Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G1413 Fragaria x ananassa HOM05D004296 ORTHO05D005045 3.6e-128 461.8 278 100.0
FvH4_4g36830 Fragaria vesca HOM05D004296 ORTHO05D005045 2.1e-123 446.0 278 97.5
FAN17G1800 Fragaria x ananassa HOM05D004296 ORTHO05D005045 1.2e-120 436.8 277 94.6
FAN07G0122 Fragaria x ananassa HOM05D004296 ORTHO05D005045 1.5e-113 413.3 276 92.0
FAN07G0166 Fragaria x ananassa HOM05D004296 ORTHO05D005045 1.2e-112 410.2 276 78.6
RcHm_v2.0_Chr7g0197731 Rosa chinensis HOM05D004296 ORTHO05D005045 1.1e-108 397.1 277 78.7
FAN12G3540 Fragaria x ananassa HOM05D004296 ORTHO05D005045 1.0e-106 390.6 276 76.1
FAN04G1575 Fragaria x ananassa HOM05D004296 ORTHO05D005045 3.8e-101 372.1 279 71.0
FAN08G1593 Fragaria x ananassa HOM05D004296 ORTHO05D005045 4.9e-101 371.7 279 82.4
FvH4_5g02380 Fragaria vesca HOM05D004296 ORTHO05D005045 6.4e-101 371.3 279 74.6
Cfa013198 Carpinus fangiana HOM05D004296 ORTHO05D005045 7.9e-59 231.5 280 47.9
QL12p012797 Quercus lobata HOM05D004296 ORTHO05D005045 1.4e-58 230.7 278 47.5
Haze_22818 Corylus avellana HOM05D004296 ORTHO05D005045 4.4e-57 225.7 279 47.0
MD07G1059600 Malus domestica HOM05D004296 ORTHO05D005045 2.4e-55 219.9 291 55.3
Prupe.5G099900 Prunus persica HOM05D004296 ORTHO05D005045 3.1e-55 219.5 368 39.4
Nn1g01503 Nelumbo nucifera HOM05D004296 ORTHO05D005045 2.9e-53 213.0 287 44.6
TAR268G0002 Trochodendron aralioides HOM05D004296 ORTHO05D005045 2.9e-53 213.0 282 44.3
MD14G1104200 Malus domestica HOM05D004296 ORTHO05D005045 3.8e-53 212.6 283 60.8
Manes.01G061800 Manihot esculenta HOM05D004296 ORTHO05D005045 5.0e-53 212.2 281 47.3
Dinv38945 Davidia involucrata HOM05D004296 ORTHO05D005045 1.4e-52 210.7 277 43.3
TAR375G1065 Trochodendron aralioides HOM05D004296 ORTHO05D005045 5.5e-52 208.8 282 44.3
CSS0030285 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 1.6e-51 207.2 280 44.6
Eucgr.D01846 Eucalyptus grandis HOM05D004296 ORTHO05D005045 2.1e-51 206.8 278 46.0
Hma1.2p1_0896F.1_g234000 Hydrangea macrophylla HOM05D004296 ORTHO05D005045 2.7e-51 206.5 274 43.4
CiPaw.08G074700 Carya illinoinensis HOM05D004296 ORTHO05D005045 6.1e-51 205.3 288 46.2
CSS0003782 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 3.0e-50 203.0 280 44.6
Rhsim02G0231000 Rhododendron simsii HOM05D004296 ORTHO05D005045 5.2e-50 202.2 280 44.3
Thecc.03G278500 Theobroma cacao HOM05D004296 ORTHO05D005045 5.2e-50 202.2 281 45.6
TWI36G1592 Tripterygium wilfordii HOM05D004296 ORTHO05D005045 3.3e-49 199.5 279 41.6
Duzib068G1191 Durio zibethinus HOM05D004296 ORTHO05D005045 4.4e-49 199.1 280 45.0
FAN13G2230 Fragaria x ananassa HOM05D004296 ORTHO05D005045 1.7e-48 197.2 116 83.6
Atru.chr9.2192 Acer truncatum HOM05D004296 ORTHO05D005045 3.7e-48 196.1 272 45.6
