Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G0751 Fragaria x ananassa HOM05D005473 ORTHO05D006543 3.7e-194 681.4 358 100.0
FAN12G1468 Fragaria x ananassa HOM05D005473 ORTHO05D006543 3.7e-194 681.4 358 100.0
FvH4_4g26380 Fragaria vesca HOM05D005473 ORTHO05D006543 4.9e-194 681.0 358 99.7
FAN22G1873 Fragaria x ananassa HOM05D005473 ORTHO05D006543 7.3e-190 667.2 358 98.3
FAN07G2597 Fragaria x ananassa HOM05D005473 ORTHO05D006543 2.8e-189 665.2 358 97.8
FAN17G2750 Fragaria x ananassa HOM05D005473 ORTHO05D006543 2.0e-187 659.1 358 96.9
RcHm_v2.0_Chr4g0434011 Rosa chinensis HOM05D005473 ORTHO05D006543 4.6e-176 621.3 357 90.2
Prupe.1G320100 Prunus persica HOM05D005473 ORTHO05D006543 2.5e-150 535.8 365 78.4
QL01p003042 Quercus lobata HOM05D005473 ORTHO05D006543 2.7e-128 462.6 364 67.0
Dinv04903 Davidia involucrata HOM05D005473 ORTHO05D006543 5.9e-123 444.9 365 64.7
CSS0031478 Camellia sinensis var. sinensis HOM05D005473 ORTHO05D006543 2.9e-122 442.6 343 67.1
Cfa015813 Carpinus fangiana HOM05D000048 ORTHO05D000207 1.1e-121 440.7 365 63.0
GSVIVG01011804001 Vitis vinifera HOM05D005473 ORTHO05D006543 1.2e-120 437.2 365 64.4
TAR622G1045 Trochodendron aralioides HOM05D005473 ORTHO05D006543 2.1e-120 436.4 360 64.2
CiPaw.05G245400 Carya illinoinensis HOM05D005473 ORTHO05D006543 2.7e-120 436.0 366 63.7
Ciclev10015542m.g Citrus clementina HOM05D005473 ORTHO05D006543 8.8e-119 431.0 368 63.9
Potri.008G126400 Populus trichocarpa HOM05D005473 ORTHO05D006543 8.8e-119 431.0 361 61.5
MSTRG.875 Avicennia marina HOM05D005473 ORTHO05D006543 3.3e-118 429.1 365 63.0
Hma1.2p1_0114F.1_g055460 Hydrangea macrophylla HOM05D005473 ORTHO05D006543 3.7e-117 425.6 360 63.1
Haze_00685 Corylus avellana HOM05D005473 ORTHO05D006543 1.1e-116 424.1 406 57.4
arahy.Tifrunner.gnm1.ann1.GULV0C Arachis hypogaea HOM05D005473 ORTHO05D006543 1.4e-116 423.7 365 63.0
arahy.Tifrunner.gnm1.ann1.45PR62 Arachis hypogaea HOM05D005473 ORTHO05D006543 1.8e-116 423.3 365 63.0
Sed0015008 Sechium edule HOM05D005473 ORTHO05D006543 9.1e-116 421.0 363 60.6
ClCG05G022330 Citrullus lanatus HOM05D005473 ORTHO05D006543 1.2e-115 420.6 365 62.2
Sabra08G0095200 Salix brachista HOM05D005473 ORTHO05D006543 1.6e-115 420.2 358 61.2
Lj5g0028089 Lotus japonicus HOM05D005473 ORTHO05D006543 4.5e-115 418.7 364 60.7
Thecc.02G215500 Theobroma cacao HOM05D005473 ORTHO05D006543 1.7e-114 416.8 367 60.5
COL.COLO4_20121 Corchorus olitorius HOM05D005473 ORTHO05D006543 6.5e-114 414.8 365 60.3
Gohir.D05G319500 Gossypium hirsutum HOM05D005473 ORTHO05D006543 6.5e-114 414.8 366 60.4
TPR.G4908 Trifolium pratense HOM05D005473 ORTHO05D006543 6.5e-114 414.8 359 61.3
CsaV3_5G034770 Cucumis sativus L. HOM05D005473 ORTHO05D006543 1.1e-113 414.1 366 60.7
Glyma.20G123200 Glycine max HOM05D005473 ORTHO05D006543 1.1e-113 414.1 365 62.5
Atru.chr11.335 Acer truncatum HOM05D005473 ORTHO05D006543 1.5e-113 413.7 367 61.0
Gorai.009G342800 Gossypium raimondii HOM05D005473 ORTHO05D006543 2.5e-113 412.9 367 60.8
Ca_30210_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 3.2e-113 412.5 362 61.0
