Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.6e-274 948.7 468 100.0
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 3.2e-270 934.5 468 98.9
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 3.3e-259 897.9 467 95.3
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 5.5e-238 827.4 470 87.9
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 3.6e-189 665.2 491 73.9
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.2e-186 656.0 460 76.1
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 6.2e-181 637.9 481 69.4
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 7.1e-169 597.8 486 65.0
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 1.1e-166 590.5 490 63.9
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 1.5e-166 590.1 489 63.4
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 4.3e-166 588.6 483 63.1
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 4.8e-165 585.1 485 63.5
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 6.9e-164 581.3 478 64.9
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 9.0e-164 580.9 486 63.4
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 9.0e-164 580.9 478 63.2
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 4.9e-162 575.1 476 62.8
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 4.9e-162 575.1 479 62.2
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 1.4e-161 573.5 478 64.0
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.2e-160 570.5 485 62.5
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 1.5e-158 563.5 486 61.3
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 4.3e-158 562.0 450 63.1
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 8.1e-157 557.8 482 61.6
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 2.0e-155 553.1 475 59.2
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 2.6e-155 552.7 480 58.8
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 2.5e-153 546.2 496 58.3
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 9.3e-153 544.3 484 59.7
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 2.1e-152 543.1 483 60.2
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 2.1e-152 543.1 480 59.2
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 4.6e-152 542.0 506 57.7
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 4.3e-150 535.4 442 60.9
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 4.3e-150 535.4 491 57.2
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 4.3e-150 535.4 491 57.2
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.3e-149 533.9 469 60.1
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 6.2e-149 531.6 476 58.0
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 8.2e-149 531.2 471 58.8
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 1.1e-148 530.8 503 58.3
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 3.1e-148 529.3 483 59.2
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 5.8e-147 525.0 497 55.3
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 2.9e-146 522.7 456 58.3
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 2.9e-146 522.7 440 60.5
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 6.5e-146 521.5 486 55.3
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 2.5e-145 519.6 475 55.8
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 4.2e-145 518.8 492 57.5
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 4.2e-145 518.8 479 58.0
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 5.5e-145 518.5 387 66.4
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 9.3e-145 517.7 468 59.2
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 1.6e-144 516.9 494 55.3
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 4.6e-144 515.4 494 55.1
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 5.1e-143 511.9 495 54.3
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 5.7e-142 508.4 367 67.8
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 7.4e-142 508.1 418 60.8
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 9.7e-142 507.7 496 58.5
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 1.8e-140 503.4 485 56.5
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 2.4e-140 503.1 486 54.3
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 4.1e-140 502.3 494 54.3
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 6.9e-140 501.5 433 58.4
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 3.4e-139 499.2 485 54.2
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 2.2e-138 496.5 367 64.3
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 5.0e-138 495.4 434 58.3
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 1.4e-137 493.8 487 53.4
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 1.4e-137 493.8 468 57.5
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 7.2e-137 491.5 507 53.5
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 9.4e-137 491.1 468 55.6
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 2.7e-136 489.6 485 52.6
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 2.7e-136 489.6 443 56.9
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 4.6e-136 488.8 487 56.1
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 7.9e-136 488.0 487 56.3
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 1.0e-135 487.6 404 60.1
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.4e-135 487.3 464 56.5
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 1.4e-135 487.3 429 57.8
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 1.8e-135 486.9 390 62.1
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 1.8e-135 486.9 466 56.2
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 3.9e-135 485.7 448 56.0
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 5.1e-135 485.3 462 54.1
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 1.5e-134 483.8 472 56.6
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 5.7e-134 481.9 463 56.2
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.7e-133 480.3 472 56.4
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 4.8e-133 478.8 446 57.0
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 4.8e-133 478.8 445 56.2
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 4.8e-133 478.8 445 56.2
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 4.8e-133 478.8 445 56.2
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 4.8e-133 478.8 399 59.4
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 1.1e-132 477.6 462 55.2
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 1.8e-132 476.9 466 56.0
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 3.1e-132 476.1 446 55.6
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 3.1e-132 476.1 469 55.7
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 9.1e-132 474.6 415 58.1
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 3.4e-131 472.6 459 55.1
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 7.7e-131 471.5 476 53.8
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 1.4e-129 467.2 466 54.3
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 2.5e-129 466.5 505 52.3
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 2.6e-126 456.4 419 58.0
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 1.3e-125 454.1 482 52.1
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 2.8e-125 453.0 488 52.3
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 6.3e-125 451.8 436 55.3
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 1.4e-124 450.7 463 53.8
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 1.3e-122 444.1 455 52.3
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 4.8e-117 425.6 472 49.8
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 4.1e-116 422.5 423 48.9
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.7e-99 366.7 440 45.2
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 2.0e-86 323.9 321 54.5
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 3.3e-81 306.6 352 47.4
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 2.9e-77 293.5 209 66.0
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 1.1e-76 291.6 246 59.8
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 2.1e-75 287.3 481 39.7
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 7.8e-75 285.4 346 47.4
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 2.8e-72 276.9 320 50.9
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 9.9e-70 268.5 385 41.0
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 1.6e-56 224.6 298 41.6
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 1.7e-53 214.5 390 37.4
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 2.0e-46 191.0 219 53.4
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.1e-32 144.4 392 32.4
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 1.5e-30 138.3 170 47.1
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 1.7e-29 134.8 366 30.3
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 2.2e-29 134.4 110 59.1
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 8.4e-29 132.5 129 55.0
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 8.7e-26 122.5 320 32.8
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.1e-25 122.1 342 29.5
Pp3c11_9510 Physcomitrium patens HOM05D006399 ORTHO05D007988 3.8e-21 107.1 472 26.3
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 4.2e-20 103.6 255 33.3
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 2.0e-17 94.7 57 73.7
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 9.1e-07 59.3 38 63.2


User provided reference genes

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