Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G1480 Fragaria x ananassa HOM05D000007 ORTHO05D005026 2.5e-74 282.0 137 100.0
FAN17G2796 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.3e-57 226.5 160 70.6
FAN17G2956 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.3e-57 226.5 160 70.6
FAN12G2131 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.2e-39 166.8 80 96.2
FAN07G0026 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.8e-32 142.9 142 52.8
MD11G1203000 Malus domestica HOM05D000007 ORTHO05D005026 7.7e-15 84.3 151 40.4
Prupe.4G237500 Prunus persica HOM05D000007 ORTHO05D005026 4.2e-13 78.6 151 36.4
Prupe.6G125500 Prunus persica HOM05D000007 ORTHO05D005026 9.4e-13 77.4 134 38.8
MD11G1202700 Malus domestica HOM05D000007 ORTHO05D005026 1.2e-12 77.0 147 36.7
FAN23G0799 Fragaria x ananassa HOM05D000007 ORTHO05D005026 2.3e-11 72.8 157 34.4
MD03G1192800 Malus domestica HOM05D000007 ORTHO05D005026 2.3e-11 72.8 152 38.2
MD03G1139900 Malus domestica HOM05D000007 ORTHO05D005026 4.0e-11 72.0 152 38.2
FAN26G1005 Fragaria x ananassa HOM05D000007 ORTHO05D005026 8.8e-11 70.9 137 35.0
MD03G1104200 Malus domestica HOM05D000007 ORTHO05D005026 2.6e-10 69.3 165 33.9
FAN25G1358 Fragaria x ananassa HOM05D000007 ORTHO05D005026 3.4e-10 68.9 144 36.8
RcHm_v2.0_Chr7g0231281 Rosa chinensis HOM05D000007 ORTHO05D005026 3.4e-10 68.9 146 37.0
RcHm_v2.0_Chr2g0090941 Rosa chinensis HOM05D000007 ORTHO05D005026 9.8e-10 67.4 149 34.9
RcHm_v2.0_Chr2g0092791 Rosa chinensis HOM05D000007 ORTHO05D005026 9.8e-10 67.4 140 37.9
RcHm_v2.0_Chr2g0090951 Rosa chinensis HOM05D000007 ORTHO05D005026 1.7e-09 66.6 149 34.2
FAN26G1387 Fragaria x ananassa HOM05D000007 ORTHO05D005026 2.8e-09 65.9 158 33.5
RcHm_v2.0_Chr7g0231301 Rosa chinensis HOM05D000007 ORTHO05D005026 3.7e-09 65.5 149 35.6
FvH4_5g38210 Fragaria vesca HOM05D000007 ORTHO05D005026 6.3e-09 64.7 138 33.3
FAN26G0824 Fragaria x ananassa HOM05D000007 ORTHO05D005026 6.3e-09 64.7 158 32.9
FAN10G0833 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.8e-08 63.2 152 32.2
FAN19G1652 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.8e-08 63.2 149 32.9
FvH4_1g05230 Fragaria vesca HOM05D000007 ORTHO05D005026 3.1e-08 62.4 149 32.9
FAN01G0498 Fragaria x ananassa HOM05D000007 ORTHO05D005026 4.1e-08 62.0 120 30.8
FAN23G1105 Fragaria x ananassa HOM05D000007 ORTHO05D005026 4.1e-08 62.0 139 32.4
FAN26G3325 Fragaria x ananassa HOM05D000007 ORTHO05D005026 4.1e-08 62.0 144 32.6
FAN03G2383 Fragaria x ananassa HOM05D000007 ORTHO05D005026 5.4e-08 61.6 151 31.8
FAN06G3469 Fragaria x ananassa HOM05D000007 ORTHO05D005026 5.4e-08 61.6 136 30.1
FAN06G4337 Fragaria x ananassa HOM05D000007 ORTHO05D005026 5.4e-08 61.6 136 30.1
RcHm_v2.0_Chr5g0072021 Rosa chinensis HOM05D000007 ORTHO05D005026 1.2e-07 60.5 156 32.7
FAN28G0211 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.6e-07 60.1 116 32.8
RcHm_v2.0_Chr0c44g0503541 Rosa chinensis HOM05D000007 ORTHO05D005026 1.6e-07 60.1 137 38.0
RcHm_v2.0_Chr2g0170021 Rosa chinensis HOM05D000007 ORTHO05D005026 1.6e-07 60.1 137 38.0
PSO017G5170 Papaver somniferum HOM05D000007 ORTHO05D000017 2.0e-07 59.7 148 32.4
RcHm_v2.0_Chr2g0169971 Rosa chinensis HOM05D000007 ORTHO05D005026 2.0e-07 59.7 142 36.6
RcHm_v2.0_Chr4g0386281 Rosa chinensis HOM05D000007 ORTHO05D005026 2.0e-07 59.7 137 38.0
FAN19G1737 Fragaria x ananassa HOM05D000007 ORTHO05D005026 2.7e-07 59.3 120 33.3
FAN28G2582 Fragaria x ananassa HOM05D000007 ORTHO05D005026 2.7e-07 59.3 134 33.6
FAN03G0960 Fragaria x ananassa HOM05D000007 ORTHO05D005026 3.5e-07 58.9 152 30.9
FAN17G1529 Fragaria x ananassa HOM05D000007 ORTHO05D005026 4.5e-07 58.5 155 32.9
FAN23G0826 Fragaria x ananassa HOM05D000007 ORTHO05D005026 4.5e-07 58.5 155 31.6
FAN19G3004 Fragaria x ananassa HOM05D000007 ORTHO05D005026 5.9e-07 58.2 136 31.6
FAN19G0854 Fragaria x ananassa HOM05D000007 ORTHO05D005026 7.7e-07 57.8 155 30.3
FAN21G2664 Fragaria x ananassa HOM05D000007 ORTHO05D005026 7.7e-07 57.8 169 32.0
FAN19G2482 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.0e-06 57.4 163 28.8
FvH4_1g04511 Fragaria vesca HOM05D000007 ORTHO05D005026 1.3e-06 57.0 136 31.6
FAN06G3806 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.3e-06 57.0 137 30.7
FAN11G0875 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.3e-06 57.0 169 32.0
FAN16G0430 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.3e-06 57.0 169 32.0
FAN28G0694 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.3e-06 57.0 155 31.0
RcHm_v2.0_Chr2g0099041 Rosa chinensis HOM05D000007 ORTHO05D005026 1.3e-06 57.0 56 53.6
RcHm_v2.0_Chr5g0072031 Rosa chinensis HOM05D000007 ORTHO05D005026 2.3e-06 56.2 143 30.8
FvH4_3g40020 Fragaria vesca HOM05D000007 ORTHO05D005026 2.9e-06 55.8 169 32.0
FvH4_4g32891 Fragaria vesca HOM05D000007 ORTHO05D005026 5.0e-06 55.1 152 31.6
PGR083G2034 Punica granatum HOM05D000007 ORTHO05D000017 5.0e-06 55.1 155 31.0
ECA234G2035 Erigeron canadensis HOM05D000007 ORTHO05D000017 8.6e-06 54.3 138 30.4
FvH4_3g40031 Fragaria vesca HOM05D000007 ORTHO05D005026 8.6e-06 54.3 167 32.3


User provided reference genes

Program Settings