Lalb_Chr06g0165731 Lupinus albus HOM05D005473 ORTHO05D006543 3.2e-113 412.5 360 60.8
Sabra16G0274100 Salix brachista HOM05D005473 ORTHO05D006543 1.2e-112 410.6 358 60.1
Manes.14G109600 Manihot esculenta HOM05D005473 ORTHO05D006543 3.6e-112 409.1 364 59.3
vmacro01424 Vaccinium macrocarpon HOM05D005473 ORTHO05D006543 8.0e-112 407.9 370 58.9
Cpa.g.sc65.93 Carica papaya HOM05D005473 ORTHO05D006543 1.8e-111 406.8 357 62.5
Medtr1g109070 Medicago truncatula HOM05D005473 ORTHO05D006543 1.8e-111 406.8 358 60.9
SalBow8G1667 Salvia bowleyana HOM05D005473 ORTHO05D006543 1.8e-111 406.8 361 59.6
PGSC0003DMG400030516 Solanum tuberosum HOM05D005473 ORTHO05D006543 2.3e-111 406.4 357 60.5
Gohir.A05G317600 Gossypium hirsutum HOM05D005473 ORTHO05D006543 3.0e-111 406.0 365 59.2
Psat6g222680 Pisum sativum HOM05D005473 ORTHO05D006543 6.7e-111 404.8 356 60.1
Phvul.007G034400 Phaseolus vulgaris HOM05D005473 ORTHO05D006543 8.8e-111 404.4 368 60.6
Solyc05g008520.3 Solanum lycopersicum HOM05D005473 ORTHO05D006543 1.5e-110 403.7 357 60.2
VMungo0720G0454 Vigna mungo HOM05D005473 ORTHO05D006543 9.7e-110 401.0 363 60.3
Migut.L01020 Erythranthe guttata HOM05D005473 ORTHO05D006543 1.3e-109 400.6 359 60.7
Sopen05g004360 Solanum pennellii HOM05D005473 ORTHO05D006543 1.3e-109 400.6 343 62.1
Nn4g24024 Nelumbo nucifera HOM05D005473 ORTHO05D006543 2.8e-109 399.4 364 58.5
CAN.G1489.13 Capsicum annuum HOM05D005473 ORTHO05D006543 6.3e-109 398.3 363 58.7
Oeu059511.2 Olea europaea HOM05D005473 ORTHO05D006543 6.3e-109 398.3 347 60.5
Cc11_g09260 Coffea canephora HOM05D005473 ORTHO05D006543 1.6e-107 393.7 349 60.2
CANSAT01G2653 Cannabis sativa HOM05D005473 ORTHO05D006543 5.9e-107 391.7 361 60.1
Rhsim12G0088500 Rhododendron simsii HOM05D005473 ORTHO05D006543 1.1e-105 387.5 406 53.9
Dinv16166 Davidia involucrata HOM05D005473 ORTHO05D006543 1.2e-104 384.0 360 57.8
ECA246G4292 Erigeron canadensis HOM05D005473 ORTHO05D006543 1.2e-104 384.0 361 56.5
Atru.chr11.342 Acer truncatum HOM05D005473 ORTHO05D006543 1.6e-104 383.6 342 60.2
Eucgr.K00649 Eucalyptus grandis HOM05D005473 ORTHO05D006543 6.1e-104 381.7 362 57.2
Actinidia31990 Actinidia chinensis HOM05D005473 ORTHO05D006543 1.4e-103 380.6 320 63.1
PGR119G2355 Punica granatum HOM05D005473 ORTHO05D006543 1.8e-103 380.2 365 56.4
HanXRQChr15g0477691 Helianthus annuus HOM05D005473 ORTHO05D006543 2.0e-102 376.7 343 56.6
Sc11g0003970 Simmondsia chinensis HOM05D005473 ORTHO05D006543 2.6e-102 376.3 345 57.7
Lj3A877T94 Lonicera japonica HOM05D005473 ORTHO05D006543 3.4e-102 375.9 409 51.3
Lsat_1_v5_gn_3_54040 Lactuca sativa HOM05D005473 ORTHO05D006543 1.3e-101 374.0 366 53.6
SGA_v2.0_scaffold50G18546 Striga asiatica HOM05D005473 ORTHO05D006543 2.4e-100 369.8 341 58.4
Aa31LG7G6980 Aethionema arabicum HOM05D005473 ORTHO05D006543 4.1e-100 369.0 367 53.1
Peaxi162Scf00205g01024 Petunia axillaris HOM05D000048 ORTHO05D006543 2.0e-99 366.7 335 58.8
AUR62037258 Chenopodium quinoa HOM05D005473 ORTHO05D006543 3.5e-99 365.9 340 56.8