TWI18G1338 Tripterygium wilfordii HOM05D004296 ORTHO05D005045 1.2e-46 191.0 279 40.1
Cpa.g.sc45.44 Carica papaya HOM05D004296 ORTHO05D005045 2.2e-45 186.8 277 43.7
Glyma.20G061500 Glycine max HOM05D004296 ORTHO05D005045 2.9e-45 186.4 280 40.4
Sc01g0009550 Simmondsia chinensis HOM05D004296 ORTHO05D005045 5.0e-45 185.7 275 43.3
Glyma.01G220000 Glycine max HOM05D004296 ORTHO05D005045 6.5e-45 185.3 279 40.5
SalBow1G8718 Salvia bowleyana HOM05D004296 ORTHO05D005045 6.5e-45 185.3 278 40.6
Ciclev10002111m.g Citrus clementina HOM05D004296 ORTHO05D005045 8.5e-45 184.9 272 50.4
Cc10_g03910 Coffea canephora HOM05D004296 ORTHO05D005045 3.2e-44 183.0 253 43.1
COL.COLO4_34461 Corchorus olitorius HOM05D001502 ORTHO05D002950 4.2e-44 182.6 263 43.7
DCAR_000614 Daucus carota HOM05D004296 ORTHO05D005045 4.2e-44 182.6 279 39.8
MSTRG.11985 Avicennia marina HOM05D004296 ORTHO05D005045 7.2e-44 181.8 278 41.0
MSTRG.11987 Avicennia marina HOM05D004296 ORTHO05D005045 1.2e-43 181.0 278 40.6
CSS0037206 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 1.6e-43 180.6 265 46.4
Actinidia02008 Actinidia chinensis HOM05D004296 ORTHO05D005045 2.1e-43 180.3 274 44.5
Phvul.005G126900 Phaseolus vulgaris HOM05D004296 ORTHO05D005045 2.7e-43 179.9 273 38.8
Phvul.002G157700 Phaseolus vulgaris HOM05D004296 ORTHO05D005045 6.1e-43 178.7 281 40.9
Medtr0768s0010 Medicago truncatula HOM05D004296 ORTHO05D005045 8.0e-43 178.3 273 40.7
Migut.A00767 Erythranthe guttata HOM05D004296 ORTHO05D005045 1.0e-42 177.9 277 38.6
MBI18_g42175_MAGBIO Magnolia biondii HOM05D004296 ORTHO05D005045 1.4e-42 177.6 275 40.7
TPR.G3981 Trifolium pratense HOM05D004296 ORTHO05D005045 1.8e-42 177.2 273 40.7
SGA_v2.0_scaffold96G28938 Striga asiatica HOM05D004296 ORTHO05D005045 2.3e-42 176.8 275 39.3
ClCG07G008080 Citrullus lanatus HOM05D004296 ORTHO05D005045 3.0e-42 176.4 288 41.0
VMungo1080G1277 Vigna mungo HOM05D004296 ORTHO05D005045 5.2e-42 175.6 270 38.5
QL05p087372 Quercus lobata HOM05D004296 ORTHO05D005045 6.8e-42 175.3 282 42.9
Medtr6g011320 Medicago truncatula HOM05D004296 ORTHO05D005045 2.0e-41 173.7 272 39.7
MELO3C016352.2 Cucumis melo HOM05D004296 ORTHO05D005045 2.6e-41 173.3 325 37.5
CsaV3_4G005960 Cucumis sativus L. HOM05D004296 ORTHO05D005045 1.7e-40 170.6 324 38.0
Lalb_Chr20g0109121 Lupinus albus HOM05D004296 ORTHO05D005045 4.8e-40 169.1 274 37.6
PGR031G2604 Punica granatum HOM05D004296 ORTHO05D005045 4.8e-40 169.1 211 48.3
LjContig00312_ERROPOS870357g0005117 Lotus japonicus HOM05D004296 ORTHO05D005045 6.3e-40 168.7 286 38.8
Oeu009155.1 Olea europaea HOM05D004296 ORTHO05D005045 6.3e-40 168.7 292 37.7
Gohir.D05G298900 Gossypium hirsutum HOM05D004296 ORTHO05D005045 1.1e-39 167.9 264 40.2
