Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G0928 Fragaria x ananassa HOM05D007426 ORTHO05D009167 1.7e-113 414.5 215 100.0
FAN12G1804 Fragaria x ananassa HOM05D007426 ORTHO05D009167 1.1e-109 401.7 216 98.6
RcHm_v2.0_Chr4g0434041 Rosa chinensis HOM05D007426 ORTHO05D009167 4.8e-68 263.5 213 65.3
MD13G1032800 Malus domestica HOM05D007426 ORTHO05D009167 2.0e-53 214.9 235 53.6
FvH4_4g26410 Fragaria vesca HOM05D007426 ORTHO05D009167 2.7e-50 204.5 109 96.3
MD16G1034800 Malus domestica HOM05D007426 ORTHO05D009167 3.5e-50 204.1 238 51.7
Manes.06G063200 Manihot esculenta HOM05D007426 ORTHO05D009167 3.0e-46 191.0 230 46.5
GSVIVG01011807001 Vitis vinifera HOM05D000798 ORTHO05D000659 6.8e-46 189.9 213 52.6
MELO3C012287.2 Cucumis melo HOM05D007426 ORTHO05D009167 5.7e-45 186.8 225 47.6
QL01p003061 Quercus lobata HOM05D007426 ORTHO05D009167 9.8e-45 186.0 230 48.3
Ciclev10017504m.g Citrus clementina HOM05D007426 ORTHO05D009167 1.7e-44 185.3 238 45.8
Gohir.A03G149700 Gossypium hirsutum HOM05D007426 ORTHO05D009167 6.3e-44 183.3 183 52.5
Gohir.D02G172600 Gossypium hirsutum HOM05D007426 ORTHO05D009167 1.1e-43 182.6 242 47.1
Gorai.005G194300 Gossypium raimondii HOM05D007426 ORTHO05D009167 4.1e-43 180.6 241 46.9
CiPaw.05G245100 Carya illinoinensis HOM05D007426 ORTHO05D009167 9.1e-43 179.5 214 49.5
COL.COLO4_35570 Corchorus olitorius HOM05D002230 ORTHO05D002441 9.1e-43 179.5 196 47.4
Haze_00680 Corylus avellana HOM05D007426 ORTHO05D009167 9.1e-43 179.5 212 50.5
CsaV3_5G034750 Cucumis sativus L. HOM05D007426 ORTHO05D009167 1.6e-42 178.7 223 46.6
Atru.chr11.331 Acer truncatum HOM05D007426 ORTHO05D009167 2.0e-42 178.3 194 48.5
CSS0006507 Camellia sinensis var. sinensis HOM05D007426 ORTHO05D009167 7.7e-42 176.4 240 42.9
TAR629G2850 Trochodendron aralioides HOM05D007426 ORTHO05D009167 1.0e-41 176.0 229 46.7
ClCG04G001050 Citrullus lanatus HOM05D007426 ORTHO05D009167 1.7e-41 175.3 216 48.1
Dinv04907 Davidia involucrata HOM05D007426 ORTHO05D009167 2.9e-41 174.5 179 50.3
FAN17G2923 Fragaria x ananassa HOM05D007426 ORTHO05D009167 2.5e-40 171.4 98 91.8
Nn3g17999 Nelumbo nucifera HOM05D007426 ORTHO05D009167 2.8e-39 167.9 232 44.0
CANSAT01G1275 Cannabis sativa HOM05D007426 ORTHO05D009167 8.0e-39 166.4 221 45.7
Sed0007337 Sechium edule HOM05D007426 ORTHO05D009167 3.0e-38 164.5 214 47.7
THA.LOC104821759 Tarenaya hassleriana HOM05D007426 ORTHO05D009167 3.0e-38 164.5 224 43.8
Duzib248G0356 Durio zibethinus HOM05D007426 ORTHO05D009167 1.5e-37 162.2 214 45.8
Eucgr.G00774 Eucalyptus grandis HOM05D007426 ORTHO05D009167 2.6e-37 161.4 189 47.6
Lj3A877T95 Lonicera japonica HOM05D007426 ORTHO05D009167 3.4e-37 161.0 251 40.6