AUR62002772 Chenopodium quinoa HOM05D005473 ORTHO05D006543 5.9e-99 365.2 339 56.6
AL1G36530 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 1.7e-98 363.6 360 54.2
Ah.03g138500 Amaranthus hybridus HOM05D005473 ORTHO05D006543 2.3e-98 363.2 344 54.9
A09p41740 Brassica napus HOM05D005473 ORTHO05D006543 1.5e-97 360.5 360 53.9
BraA07t31315Z Brassica rapa HOM05D005473 ORTHO05D006543 4.2e-97 359.0 358 52.8
BraA09t39663Z Brassica rapa HOM05D005473 ORTHO05D006543 1.2e-96 357.5 361 52.6
PSO017G4790 Papaver somniferum HOM05D005473 ORTHO05D006543 2.1e-96 356.7 348 55.2
AT1G22970 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 4.7e-96 355.5 364 53.6
C05p22180 Brassica napus HOM05D005473 ORTHO05D006543 1.2e-94 350.9 363 52.6
Carub.0001s2247 Capsella rubella HOM05D005473 ORTHO05D006543 2.0e-94 350.1 360 52.5
CARHR023350 Cardamine hirsuta HOM05D005473 ORTHO05D006543 2.0e-94 350.1 360 51.7
EL10Ac6g14276 Beta vulgaris HOM05D005473 ORTHO05D006543 4.4e-94 349.0 370 51.9
Ca_23703_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 5.7e-94 348.6 362 54.1
Thhalv10008033m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 9.8e-94 347.8 360 52.2
AL2G30760 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 1.1e-92 344.4 359 52.1
MBI16_g29822_MAGBIO Magnolia biondii HOM05D005473 ORTHO05D006543 1.1e-92 344.4 368 52.4
BcaB07g32295 Brassica carinata HOM05D005473 ORTHO05D006543 1.4e-92 344.0 343 53.9
PSO782G5692 Papaver somniferum HOM05D005473 ORTHO05D006543 4.1e-92 342.4 352 53.4
MELO3C012289.2 Cucumis melo HOM05D005473 ORTHO05D006543 2.0e-91 340.1 307 59.9
PSO478G0709 Papaver somniferum HOM05D005473 ORTHO05D006543 3.5e-91 339.3 352 53.7
DCAR_023622 Daucus carota HOM05D005473 ORTHO05D006543 1.7e-90 337.0 307 62.2
Sp5g26320 Schrenkiella parvula HOM05D005473 ORTHO05D006543 5.0e-90 335.5 363 50.4
BolC5t30918H Brassica oleracea HOM05D005473 ORTHO05D006543 1.1e-89 334.3 363 49.9
THA.LOC104812031 Tarenaya hassleriana HOM05D005473 ORTHO05D006543 1.1e-89 334.3 298 59.4
BcaC05g26209 Brassica carinata HOM05D005473 ORTHO05D006543 1.9e-89 333.6 363 49.9
Nitab4.5_0013146g0010 Nicotiana tabacum HOM05D005473 ORTHO05D006543 2.1e-88 330.1 302 58.9
Aqoxy5G03875 Aquilegia oxysepala HOM05D005473 ORTHO05D006543 4.7e-88 328.9 357 51.3
AT1G71150 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 2.3e-87 326.6 359 51.0
CARHR064450 Cardamine hirsuta HOM05D005473 ORTHO05D006543 3.0e-87 326.2 359 48.7
BcaC08g46554 Brassica carinata HOM05D005473 ORTHO05D006543 1.5e-86 323.9 349 50.7
Potri.010G117100 Populus trichocarpa HOM05D005473 ORTHO05D006543 5.8e-86 322.0 318 55.7
BolC6t39580H Brassica oleracea HOM05D005473 ORTHO05D006543 1.1e-84 317.8 344 50.9
Sp1g20430 Schrenkiella parvula HOM05D005473 ORTHO05D006543 9.2e-84 314.7 360 48.9
Carub.0002s1804 Capsella rubella HOM05D005473 ORTHO05D006543 5.0e-82 308.9 359 47.9
BcaB03g14874 Brassica carinata HOM05D005473 ORTHO05D006543 1.5e-81 307.4 314 53.2
ATR0691G101 Amborella trichopoda HOM05D005473 ORTHO05D006543 9.5e-81 304.7 375 46.1
Duzib268G1740 Durio zibethinus HOM05D005473 ORTHO05D006543 5.2e-79 298.9 286 58.7
