
CANSAT11G0466 Cannabis sativa HOM05D003636 ORTHO05D005160 1.4e-52 209.9 158 62.7
Haze_21469 Corylus avellana HOM05D003636 ORTHO05D005160 1.2e-51 206.8 190 54.7
Thecc.K0000100 Theobroma cacao HOM05D003636 ORTHO05D005160 1.6e-51 206.5 172 58.7
Pp3c6_28790 Physcomitrium patens HOM05D003636 ORTHO05D005160 1.1e-49 200.3 154 58.4
Nn1g02632 Nelumbo nucifera HOM05D003636 ORTHO05D005160 1.8e-47 193.0 107 83.2
Hma1.2p1_2670F.1_g326620 Hydrangea macrophylla HOM05D003636 ORTHO05D005160 3.8e-45 185.3 113 74.3
AagrBONN_evm.TU.Sc2ySwM_228.671 Anthoceros agrestis HOM05D003636 ORTHO05D005160 2.4e-44 182.6 155 56.1
Rhsim10G0205300 Rhododendron simsii HOM05D003636 ORTHO05D005160 1.9e-41 172.9 113 71.7
EL10Ac2g04632 Beta vulgaris HOM05D003636 ORTHO05D005160 4.7e-40 168.3 112 71.4
Actinidia05462 Actinidia chinensis HOM05D003636 ORTHO05D005160 6.2e-40 167.9 155 57.4
MCO13G162 Micromonas commoda HOM05D003636 ORTHO05D005160 4.4e-38 161.8 162 50.0
Cre17.g741550 Chlamydomonas reinhardtii HOM05D003636 ORTHO05D005160 8.4e-37 157.5 155 48.4
ATR0681G292 Amborella trichopoda HOM05D003636 ORTHO05D005160 1.9e-36 156.4 118 56.8
PRCOL_00006475 Prasinoderma coloniale HOM05D003636 ORTHO05D005160 1.1e-31 140.6 156 45.5
Rhsim04G0219300 Rhododendron simsii HOM05D003636 ORTHO05D005160 5.4e-28 128.3 93 62.4
Rhsim10G0205200 Rhododendron simsii HOM05D003636 ORTHO05D005160 2.7e-27 125.9 72 79.2
Rhsim03G0051600 Rhododendron simsii HOM05D003636 ORTHO05D005160 3.5e-27 125.6 88 65.9
Rhsim03G0051200 Rhododendron simsii HOM05D003636 ORTHO05D005160 6.0e-27 124.8 89 64.0
ATR0691G272 Amborella trichopoda HOM05D003636 ORTHO05D005160 3.7e-24 115.5 99 59.6
RhsimUnG0153000 Rhododendron simsii HOM05D003636 ORTHO05D000058 6.2e-24 114.8 68 76.5
RhsimUnG0153100 Rhododendron simsii HOM05D003636 ORTHO05D000058 6.2e-24 114.8 68 76.5
QL06p015868 Quercus lobata HOM05D003636 ORTHO05D005160 1.4e-23 113.6 81 63.0
CARHR172220 Cardamine hirsuta HOM05D003636 ORTHO05D005160 1.9e-20 103.2 57 82.5
Cfa026320 Carpinus fangiana HOM05D003636 ORTHO05D005160 1.0e-18 97.4 157 36.9
Lj2C973G0 Lonicera japonica HOM05D003636 ORTHO05D005160 1.3e-18 97.1 64 65.6
Psat6g146280 Pisum sativum HOM05D003636 ORTHO05D005160 1.3e-18 97.1 54 83.3
TAR633G0237 Trochodendron aralioides HOM05D006365 ORTHO05D007893 1.5e-06 57.0 28 92.9


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