PGR119G0474 Punica granatum HOM05D007426 ORTHO05D009167 3.4e-37 161.0 227 45.4
Cpa.g.sc65.89 Carica papaya HOM05D007426 ORTHO05D009167 1.7e-36 158.7 219 42.5
Aa31LG7G6970 Aethionema arabicum HOM05D007426 ORTHO05D009167 1.8e-35 155.2 215 42.8
Cc11_g09290 Coffea canephora HOM05D007426 ORTHO05D009167 4.1e-35 154.1 148 50.0
Sc11g0003960 Simmondsia chinensis HOM05D007426 ORTHO05D009167 9.2e-35 152.9 210 44.3
Aqoxy3G03989 Aquilegia oxysepala HOM05D007426 ORTHO05D009167 1.2e-34 152.5 228 39.9
TWI79G0655 Tripterygium wilfordii HOM05D007426 ORTHO05D009167 1.6e-34 152.1 207 44.4
Ca_12586_v3 Cicer arietinum L. HOM05D007426 ORTHO05D009167 3.5e-34 151.0 200 46.5
FAN07G1506 Fragaria x ananassa HOM05D007426 ORTHO05D009167 1.7e-33 148.7 84 89.3
arahy.Tifrunner.gnm1.ann1.A3A4LS Arachis hypogaea HOM05D007426 ORTHO05D009167 2.9e-33 147.9 217 42.4
MSTRG.13563 Avicennia marina HOM05D007426 ORTHO05D009167 8.6e-33 146.4 179 41.3
Lalb_Chr10g0096341 Lupinus albus HOM05D007426 ORTHO05D009167 8.6e-33 146.4 218 45.0
Rhsim09G0137400 Rhododendron simsii HOM05D007426 ORTHO05D009167 4.3e-32 144.1 241 38.6
Hma1.2p1_0882F.1_g232200 Hydrangea macrophylla HOM05D007426 ORTHO05D009167 1.2e-31 142.5 221 39.8
Nitab4.5_0000350g0090 Nicotiana tabacum HOM05D007426 ORTHO05D009167 1.6e-31 142.1 192 41.1
Nitab4.5_0003886g0020 Nicotiana tabacum HOM05D007426 ORTHO05D009167 2.1e-31 141.7 187 41.7
BolC5t30917H Brassica oleracea HOM05D007426 ORTHO05D009167 4.7e-31 140.6 222 38.7
Thhalv10006897m.g Eutrema salsugineum HOM05D007426 ORTHO05D009167 4.7e-31 140.6 236 39.0
Solyc05g008560.1 Solanum lycopersicum HOM05D007426 ORTHO05D009167 4.7e-31 140.6 155 45.8
Sopen05g004400 Solanum pennellii HOM05D007426 ORTHO05D009167 4.7e-31 140.6 155 45.8
C05p22170 Brassica napus HOM05D007426 ORTHO05D009167 6.1e-31 140.2 224 38.4
BcaC05g26208 Brassica carinata HOM05D007426 ORTHO05D009167 8.0e-31 139.8 224 38.4
Lsat_1_v5_gn_4_15701 Lactuca sativa HOM05D007426 ORTHO05D009167 1.4e-30 139.0 243 38.3
Medtr1g031720 Medicago truncatula HOM05D007426 ORTHO05D009167 1.4e-30 139.0 185 41.6
arahy.Tifrunner.gnm1.ann1.5H8JFW Arachis hypogaea HOM05D003289 ORTHO05D009167 4.0e-30 137.5 210 41.4
CDE04G0172 Ceratophyllum demersum HOM05D007426 ORTHO05D009167 4.0e-30 137.5 211 39.3
DCAR_023623 Daucus carota HOM05D007426 ORTHO05D009167 6.8e-30 136.7 149 45.6
Lj2g0001206 Lotus japonicus HOM05D007426 ORTHO05D009167 1.2e-29 136.0 182 44.0
PGSC0003DMG402030517 Solanum tuberosum HOM05D007426 ORTHO05D009167 1.5e-29 135.6 187 40.1
vmacro10360 Vaccinium macrocarpon HOM05D007426 ORTHO05D009167 2.0e-29 135.2 226 38.5
Sp1g20420 Schrenkiella parvula HOM05D007426 ORTHO05D009167 2.6e-29 134.8 217 40.6
