Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G0915 Fragaria x ananassa HOM05D006719 ORTHO05D007063 1.3e-35 153.3 136 100.0
FvH4_4g17930 Fragaria vesca HOM05D006719 ORTHO05D007063 1.8e-35 152.9 135 100.0
FAN12G0931 Fragaria x ananassa HOM05D006719 ORTHO05D007063 7.4e-34 147.5 135 96.3
FAN07G2874 Fragaria x ananassa HOM05D006719 ORTHO05D007063 5.3e-32 141.4 143 63.6
FAN17G0015 Fragaria x ananassa HOM05D006719 ORTHO05D007063 8.4e-30 134.0 143 58.7
RcHm_v2.0_Chr4g0422101 Rosa chinensis HOM05D006719 ORTHO05D007063 4.1e-24 115.2 133 84.2
Prupe.1G137900 Prunus persica HOM05D006719 ORTHO05D007063 2.9e-14 82.4 126 69.8
MD16G1170500 Malus domestica HOM05D006719 ORTHO05D007063 6.5e-14 81.3 131 73.3
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 2.5e-13 79.3 125 68.8
MD13G1169300 Malus domestica HOM05D006719 ORTHO05D007063 2.5e-13 79.3 131 67.2
CiPaw.02G083300 Carya illinoinensis HOM05D006719 ORTHO05D007063 1.6e-12 76.6 124 75.8
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 2.1e-12 76.3 127 65.4
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 2.1e-12 76.3 127 65.4
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 2.7e-12 75.9 132 69.7
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 1.0e-11 73.9 119 63.9
Cfa015380 Carpinus fangiana HOM05D006719 ORTHO05D007063 2.3e-11 72.8 124 39.5
Psat1g153440 Pisum sativum HOM05D006719 ORTHO05D007063 2.3e-11 72.8 112 76.8
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 3.0e-11 72.4 135 68.9
DCAR_030531 Daucus carota HOM05D006719 ORTHO05D007063 6.7e-11 71.2 129 55.8
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 2.0e-10 69.7 124 62.1
Lj6g0006694 Lotus japonicus HOM05D006719 ORTHO05D007063 2.6e-10 69.3 135 68.1
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 5.7e-10 68.2 122 67.2
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 9.7e-10 67.4 131 59.5
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 9.7e-10 67.4 131 65.6
vmacro08144 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 9.7e-10 67.4 122 66.4
vmacro22972 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 9.7e-10 67.4 122 66.4
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 1.3e-09 67.0 131 64.9
Actinidia40259 Actinidia chinensis HOM05D006719 ORTHO05D007063 1.7e-09 66.6 124 72.6
Ca_01942_v3 Cicer arietinum L. HOM05D006719 ORTHO05D007063 1.7e-09 66.6 110 75.5
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 1.7e-09 66.6 105 74.3
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 1.7e-09 66.6 124 70.2
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 1.7e-09 66.6 112 75.9
Manes.15G012900 Manihot esculenta HOM05D006719 ORTHO05D007063 2.8e-09 65.9 124 73.4
Oeu037752.1 Olea europaea HOM05D006719 ORTHO05D007063 2.8e-09 65.9 131 66.4
PSO170G6252 Papaver somniferum HOM05D006719 ORTHO05D007063 6.3e-09 64.7 131 65.6
GSVIVG01017752001 Vitis vinifera HOM05D006719 ORTHO05D007063 8.2e-09 64.3 131 70.2
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 1.4e-08 63.5 123 68.3
Duzib212G0625 Durio zibethinus HOM05D006719 ORTHO05D007063 1.8e-08 63.2 130 58.5
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 1.8e-08 63.2 123 66.7
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 1.8e-08 63.2 132 59.8
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 1.8e-08 63.2 123 66.7
Dinv29768 Davidia involucrata HOM05D001303 ORTHO05D001129 2.4e-08 62.8 107 69.2
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 3.1e-08 62.4 119 72.3
Atru.chr4.2828 Acer truncatum HOM05D006719 ORTHO05D007063 4.1e-08 62.0 99 77.8
Peaxi162Scf00024g00041 Petunia axillaris HOM05D006719 ORTHO05D007063 4.1e-08 62.0 123 68.3
MSTRG.21797 Avicennia marina HOM05D006719 ORTHO05D007063 5.3e-08 61.6 105 61.9
Gohir.D09G240400 Gossypium hirsutum HOM05D006719 ORTHO05D007063 5.3e-08 61.6 111 68.5
Peaxi162Scf00024g00231 Petunia axillaris HOM05D006719 ORTHO05D007063 5.3e-08 61.6 105 76.2
Gohir.A09G239500 Gossypium hirsutum HOM05D006719 ORTHO05D007063 7.0e-08 61.2 111 65.8
Carub.0007s2587 Capsella rubella HOM05D006719 ORTHO05D007063 9.1e-08 60.8 131 64.9
CiPaw.01G149100 Carya illinoinensis HOM05D006719 ORTHO05D007063 9.1e-08 60.8 117 40.2
Nn4g25876 Nelumbo nucifera HOM05D006719 ORTHO05D007063 1.5e-07 60.1 113 59.3
Duzib052G0445 Durio zibethinus HOM05D006719 ORTHO05D007063 2.6e-07 59.3 131 66.4
QL06p008791 Quercus lobata HOM05D006719 ORTHO05D007063 2.6e-07 59.3 120 70.0
TPR.G425 Trifolium pratense HOM05D006719 ORTHO05D007063 2.6e-07 59.3 120 69.2
Sopen01g028510 Solanum pennellii HOM05D006719 ORTHO05D007063 4.5e-07 58.5 136 63.2
Zm00001eb137600 Zea mays HOM05D006719 ORTHO05D007063 4.5e-07 58.5 126 50.0
Aa31LG10G6320 Aethionema arabicum HOM05D006719 ORTHO05D007063 5.9e-07 58.2 120 69.2
Cpa.g.sc16.165 Carica papaya HOM05D006719 ORTHO05D007063 5.9e-07 58.2 58 56.9
Peaxi162Scf00534g00017 Petunia axillaris HOM05D006719 ORTHO05D007063 5.9e-07 58.2 124 33.1
Lalb_Chr15g0083521 Lupinus albus HOM05D006719 ORTHO05D007063 7.7e-07 57.8 134 67.2
Solyc01g066900.4 Solanum lycopersicum HOM05D006719 ORTHO05D007063 7.7e-07 57.8 136 60.3
PSO210G7501 Papaver somniferum HOM05D006719 ORTHO05D007063 1.0e-06 57.4 131 64.1
BraA08t33189Z Brassica rapa HOM05D006719 ORTHO05D007063 1.3e-06 57.0 131 56.5
CANSAT78G1100 Cannabis sativa HOM05D006719 ORTHO05D007063 1.7e-06 56.6 56 60.7
Sed0000550 Sechium edule HOM05D006719 ORTHO05D007063 6.5e-06 54.7 99 77.8


User provided reference genes

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