Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G0591 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.2e-86 323.2 160 100.0
FAN24G2717 Fragaria x ananassa HOM05D006199 ORTHO05D006558 5.8e-70 267.7 141 94.3
FAN20G1063 Fragaria x ananassa HOM05D006199 ORTHO05D006558 3.7e-69 265.0 139 95.0
FvH4_2g01260 Fragaria vesca HOM05D006199 ORTHO05D006558 5.4e-68 261.2 139 93.5
FAN27G0272 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.3e-66 256.5 139 92.8
FAN06G5031 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.1e-65 253.4 133 95.5
RcHm_v2.0_Chr6g0251921 Rosa chinensis HOM05D006199 ORTHO05D006558 3.6e-64 248.4 139 89.2
FvH4_4g14930 Fragaria vesca HOM05D006199 ORTHO05D006558 1.5e-54 216.5 133 82.0
FAN06G2201 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.2e-46 190.3 157 68.8
Cfa005236 Carpinus fangiana HOM05D006199 ORTHO05D006558 2.0e-46 189.5 146 64.4
MD10G1095100 Malus domestica HOM05D006199 ORTHO05D006558 4.4e-46 188.3 161 62.1
Haze_02147 Corylus avellana HOM05D006199 ORTHO05D006558 2.4e-44 182.6 146 62.3
ClCG02G011890 Citrullus lanatus HOM05D006199 ORTHO05D006558 3.2e-44 182.2 150 58.7
CiPaw.05G081500 Carya illinoinensis HOM05D006199 ORTHO05D006558 1.6e-43 179.9 146 61.6
QL11p050170 Quercus lobata HOM05D006199 ORTHO05D006558 2.1e-43 179.5 146 63.7
CsaV3_2G016060 Cucumis sativus L. HOM05D006199 ORTHO05D006558 3.5e-43 178.7 150 56.7
Oeu050364.1 Olea europaea HOM05D006199 ORTHO05D006558 3.5e-43 178.7 146 62.3
Cpa.g.sc37.143 Carica papaya HOM05D006199 ORTHO05D006558 6.0e-43 177.9 141 59.6
Gohir.D01G159100 Gossypium hirsutum HOM05D006199 ORTHO05D006558 1.3e-42 176.8 140 64.3
Gorai.002G197400 Gossypium raimondii HOM05D006199 ORTHO05D006558 1.3e-42 176.8 140 64.3
SHI05731 Sapria himalayana HOM05D006199 ORTHO05D006558 1.3e-42 176.8 141 63.8
Sed0003263 Sechium edule HOM05D006199 ORTHO05D006558 1.7e-42 176.4 135 60.0
Gohir.A01G168100 Gossypium hirsutum HOM05D006199 ORTHO05D006558 3.0e-42 175.6 146 62.3
Sabra09G0104300 Salix brachista HOM05D006199 ORTHO05D006558 3.0e-42 175.6 141 63.8
CAN.G588.74 Capsicum annuum HOM05D006199 ORTHO05D006558 5.1e-42 174.9 145 62.1
Manes.04G075600 Manihot esculenta HOM05D006199 ORTHO05D006558 6.6e-42 174.5 127 65.4
Solyc01g111550.3 Solanum lycopersicum HOM05D006199 ORTHO05D006558 6.6e-42 174.5 152 59.9
Phvul.009G119500 Phaseolus vulgaris HOM05D006199 ORTHO05D006558 1.1e-41 173.7 140 63.6
Sopen01g053590 Solanum pennellii HOM05D006199 ORTHO05D006558 3.3e-41 172.2 152 59.2
Cc02_g16220 Coffea canephora HOM05D006199 ORTHO05D006558 4.3e-41 171.8 144 61.8
Duzib132G0247 Durio zibethinus HOM05D006199 ORTHO05D006558 4.3e-41 171.8 140 62.9
PGSC0003DMG400006190 Solanum tuberosum HOM05D006199 ORTHO05D006558 4.3e-41 171.8 152 59.2
GSVIVG01024030001 Vitis vinifera HOM05D006199 ORTHO05D006558 4.3e-41 171.8 146 61.6
Actinidia00620 Actinidia chinensis HOM05D006199 ORTHO05D006558 5.6e-41 171.4 148 60.8
Dinv41943 Davidia involucrata HOM05D006199 ORTHO05D006558 5.6e-41 171.4 146 60.3
CANSAT25G2535 Cannabis sativa HOM05D006199 ORTHO05D006558 9.6e-41 170.6 139 62.6
Potri.009G134500 Populus trichocarpa HOM05D006199 ORTHO05D006558 1.6e-40 169.9 141 63.1
TWI75G1548 Tripterygium wilfordii HOM05D006199 ORTHO05D006558 1.6e-40 169.9 141 62.4
Aa31LG7G15660 Aethionema arabicum HOM05D006199 ORTHO05D006558 2.8e-40 169.1 146 59.6