TWI79G1332 Tripterygium wilfordii HOM05D005473 ORTHO05D006543 1.2e-78 297.7 345 49.3
CDE07G0910 Ceratophyllum demersum HOM05D005473 ORTHO05D006543 2.7e-75 286.6 336 45.2
HPP92_020137 Vanilla planifolia HOM05D005473 ORTHO05D006543 2.7e-75 286.6 347 46.4
unitig_749.g14005 Utricularia gibba HOM05D005473 ORTHO05D006543 1.9e-73 280.4 282 56.4
A07p37530 Brassica napus HOM05D000048 ORTHO05D006543 3.4e-70 269.6 356 42.7
Os05g0554500 Oryza sativa ssp. japonica HOM05D005473 ORTHO05D006543 4.1e-68 262.7 351 42.2
Zm00001eb295130 Zea mays HOM05D005473 ORTHO05D006543 4.1e-68 262.7 358 43.6
AT1G22980 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 1.9e-65 253.8 342 43.0
Glyma.10G267900 Glycine max HOM05D005473 ORTHO05D006543 1.9e-65 253.8 245 58.8
Thhalv10018995m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 7.3e-65 251.9 274 53.3
AL1G36540 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 6.2e-64 248.8 342 43.3
Migut.O00950 Erythranthe guttata HOM05D005473 ORTHO05D006543 2.2e-61 240.4 229 60.3
Thecc.02G215400 Theobroma cacao HOM05D005473 ORTHO05D006543 1.9e-60 237.3 242 53.3
SEGI_09717 Sequoiadendron giganteum HOM05D005473 ORTHO05D006543 3.9e-58 229.6 353 40.2
Actinidia33629 Actinidia chinensis HOM05D005473 ORTHO05D006543 1.1e-57 228.0 242 53.3
A01p19890 Brassica napus HOM05D005473 ORTHO05D006543 4.7e-56 222.6 235 51.9
HanXRQChr15g0477701 Helianthus annuus HOM05D005473 ORTHO05D006543 9.0e-55 218.4 345 38.8
Duzib251G0055 Durio zibethinus HOM05D005473 ORTHO05D006543 9.6e-49 198.4 274 46.4
PSO384G2466 Papaver somniferum HOM05D005473 ORTHO05D006543 9.9e-46 188.3 298 39.6
SMO202G0044 Selaginella moellendorffii HOM05D005473 ORTHO05D006543 4.6e-43 179.5 308 37.7
Rhsim03G0134600 Rhododendron simsii HOM05D005473 ORTHO05D006543 2.3e-42 177.2 224 49.6
AagrBONN_evm.TU.Sc2ySwM_344.5342 Anthoceros agrestis HOM05D005473 ORTHO05D006543 2.9e-37 160.2 357 30.8
C06p45240 Brassica napus HOM05D000048 ORTHO05D000207 3.0e-34 150.2 134 53.7
C06p45250 Brassica napus HOM05D005473 ORTHO05D006543 1.5e-33 147.9 184 47.3
Hund25017 Selenicereus undatus HOM05D005473 ORTHO05D006543 3.7e-32 143.3 129 53.5
Pp3c15_5840 Physcomitrium patens HOM05D005473 ORTHO05D006543 1.4e-31 141.4 426 27.0
PSO339G4228 Papaver somniferum HOM05D005473 ORTHO05D006543 9.0e-31 138.7 371 29.9
Oeu036129.1 Olea europaea HOM05D005473 ORTHO05D006543 6.0e-27 125.9 148 54.7
CBR_g3993 Chara braunii HOM05D005493 ORTHO05D007154 2.3e-18 97.4 171 38.6
MD13G1032300 Malus domestica HOM05D005473 ORTHO05D006543 2.6e-14 84.0 56 69.6
MD16G1034500 Malus domestica HOM05D005473 ORTHO05D006543 3.4e-14 83.6 56 69.6
MSTRG.15906 Avicennia marina HOM05D005473 ORTHO05D006543 1.0e-13 82.0 55 67.3
CAN.G572.16 Capsicum annuum HOM05D005473 ORTHO05D006543 6.1e-11 72.8 144 34.0
AagrBONN_evm.TU.Sc2ySwM_117.2697 Anthoceros agrestis HOM05D005473 ORTHO05D006543 6.7e-10 69.3 177 32.2
MCO05G366 Micromonas commoda HOM05D005473 ORTHO05D006543 2.4e-07 60.8 290 23.8


User provided reference genes

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