Gorai.009G316100 Gossypium raimondii HOM05D004296 ORTHO05D005045 1.8e-39 167.2 264 40.2
HanXRQChr03g0086721 Helianthus annuus HOM05D004296 ORTHO05D005045 1.8e-39 167.2 291 38.5
Gohir.A05G299133 Gossypium hirsutum HOM05D004296 ORTHO05D005045 2.4e-39 166.8 264 40.2
AUR62007249 Chenopodium quinoa HOM05D004296 ORTHO05D005045 5.3e-39 165.6 318 37.7
Lj2A555T5 Lonicera japonica HOM05D004296 ORTHO05D005045 5.3e-39 165.6 208 45.7
Hund05589 Selenicereus undatus HOM05D004296 ORTHO05D005045 9.1e-39 164.9 274 39.8
Ah.12g054620 Amaranthus hybridus HOM05D004296 ORTHO05D005045 1.2e-38 164.5 301 38.5
HanXRQChr03g0086731 Helianthus annuus HOM05D004296 ORTHO05D005045 1.2e-38 164.5 293 37.9
Aqoxy3G03757 Aquilegia oxysepala HOM05D004296 ORTHO05D005045 2.7e-38 163.3 283 37.8
FvH4_4g24221 Fragaria vesca HOM05D004296 ORTHO05D005045 2.7e-38 163.3 153 65.4
PSO782G5383 Papaver somniferum HOM05D004296 ORTHO05D005045 3.5e-38 162.9 302 38.1
Peaxi162Scf00119g00828 Petunia axillaris HOM05D004296 ORTHO05D005045 3.5e-38 162.9 317 36.0
Psat7g254600 Pisum sativum HOM05D004296 ORTHO05D005045 5.9e-38 162.2 133 56.4
Potri.003G127200 Populus trichocarpa HOM05D004296 ORTHO05D005045 1.3e-37 161.0 164 51.2
SalBow7G4152 Salvia bowleyana HOM05D004296 ORTHO05D005045 1.3e-37 161.0 212 42.9
FAN18G3255 Fragaria x ananassa HOM05D004296 ORTHO05D005045 3.8e-37 159.5 85 88.2
Hund17074 Selenicereus undatus HOM05D004296 ORTHO05D005045 5.0e-37 159.1 262 39.3
Cpa.g.sc39.99 Carica papaya HOM05D004296 ORTHO05D005045 1.1e-36 157.9 133 57.9
Lsat_1_v5_gn_5_92680 Lactuca sativa HOM05D004296 ORTHO05D005045 1.1e-36 157.9 269 35.3
EL10Ac8g19045 Beta vulgaris HOM05D004296 ORTHO05D005045 1.5e-36 157.5 280 40.0
Psat1g061240 Pisum sativum HOM05D004296 ORTHO05D005045 1.9e-36 157.1 134 53.7
Lsat_1_v5_gn_6_87401 Lactuca sativa HOM05D004296 ORTHO05D005045 2.5e-36 156.8 269 36.1
Lj8C228T3 Lonicera japonica HOM05D004296 ORTHO05D005045 2.5e-36 156.8 337 33.8
PSO478G0046 Papaver somniferum HOM05D004296 ORTHO05D005045 2.5e-36 156.8 303 37.3
Peaxi162Scf00014g00082 Petunia axillaris HOM05D004296 ORTHO05D005045 7.2e-36 155.2 294 37.1
arahy.Tifrunner.gnm1.ann1.SKNY54 Arachis hypogaea HOM05D004296 ORTHO05D005045 6.1e-35 152.1 272 36.0
CSS0027171 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 1.0e-34 151.4 137 56.9
Sopen04g002480 Solanum pennellii HOM05D004296 ORTHO05D005045 1.0e-34 151.4 151 51.0
arahy.Tifrunner.gnm1.ann1.KQ253K Arachis hypogaea HOM05D004296 ORTHO05D005045 3.0e-34 149.8 272 37.1
Solyc04g007420.4 Solanum lycopersicum HOM05D004296 ORTHO05D005045 4.0e-34 149.4 151 50.3
C04p48320 Brassica napus HOM05D004296 ORTHO05D005045 6.8e-34 148.7 279 37.3
Nitab4.5_0001615g0200 Nicotiana tabacum HOM05D004296 ORTHO05D005045 6.8e-34 148.7 323 35.3
CSS0028138 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 1.2e-33 147.9 137 55.5