AT2G20980 Arabidopsis thaliana HOM05D006199 ORTHO05D006558 4.7e-40 168.3 146 56.8
Eucgr.I01413 Eucalyptus grandis HOM05D006199 ORTHO05D006558 4.7e-40 168.3 140 58.6
Nitab4.5_0006645g0060 Nicotiana tabacum HOM05D006199 ORTHO05D006558 4.7e-40 168.3 152 58.6
VMungo1309G0102 Vigna mungo HOM05D006199 ORTHO05D006558 6.2e-40 167.9 140 60.0
Hund00025 Selenicereus undatus HOM05D006199 ORTHO05D006558 8.1e-40 167.5 142 58.5
Nitab4.5_0005853g0010 Nicotiana tabacum HOM05D006199 ORTHO05D006558 1.1e-39 167.2 152 58.6
AL4G10110 Arabidopsis lyrata HOM05D006199 ORTHO05D006558 1.4e-39 166.8 145 57.2
MSTRG.19995 Avicennia marina HOM05D006199 ORTHO05D006558 1.8e-39 166.4 140 60.0
Sc18g0006460 Simmondsia chinensis HOM05D006199 ORTHO05D006558 2.4e-39 166.0 123 62.6
Ciclev10028644m.g Citrus clementina HOM05D006199 ORTHO05D006558 4.0e-39 165.2 146 57.5
EL10Ac9g21386 Beta vulgaris HOM05D006199 ORTHO05D006558 5.3e-39 164.9 140 57.1
COL.COLO4_17328 Corchorus olitorius HOM05D006199 ORTHO05D006558 5.3e-39 164.9 140 60.0
Thhalv10000193m.g Eutrema salsugineum HOM05D006199 ORTHO05D006558 5.3e-39 164.9 140 62.1
Carub.0004s0005 Capsella rubella HOM05D006199 ORTHO05D006558 6.9e-39 164.5 146 55.5
Lj5A179T83 Lonicera japonica HOM05D006199 ORTHO05D006558 1.2e-38 163.7 138 62.3
Rhsim11G0191800 Rhododendron simsii HOM05D006199 ORTHO05D006558 2.0e-38 162.9 147 57.8
THA.LOC104807811 Tarenaya hassleriana HOM05D006199 ORTHO05D006558 2.0e-38 162.9 140 57.9
Nn5g30772 Nelumbo nucifera HOM05D006199 ORTHO05D006558 3.4e-38 162.2 145 56.6
Thecc.02G060900 Theobroma cacao HOM05D006199 ORTHO05D006558 3.4e-38 162.2 140 60.0
PGR142G1980 Punica granatum HOM05D006199 ORTHO05D006558 4.4e-38 161.8 139 58.3
DCAR_022808 Daucus carota HOM05D006199 ORTHO05D006558 5.8e-38 161.4 167 55.7
Lsat_1_v5_gn_4_71580 Lactuca sativa HOM05D006199 ORTHO05D006558 7.6e-38 161.0 146 56.8
CSS0017687 Camellia sinensis var. sinensis HOM05D006199 ORTHO05D006558 2.2e-37 159.5 135 58.5
AUR62013038 Chenopodium quinoa HOM05D006199 ORTHO05D006558 2.2e-37 159.5 141 55.3
Sp4g00170 Schrenkiella parvula HOM05D006199 ORTHO05D006558 6.4e-37 157.9 139 54.7
MELO3C020815.2 Cucumis melo HOM05D006199 ORTHO05D006558 8.4e-37 157.5 199 43.7
AUR62010046 Chenopodium quinoa HOM05D006199 ORTHO05D006558 1.4e-36 156.8 140 55.0
Glyma.04G003800 Glycine max HOM05D006199 ORTHO05D006558 1.9e-36 156.4 140 59.3
HanXRQChr10g0300911 Helianthus annuus HOM05D006199 ORTHO05D006558 2.4e-36 156.0 146 56.2
TAR628G1195 Trochodendron aralioides HOM05D006199 ORTHO05D006558 2.4e-36 156.0 131 57.3
FvH4_7g17270 Fragaria vesca HOM05D006199 ORTHO05D006558 4.2e-36 155.2 81 95.1
Lj1g0009253 Lotus japonicus HOM05D006199 ORTHO05D006558 5.4e-36 154.8 144 56.2
CARHR111860 Cardamine hirsuta HOM05D006199 ORTHO05D006558 9.3e-36 154.1 153 53.6
arahy.Tifrunner.gnm1.ann1.H9ZTXG Arachis hypogaea HOM05D006199 ORTHO05D006558 1.2e-35 153.7 142 56.3
Migut.B00085 Erythranthe guttata HOM05D006199 ORTHO05D006558 1.6e-35 153.3 140 56.4
arahy.Tifrunner.gnm1.ann1.WS10KT Arachis hypogaea HOM05D006199 ORTHO05D006558 6.0e-35 151.4 166 50.6
vmacro02274 Vaccinium macrocarpon HOM05D006199 ORTHO05D006558 1.0e-34 150.6 149 53.7
Ca_15302_v3 Cicer arietinum L. HOM05D006199 ORTHO05D006558 1.3e-34 150.2 123 58.5
