Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G1072 Fragaria x ananassa HOM05D007925 ORTHO05D009727 1.0e-94 350.1 186 100.0
FvH4_4g20280 Fragaria vesca HOM05D007925 ORTHO05D009727 3.1e-83 312.0 216 82.4
FvH4_4g20350 Fragaria vesca HOM05D007925 ORTHO05D009727 3.2e-72 275.4 209 77.0
RcHm_v2.0_Chr4g0425771 Rosa chinensis HOM05D007925 ORTHO05D009727 2.3e-62 242.7 225 64.9
FAN07G0172 Fragaria x ananassa HOM05D007925 ORTHO05D009727 3.3e-61 238.8 143 90.9
FvH4_4g20060 Fragaria vesca HOM05D007925 ORTHO05D009727 1.0e-46 190.7 164 70.7
Prupe.1G115200 Prunus persica HOM05D007925 ORTHO05D009727 5.7e-37 158.3 213 52.1
MD16G1151500 Malus domestica HOM05D007925 ORTHO05D009727 5.5e-32 141.7 148 57.4
MD13G1151000 Malus domestica HOM05D007925 ORTHO05D009727 8.6e-25 117.9 151 48.3
CiPaw.02G073300 Carya illinoinensis HOM05D007925 ORTHO05D009727 1.5e-24 117.1 221 40.3
Actinidia18460 Actinidia chinensis HOM05D007925 ORTHO05D009727 4.7e-23 112.1 198 38.9
Haze_01318 Corylus avellana HOM05D007925 ORTHO05D009727 4.7e-23 112.1 203 41.9
Dinv44272 Davidia involucrata HOM05D007925 ORTHO05D009727 4.7e-23 112.1 205 41.0
QL12p029416 Quercus lobata HOM05D007925 ORTHO05D009727 2.6e-21 106.3 142 44.4
Ciclev10005876m.g Citrus clementina HOM05D007925 ORTHO05D009727 2.2e-20 103.2 220 38.6
Haze_01320 Corylus avellana HOM05D007925 ORTHO05D009727 8.3e-20 101.3 146 45.9
Atru.chr4.3043 Acer truncatum HOM05D007925 ORTHO05D009727 3.1e-19 99.4 224 35.3
Sed0014435 Sechium edule HOM05D007925 ORTHO05D009727 2.7e-18 96.3 215 36.7
Cfa015292 Carpinus fangiana HOM05D007925 ORTHO05D009727 2.9e-17 92.8 223 36.3
ClCG06G004510 Citrullus lanatus HOM05D007925 ORTHO05D009727 2.9e-17 92.8 215 34.0
CsaV3_6G028540 Cucumis sativus L. HOM05D007925 ORTHO05D009727 1.1e-16 90.9 215 34.4
TWI09G1395 Tripterygium wilfordii HOM05D007925 ORTHO05D009727 4.3e-16 89.0 208 36.5
Sabra12G0074900 Salix brachista HOM05D007925 ORTHO05D009727 7.3e-16 88.2 193 36.8
TWI53G0957 Tripterygium wilfordii HOM05D007925 ORTHO05D009727 2.8e-15 86.3 207 33.3
TAR633G0906 Trochodendron aralioides HOM05D007925 ORTHO05D009727 1.0e-14 84.3 146 40.4
Gohir.A02G055200 Gossypium hirsutum HOM05D007925 ORTHO05D009727 1.4e-14 84.0 228 31.1
Rhsim04G0240400 Rhododendron simsii HOM05D007925 ORTHO05D009727 1.4e-14 84.0 224 32.6
Gorai.005G067800 Gossypium raimondii HOM05D007925 ORTHO05D009727 3.1e-14 82.8 228 30.3
Nn4g25550 Nelumbo nucifera HOM05D007925 ORTHO05D009727 4.0e-14 82.4 195 35.4
Gohir.D02G060200 Gossypium hirsutum HOM05D007925 ORTHO05D009727 1.5e-13 80.5 228 29.8
Potri.012G102300 Populus trichocarpa HOM05D007925 ORTHO05D009727 4.4e-13 79.0 147 38.1