Nitab4.5_0011683g0020 Nicotiana tabacum HOM05D004296 ORTHO05D005045 1.2e-33 147.9 320 34.4
THA.LOC104809392 Tarenaya hassleriana HOM05D004296 ORTHO05D005045 1.2e-33 147.9 275 38.5
CAN.G774.35 Capsicum annuum HOM05D004296 ORTHO05D005045 1.5e-33 147.5 307 34.9
Sp7g00660 Schrenkiella parvula HOM05D004296 ORTHO05D005045 1.5e-33 147.5 279 38.7
SpUn0010_0140 Schrenkiella parvula HOM05D004296 ORTHO05D005045 1.5e-33 147.5 279 38.7
TPR.G4254 Trifolium pratense HOM05D004296 ORTHO05D005045 2.6e-33 146.7 256 36.7
Carub.0007s3425 Capsella rubella HOM05D004296 ORTHO05D005045 3.4e-33 146.4 285 35.8
PGSC0003DMG401005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 3.4e-33 146.4 139 51.8
ECA240G3612 Erigeron canadensis HOM05D004296 ORTHO05D005045 7.5e-33 145.2 113 55.8
Sopen08g029360 Solanum pennellii HOM05D004296 ORTHO05D005045 9.8e-33 144.8 132 51.5
Lj8A231T11 Lonicera japonica HOM05D004296 ORTHO05D005045 1.3e-32 144.4 361 31.9
PSO210G3801 Papaver somniferum HOM05D004296 ORTHO05D005045 1.7e-32 144.1 154 46.8
PGSC0003DMG400012342 Solanum tuberosum HOM05D004296 ORTHO05D005045 1.7e-32 144.1 322 32.6
PGSC0003DMG403005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 1.7e-32 144.1 349 32.1
BcaC02g08973 Brassica carinata HOM05D004296 ORTHO05D005045 3.7e-32 142.9 280 36.1
BolC4t26425H Brassica oleracea HOM05D004296 ORTHO05D005045 3.7e-32 142.9 280 36.1
Oeu020615.1 Olea europaea HOM05D004296 ORTHO05D005045 3.7e-32 142.9 312 35.9
BcaB06g27609 Brassica carinata HOM05D004296 ORTHO05D005045 4.8e-32 142.5 132 55.3
A04p14410 Brassica napus HOM05D004296 ORTHO05D005045 8.3e-32 141.7 131 54.2
BraA04t17088Z Brassica rapa HOM05D004296 ORTHO05D005045 8.3e-32 141.7 131 54.2
arahy.Tifrunner.gnm1.ann1.CEX2YD Arachis hypogaea HOM05D004296 ORTHO05D005045 2.4e-31 140.2 130 49.2
Sed0022715 Sechium edule HOM05D004296 ORTHO05D005045 4.1e-31 139.4 353 32.9
Actinidia14560 Actinidia chinensis HOM05D004296 ORTHO05D005045 9.1e-31 138.3 274 35.4
AL7G48180 Arabidopsis lyrata HOM05D004296 ORTHO05D005045 1.6e-30 137.5 253 36.4
CARHR213060 Cardamine hirsuta HOM05D004296 ORTHO05D005045 2.0e-30 137.1 281 35.2
HPP92_021782 Vanilla planifolia HOM05D004296 ORTHO05D005045 2.7e-30 136.7 268 34.7
unitig_32.g11599 Utricularia gibba HOM05D004296 ORTHO05D005045 4.5e-30 136.0 271 35.4
Lalb_Chr09g0320981 Lupinus albus HOM05D004296 ORTHO05D005045 7.7e-30 135.2 142 45.8
Solyc08g081040.3 Solanum lycopersicum HOM05D004296 ORTHO05D005045 7.7e-30 135.2 349 30.7
Thhalv10028247m.g Eutrema salsugineum HOM05D004296 ORTHO05D005045 1.3e-29 134.4 277 34.3
Aqoxy3G00118 Aquilegia oxysepala HOM05D004296 ORTHO05D005045 1.7e-29 134.0 269 34.6
Aa31LG9G640 Aethionema arabicum HOM05D004296 ORTHO05D005045 5.0e-29 132.5 193 41.5