ECA234G0878 Erigeron canadensis HOM05D006199 ORTHO05D006558 1.3e-34 150.2 166 50.0
A03p27410 Brassica napus HOM05D006199 ORTHO05D006558 2.3e-34 149.4 147 55.1
Prupe.8G164900 Prunus persica HOM05D006199 ORTHO05D006558 2.3e-34 149.4 140 57.1
Ah.01g022950 Amaranthus hybridus HOM05D006199 ORTHO05D006558 3.0e-34 149.1 141 51.8
SalBow1G2578 Salvia bowleyana HOM05D006199 ORTHO05D006558 3.9e-34 148.7 154 51.3
Peaxi162Scf00362g00651 Petunia axillaris HOM05D006199 ORTHO05D006558 8.7e-34 147.5 153 54.2
BcaC01g04861 Brassica carinata HOM05D006199 ORTHO05D006558 1.9e-33 146.4 147 54.4
C03p33040 Brassica napus HOM05D006199 ORTHO05D006558 1.9e-33 146.4 147 54.4
BraA03t11952Z Brassica rapa HOM05D006199 ORTHO05D006558 2.5e-33 146.0 147 53.7
CiPaw.06G122500 Carya illinoinensis HOM05D006199 ORTHO05D006558 2.5e-33 146.0 131 55.7
BolC3t15631H Brassica oleracea HOM05D006199 ORTHO05D006558 9.6e-33 144.1 147 53.7
TPR.G38477 Trifolium pratense HOM05D006199 ORTHO05D006558 3.6e-32 142.1 142 52.8
PSO675G4200 Papaver somniferum HOM05D006199 ORTHO05D006558 8.1e-32 141.0 147 49.0
MBI08_g14630_MAGBIO Magnolia biondii HOM05D006199 ORTHO05D006558 4.0e-31 138.7 152 51.3
PSO541G4917 Papaver somniferum HOM05D006199 ORTHO05D006558 1.2e-30 137.1 147 47.6
Atru.chr5.3311 Acer truncatum HOM05D006199 ORTHO05D006558 4.5e-30 135.2 129 53.5
Medtr3g117880 Medicago truncatula HOM05D006199 ORTHO05D006558 9.9e-30 134.0 137 49.6
ATR0078G008 Amborella trichopoda HOM05D006199 ORTHO05D006558 3.9e-26 122.1 146 45.2
BcaB07g29803 Brassica carinata HOM05D006199 ORTHO05D006558 1.1e-25 120.6 147 46.9
unitig_37.g12834 Utricularia gibba HOM05D006199 ORTHO05D006558 3.3e-25 119.0 140 44.3
Aqoxy6G02177 Aquilegia oxysepala HOM05D006199 ORTHO05D006558 2.1e-24 116.3 142 45.1
Zm00001eb331950 Zea mays HOM05D006199 ORTHO05D006558 3.7e-24 115.5 124 46.8
Lalb_Chr23g0265011 Lupinus albus HOM05D006199 ORTHO05D006558 1.8e-23 113.2 99 56.6
Os09g0539400 Oryza sativa ssp. japonica HOM05D006199 ORTHO05D006558 2.4e-23 112.8 125 48.0
FvH4_2g23470 Fragaria vesca HOM05D006199 ORTHO05D006558 4.0e-23 112.1 61 85.2
FAN14G5753 Fragaria x ananassa HOM05D006199 ORTHO05D006558 3.4e-22 109.0 54 94.4
FAN24G0607 Fragaria x ananassa HOM05D006199 ORTHO05D006558 3.4e-22 109.0 53 96.2
FAN14G4166 Fragaria x ananassa HOM05D006199 ORTHO05D006558 2.2e-21 106.3 53 94.3
FvH4_1g02330 Fragaria vesca HOM05D006199 ORTHO05D006558 3.8e-21 105.5 54 90.7
FvH4_4g05800 Fragaria vesca HOM05D006199 ORTHO05D006558 8.4e-21 104.4 55 94.5
AagrBONN_evm.TU.Sc2ySwM_362.2501 Anthoceros agrestis HOM05D006199 ORTHO05D006558 1.6e-19 100.1 144 37.5
Mapoly0068s0001 Marchantia polymorpha HOM05D006199 ORTHO05D006558 3.5e-19 99.0 145 37.2
AUR62027127 Chenopodium quinoa HOM05D006199 ORTHO05D006558 3.0e-18 95.9 140 42.9
Pp3c15_24300 Physcomitrium patens HOM05D006199 ORTHO05D006558 3.9e-18 95.5 144 36.8
HPP92_008341 Vanilla planifolia HOM05D006199 ORTHO05D006558 5.1e-18 95.1 115 47.8
FAN11G3400 Fragaria x ananassa HOM05D006199 ORTHO05D006558 2.1e-16 89.7 51 84.3
RcHm_v2.0_Chr5g0048301 Rosa chinensis HOM05D006199 ORTHO05D006558 4.9e-13 78.6 78 57.7
Psat5g002720 Pisum sativum HOM05D006199 ORTHO05D006558 1.0e-10 70.9 91 45.1
MCO03G518 Micromonas commoda HOM05D006199 ORTHO05D006558 3.9e-10 68.9 89 43.8


User provided reference genes

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