Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G0590 Fragaria x ananassa HOM05D002231 ORTHO05D006103 2.1e-118 429.1 224 100.0
FAN07G0699 Fragaria x ananassa HOM05D002231 ORTHO05D006103 1.2e-110 403.3 224 94.6
FvH4_4g23720 Fragaria vesca HOM05D002231 ORTHO05D006103 1.7e-104 382.9 206 96.6
FAN22G0585 Fragaria x ananassa HOM05D002231 ORTHO05D006103 3.0e-101 372.1 224 88.4
FAN17G0493 Fragaria x ananassa HOM05D002231 ORTHO05D005593 5.7e-100 367.9 223 87.9
RcHm_v2.0_Chr4g0430201 Rosa chinensis HOM05D002231 ORTHO05D006103 9.2e-90 334.0 229 79.9
MD16G1119800 Malus domestica HOM05D002231 ORTHO05D006103 5.6e-87 324.7 229 77.7
MD13G1119600 Malus domestica HOM05D002231 ORTHO05D006103 5.7e-84 314.7 229 75.5
Prupe.1G225400 Prunus persica HOM05D002231 ORTHO05D006103 1.4e-82 310.1 229 76.4
CiPaw.06G102900 Carya illinoinensis HOM05D002231 ORTHO05D006103 2.1e-70 269.6 233 67.4
Cfa009373 Carpinus fangiana HOM05D002231 ORTHO05D006103 8.1e-70 267.7 232 67.2
Dinv17566 Davidia involucrata HOM05D002231 ORTHO05D005593 4.0e-69 265.4 233 67.0
CiPaw.05G109300 Carya illinoinensis HOM05D002231 ORTHO05D006103 1.2e-68 263.8 233 65.2
Dinv10954 Davidia involucrata HOM05D002231 ORTHO05D006103 7.5e-68 261.2 236 65.7
GSVIVG01010488001 Vitis vinifera HOM05D002231 ORTHO05D006103 2.9e-67 259.2 225 68.0
CANSAT01G1083 Cannabis sativa HOM05D002231 ORTHO05D006103 1.4e-66 256.9 235 64.7
Thecc.02G207900 Theobroma cacao HOM05D002231 ORTHO05D006103 1.2e-65 253.8 240 62.9
CSS0047868 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 4.6e-65 251.9 234 64.1
CSS0048016 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 4.6e-65 251.9 234 64.1
Gohir.D01G147100 Gossypium hirsutum HOM05D002231 ORTHO05D006103 6.0e-65 251.5 237 63.7
Nn3g16455 Nelumbo nucifera HOM05D002231 ORTHO05D006103 7.8e-65 251.1 232 63.4
Hma1.2p1_0275F.1_g110740 Hydrangea macrophylla HOM05D002231 ORTHO05D006103 1.3e-64 250.4 247 61.9
QL03p052604 Quercus lobata HOM05D002231 ORTHO05D006103 1.7e-64 250.0 283 55.5
Gohir.A01G160300 Gossypium hirsutum HOM05D002231 ORTHO05D006103 2.3e-64 249.6 237 62.0
Ciclev10032446m.g Citrus clementina HOM05D002231 ORTHO05D006103 5.1e-64 248.4 236 62.3
Gorai.002G183300 Gossypium raimondii HOM05D002231 ORTHO05D006103 8.6e-64 247.7 237 62.4
Manes.12G011000 Manihot esculenta HOM05D002231 ORTHO05D006103 1.6e-62 243.4 241 60.6
Actinidia30646 Actinidia chinensis HOM05D002231 ORTHO05D006103 2.1e-62 243.0 236 64.0
MSTRG.501 Avicennia marina HOM05D002231 ORTHO05D006103 6.2e-62 241.5 238 60.1
Duzib251G0325 Durio zibethinus HOM05D002231 ORTHO05D006103 4.0e-61 238.8 246 59.3
arahy.Tifrunner.gnm1.ann1.4LX5KX Arachis hypogaea HOM05D002231 ORTHO05D006103 6.8e-61 238.0 226 61.9
arahy.Tifrunner.gnm1.ann1.A5UQ16 Arachis hypogaea HOM05D002231 ORTHO05D006103 6.8e-61 238.0 226 61.9
Cc11_g16940 Coffea canephora HOM05D002231 ORTHO05D006103 8.9e-61 237.7 233 63.5
TWI36G0137 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 1.2e-60 237.3 228 62.7
Sc11g0000450 Simmondsia chinensis HOM05D002231 ORTHO05D006103 1.5e-60 236.9 247 59.1