Actinidia34749 Actinidia chinensis HOM05D007426 ORTHO05D009167 9.8e-29 132.9 211 40.3
Glyma.14G156100 Glycine max HOM05D007426 ORTHO05D009167 1.3e-28 132.5 196 39.3
Psat6g044600 Pisum sativum HOM05D007426 ORTHO05D009167 1.7e-28 132.1 177 42.9
SGA_v2.0_scaffold376G50296 Striga asiatica HOM05D007426 ORTHO05D009167 2.2e-28 131.7 212 36.8
CARHR023340 Cardamine hirsuta HOM05D007426 ORTHO05D009167 3.7e-28 131.0 190 42.6
SalBow8G0581 Salvia bowleyana HOM05D007426 ORTHO05D009167 3.7e-28 131.0 201 40.8
Glyma.13G034900 Glycine max HOM05D007426 ORTHO05D009167 4.9e-28 130.6 196 40.3
CAN.G1489.16 Capsicum annuum HOM05D007426 ORTHO05D009167 3.2e-27 127.9 153 45.8
BraA09t39664Z Brassica rapa HOM05D007426 ORTHO05D009167 2.7e-26 124.8 202 36.6
AL1G36520 Arabidopsis lyrata HOM05D007426 ORTHO05D009167 6.0e-26 123.6 216 40.7
Carub.0001s2246 Capsella rubella HOM05D007426 ORTHO05D009167 6.0e-26 123.6 231 36.8
MBI02_g38361_MAGBIO Magnolia biondii HOM05D007426 ORTHO05D009167 7.8e-26 123.2 186 40.3
A01p19900 Brassica napus HOM05D007426 ORTHO05D009167 1.0e-25 122.9 199 37.2
HPP92_023011 Vanilla planifolia HOM05D007426 ORTHO05D009167 1.3e-25 122.5 183 38.3
VMungo1215G1392 Vigna mungo HOM05D007426 ORTHO05D009167 1.3e-25 122.5 158 43.0
BcaB07g32294 Brassica carinata HOM05D007426 ORTHO05D009167 3.9e-25 120.9 184 38.6
A09p41750 Brassica napus HOM05D007426 ORTHO05D009167 3.9e-25 120.9 197 37.1
Phvul.003G029100 Phaseolus vulgaris HOM05D007426 ORTHO05D009167 1.9e-24 118.6 156 42.3
AT1G22960 Arabidopsis thaliana HOM05D007426 ORTHO05D009167 2.5e-24 118.2 219 39.7
ECA234G2171 Erigeron canadensis HOM05D007426 ORTHO05D009167 4.7e-23 114.0 154 38.3
Migut.E00390 Erythranthe guttata HOM05D007426 ORTHO05D009167 1.3e-20 105.9 198 32.3
CSS0028756 Camellia sinensis var. sinensis HOM05D007426 ORTHO05D009167 4.1e-19 100.9 94 55.3
ATR0579G149 Amborella trichopoda HOM05D007426 ORTHO05D009167 6.0e-18 97.1 140 38.6
Oeu048376.1 Olea europaea HOM05D007426 ORTHO05D009167 1.0e-17 96.3 161 35.4
Cfa015816 Carpinus fangiana HOM05D007426 ORTHO05D009167 1.8e-14 85.5 76 57.9
TPR.G36966 Trifolium pratense HOM05D007426 ORTHO05D009167 8.3e-12 76.6 148 37.8
CDE07G1153 Ceratophyllum demersum HOM05D007426 ORTHO05D009167 1.9e-08 65.5 74 44.6
BcaB03g11918 Brassica carinata HOM05D007426 ORTHO05D009167 2.5e-08 65.1 201 29.9
FAN22G2183 Fragaria x ananassa HOM05D007426 ORTHO05D009167 4.7e-07 60.8 31 93.5
Zm00001eb164150 Zea mays HOM05D025020 ORTHO05D009167 8.1e-07 60.1 155 32.3
FAN17G0018 Fragaria x ananassa HOM05D007426 ORTHO05D009167 4.0e-06 57.8 32 87.5
Zm00001eb406750 Zea mays HOM05D025020 ORTHO05D009167 8.9e-06 56.6 139 31.7


User provided reference genes

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