SHI24854 Sapria himalayana HOM05D004296 ORTHO05D005045 8.6e-29 131.7 157 44.6
AT5G41270 Arabidopsis thaliana HOM05D004296 ORTHO05D005045 2.5e-28 130.2 282 32.3
Rhsim02G0230400 Rhododendron simsii HOM05D004296 ORTHO05D005045 3.3e-28 129.8 272 34.2
CDE01G0178 Ceratophyllum demersum HOM05D004296 ORTHO05D005045 5.5e-28 129.0 273 33.3
Carub.0001s0729 Capsella rubella HOM05D004296 ORTHO05D005045 2.1e-27 127.1 166 41.0
AUR62018749 Chenopodium quinoa HOM05D004296 ORTHO05D005045 2.1e-27 127.1 323 33.1
Psat0s5346g0040 Pisum sativum HOM05D002378 ORTHO05D002936 6.1e-27 125.6 223 38.6
CDE04G2006 Ceratophyllum demersum HOM05D004296 ORTHO05D005045 8.0e-27 125.2 132 48.5
arahy.Tifrunner.gnm1.ann1.W3QJXS Arachis hypogaea HOM05D004296 ORTHO05D005045 1.0e-26 124.8 254 37.0
Os01g0541600 Oryza sativa ssp. japonica HOM05D004296 ORTHO05D005045 2.0e-25 120.6 113 48.7
Rhsim02G0230900 Rhododendron simsii HOM05D004296 ORTHO05D005045 9.8e-25 118.2 158 45.6
Haze_21601 Corylus avellana HOM05D004296 ORTHO05D005045 2.8e-24 116.7 220 36.4
CAN.G1069.19 Capsicum annuum HOM05D004296 ORTHO05D005045 3.7e-24 116.3 118 52.5
Sed0002821 Sechium edule HOM05D004296 ORTHO05D005045 2.4e-23 113.6 278 32.4
PSO210G3847 Papaver somniferum HOM05D004296 ORTHO05D005045 3.2e-23 113.2 266 33.1
Thhalv10027895m.g Eutrema salsugineum HOM05D004296 ORTHO05D005045 3.5e-22 109.8 285 30.2
Zm00001eb162950 Zea mays HOM05D004296 ORTHO05D005045 5.9e-22 109.0 317 26.2
SEGI_21744 Sequoiadendron giganteum HOM05D004296 ORTHO05D005045 7.8e-22 108.6 260 30.8
ATR0680G148 Amborella trichopoda HOM05D004296 ORTHO05D005045 1.0e-21 108.2 270 30.4
Sabra01G0078900 Salix brachista HOM05D004296 ORTHO05D005045 1.0e-21 108.2 122 52.5
Mapoly0057s0058 Marchantia polymorpha HOM05D004296 ORTHO05D005045 5.2e-18 95.9 149 36.9
Os01g0531000 Oryza sativa ssp. japonica HOM05D004296 ORTHO05D005045 1.6e-14 84.3 94 43.6
Nitab4.5_0003441g0080 Nicotiana tabacum HOM05D004296 ORTHO05D005045 7.8e-14 82.0 83 49.4
Oeu009158.1 Olea europaea HOM05D004296 ORTHO05D005045 1.7e-13 80.9 120 40.8
ATR0680G137 Amborella trichopoda HOM05D004296 ORTHO05D005045 2.8e-11 73.6 57 59.6
Pp3c22_14200 Physcomitrium patens HOM05D004296 ORTHO05D005045 8.0e-11 72.0 147 33.3
PGSC0003DMG402005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 5.2e-10 69.3 58 53.4
Cfa014102 Carpinus fangiana HOM05D004296 ORTHO05D005045 3.7e-08 63.2 54 50.0
Mapoly0057s0052 Marchantia polymorpha HOM05D004296 ORTHO05D005045 4.9e-08 62.8 88 35.2
AagrBONN_evm.TU.Sc2ySwM_228.2126 Anthoceros agrestis HOM05D004296 ORTHO05D005045 1.1e-07 61.6 138 32.6
arahy.Tifrunner.gnm1.ann1.BHE6V7 Arachis hypogaea HOM05D004296 ORTHO05D005045 1.4e-07 61.2 285 26.7


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