Glyma.11G250900 Glycine max HOM05D002231 ORTHO05D006103 2.0e-60 236.5 227 62.1
Glyma.18G006100 Glycine max HOM05D002231 ORTHO05D006103 4.4e-60 235.3 227 61.7
Potri.001G056500 Populus trichocarpa HOM05D002231 ORTHO05D006103 4.4e-60 235.3 236 60.2
Rhsim12G0025500 Rhododendron simsii HOM05D002231 ORTHO05D006103 4.4e-60 235.3 251 59.4
Phvul.001G262200 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 9.9e-60 234.2 228 61.0
Atru.chr11.2328 Acer truncatum HOM05D002231 ORTHO05D006103 1.3e-59 233.8 204 67.2
EL10Ac6g13507 Beta vulgaris HOM05D002231 ORTHO05D006103 1.7e-59 233.4 230 61.3
Lsat_1_v5_gn_4_3541 Lactuca sativa HOM05D002231 ORTHO05D006103 2.9e-59 232.6 236 58.9
SGA_v2.0_scaffold9G04675 Striga asiatica HOM05D002231 ORTHO05D006103 6.4e-59 231.5 237 58.6
TPR.G17792 Trifolium pratense HOM05D002231 ORTHO05D006103 8.4e-59 231.1 226 59.7
PSO017G2330 Papaver somniferum HOM05D002231 ORTHO05D006103 1.4e-58 230.3 229 60.7
Lalb_Chr23g0278101 Lupinus albus HOM05D002231 ORTHO05D006103 1.9e-58 229.9 225 59.1
Psat5g096440 Pisum sativum HOM05D002231 ORTHO05D006103 4.1e-58 228.8 225 60.4
VMungo1383G1118 Vigna mungo HOM05D002231 ORTHO05D006103 4.1e-58 228.8 228 61.0
Migut.J00960 Erythranthe guttata HOM05D002231 ORTHO05D006103 5.4e-58 228.4 239 57.7
Potri.003G172000 Populus trichocarpa HOM05D002231 ORTHO05D006103 5.4e-58 228.4 236 56.8
Nitab4.5_0002558g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.2e-57 227.3 234 58.1
Sed0020663 Sechium edule HOM05D002231 ORTHO05D006103 1.2e-57 227.3 234 59.4
Lalb_Chr08g0230621 Lupinus albus HOM05D002231 ORTHO05D006103 1.6e-57 226.9 235 56.6
Eucgr.B03496 Eucalyptus grandis HOM05D002231 ORTHO05D006103 3.5e-57 225.7 250 54.8
Sabra03G0125900 Salix brachista HOM05D002231 ORTHO05D005593 3.5e-57 225.7 233 57.5
Gohir.A04G139800 Gossypium hirsutum HOM05D002231 ORTHO05D006103 6.0e-57 224.9 242 57.4
CDE02G1146 Ceratophyllum demersum HOM05D002231 ORTHO05D006103 1.0e-56 224.2 223 60.5
CsaV3_5G030240 Cucumis sativus L. HOM05D002231 ORTHO05D006103 1.0e-56 224.2 226 58.8
Medtr3g085280 Medicago truncatula HOM05D002231 ORTHO05D006103 1.0e-56 224.2 235 57.0
Lj6g0006303 Lotus japonicus HOM05D002231 ORTHO05D006103 1.3e-56 223.8 172 70.3
MSTRG.8006 Avicennia marina HOM05D002231 ORTHO05D006103 3.0e-56 222.6 236 57.2
Aqoxy5G03366 Aquilegia oxysepala HOM05D002231 ORTHO05D006103 3.9e-56 222.2 243 59.3
Lj3C1069T6 Lonicera japonica HOM05D002231 ORTHO05D006103 5.1e-56 221.9 200 64.5
Sopen04g017470 Solanum pennellii HOM05D002231 ORTHO05D006103 6.6e-56 221.5 235 56.6
Sabra01G0040900 Salix brachista HOM05D002231 ORTHO05D006103 1.1e-55 220.7 247 57.1
AUR62028925 Chenopodium quinoa HOM05D002231 ORTHO05D006103 1.9e-55 219.9 224 58.9
PGR102G0892 Punica granatum HOM05D002231 ORTHO05D006103 2.5e-55 219.5 245 55.1
Gorai.012G176000 Gossypium raimondii HOM05D002231 ORTHO05D006103 4.3e-55 218.8 241 56.4
ClCG11G013620 Citrullus lanatus HOM05D002231 ORTHO05D006103 5.6e-55 218.4 233 56.7
Manes.13G011701 Manihot esculenta HOM05D002231 ORTHO05D006103 5.6e-55 218.4 203 62.6