Sc13g0006560 Simmondsia chinensis HOM05D007925 ORTHO05D009727 4.4e-13 79.0 157 39.5
Thecc.04G303500 Theobroma cacao HOM05D007925 ORTHO05D009727 4.4e-13 79.0 142 39.4
Glyma.09G034600 Glycine max HOM05D007925 ORTHO05D009727 2.9e-12 76.3 214 31.8
Manes.15G001100 Manihot esculenta HOM05D007925 ORTHO05D009727 8.3e-12 74.7 140 38.6
Nitab4.5_0007718g0010 Nicotiana tabacum HOM05D007925 ORTHO05D009727 1.9e-11 73.6 145 32.4
COL.COLO4_34592 Corchorus olitorius HOM05D007925 ORTHO05D009727 3.2e-11 72.8 152 34.9
Phvul.006G118800 Phaseolus vulgaris HOM05D007925 ORTHO05D009727 9.2e-11 71.2 213 29.6
Potri.008G103600 Populus trichocarpa HOM05D007925 ORTHO05D009727 9.2e-11 71.2 165 34.5
Peaxi162Scf00935g00005 Petunia axillaris HOM05D007925 ORTHO05D009727 1.6e-10 70.5 147 34.7
AUR62039262 Chenopodium quinoa HOM05D007925 ORTHO05D009727 2.7e-10 69.7 133 36.8
Oeu063653.1 Olea europaea HOM05D007925 ORTHO05D009727 2.7e-10 69.7 174 36.2
MELO3C021261.2 Cucumis melo HOM05D007925 ORTHO05D009727 6.0e-10 68.6 126 39.7
Solyc03g093980.2 Solanum lycopersicum HOM05D007925 ORTHO05D009727 1.0e-09 67.8 222 28.4
PGSC0003DMG400008341 Solanum tuberosum HOM05D007925 ORTHO05D009727 1.0e-09 67.8 172 32.0
Oeu042669.1 Olea europaea HOM05D007925 ORTHO05D009727 1.3e-09 67.4 208 34.1
VMungo0540G0187 Vigna mungo HOM05D007925 ORTHO05D009727 1.7e-09 67.0 218 29.8
Sopen03g024830 Solanum pennellii HOM05D007925 ORTHO05D009727 2.3e-09 66.6 222 27.9
Glyma.15G139300 Glycine max HOM05D007925 ORTHO05D009727 8.6e-09 64.7 212 30.2
Ah.13g071370 Amaranthus hybridus HOM05D007925 ORTHO05D009727 1.5e-08 63.9 137 34.3
Nitab4.5_0009429g0010 Nicotiana tabacum HOM05D007925 ORTHO05D009727 2.5e-08 63.2 229 28.4
CANSAT35G1711 Cannabis sativa HOM05D007925 ORTHO05D009727 7.3e-08 61.6 146 39.7
Eucgr.H04059 Eucalyptus grandis HOM05D007925 ORTHO05D009727 7.3e-08 61.6 142 35.9
MBI18_g22338_MAGBIO Magnolia biondii HOM05D020265 ORTHO05D009727 7.3e-08 61.6 146 34.2
arahy.Tifrunner.gnm1.ann1.BW1DTW Arachis hypogaea HOM05D007925 ORTHO05D009727 3.6e-07 59.3 132 31.1
arahy.Tifrunner.gnm1.ann1.8N1160 Arachis hypogaea HOM05D007925 ORTHO05D009727 4.7e-07 58.9 132 31.1
ECA233G1514 Erigeron canadensis HOM05D007925 ORTHO05D009727 3.1e-06 56.2 97 40.2
ECA234G4268 Erigeron canadensis HOM05D007925 ORTHO05D009727 4.0e-06 55.8 89 39.3
Lsat_1_v5_gn_6_39741 Lactuca sativa HOM05D007925 ORTHO05D009727 4.0e-06 55.8 144 33.3
Manes.03G206101 Manihot esculenta HOM05D007925 ORTHO05D009727 4.0e-06 55.8 98 38.8
SalBow8G2554 Salvia bowleyana HOM05D007925 ORTHO05D009727 8.9e-06 54.7 174 32.2


User provided reference genes

Program Settings