Nitab4.5_0000067g0140 Nicotiana tabacum HOM05D002231 ORTHO05D006103 5.6e-55 218.4 259 53.3
Gohir.D04G183000 Gossypium hirsutum HOM05D002231 ORTHO05D006103 7.3e-55 218.0 243 56.0
Aa31LG7G9850 Aethionema arabicum HOM05D002231 ORTHO05D006103 1.6e-54 216.9 234 55.6
Sp1g23610 Schrenkiella parvula HOM05D002231 ORTHO05D006103 1.6e-54 216.9 232 56.9
TAR629G1028 Trochodendron aralioides HOM05D002231 ORTHO05D006103 1.6e-54 216.9 181 66.3
A09p38550 Brassica napus HOM05D002231 ORTHO05D006103 3.6e-54 215.7 233 56.2
BraA07t28971Z Brassica rapa HOM05D002231 ORTHO05D006103 3.6e-54 215.7 231 56.7
Hund25467 Selenicereus undatus HOM05D002231 ORTHO05D006103 3.6e-54 215.7 232 55.6
unitig_747.g21125 Utricularia gibba HOM05D002231 ORTHO05D006103 3.6e-54 215.7 169 68.6
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 4.7e-54 215.3 182 65.9
C07p17810 Brassica napus HOM05D002231 ORTHO05D006103 8.1e-54 214.5 231 56.7
BolC7t42287H Brassica oleracea HOM05D002231 ORTHO05D006103 8.1e-54 214.5 231 56.7
vmacro01059 Vaccinium macrocarpon HOM05D002231 ORTHO05D006103 8.1e-54 214.5 299 50.2
BolC5t31328H Brassica oleracea HOM05D002231 ORTHO05D006103 1.1e-53 214.2 232 55.6
BraA09t39361Z Brassica rapa HOM05D002231 ORTHO05D006103 1.1e-53 214.2 231 56.3
THA.LOC104807538 Tarenaya hassleriana HOM05D002231 ORTHO05D006103 1.1e-53 214.2 239 54.4
Carub.0001s2592 Capsella rubella HOM05D002231 ORTHO05D006103 1.4e-53 213.8 232 55.2
BcaC06g35283 Brassica carinata HOM05D002231 ORTHO05D006103 2.4e-53 213.0 231 56.3
A07p11870 Brassica napus HOM05D002231 ORTHO05D006103 3.1e-53 212.6 231 56.3
AL1G40790 Arabidopsis lyrata HOM05D002231 ORTHO05D006103 4.0e-53 212.2 232 55.2
Phvul.L002246 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 4.0e-53 212.2 225 58.2
Lsat_1_v5_gn_3_31041 Lactuca sativa HOM05D002231 ORTHO05D006103 6.8e-53 211.5 229 55.5
CARHR026970 Cardamine hirsuta HOM05D002231 ORTHO05D006103 1.2e-52 210.7 232 54.7
ECA234G2919 Erigeron canadensis HOM05D002231 ORTHO05D006103 2.6e-52 209.5 153 71.9
Thhalv10008813m.g Eutrema salsugineum HOM05D002231 ORTHO05D006103 2.6e-52 209.5 240 54.6
AT1G27385 Arabidopsis thaliana HOM05D002231 ORTHO05D006103 3.4e-52 209.1 230 54.8
C05p26090 Brassica napus HOM05D002231 ORTHO05D006103 3.4e-52 209.1 228 54.8
TWI18G1086 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 5.8e-52 208.4 206 61.2
Peaxi162Scf00518g00424 Petunia axillaris HOM05D002231 ORTHO05D006103 7.6e-52 208.0 185 64.3
SalBow1G3407 Salvia bowleyana HOM05D002231 ORTHO05D006103 2.9e-51 206.1 309 45.3
MELO3C011862.2 Cucumis melo HOM05D002231 ORTHO05D006103 3.8e-51 205.7 238 53.4
Haze_12423 Corylus avellana HOM05D002231 ORTHO05D006103 8.4e-51 204.5 162 71.0
Solyc04g045580.4 Solanum lycopersicum HOM05D002231 ORTHO05D006103 1.4e-50 203.8 194 60.3
Glyma.08G104500 Glycine max HOM05D002231 ORTHO05D006103 4.2e-50 202.2 224 57.1
Ca_16456_v3 Cicer arietinum L. HOM05D002231 ORTHO05D006103 9.3e-50 201.1 184 62.5
Ah.02g130890 Amaranthus hybridus HOM05D002231 ORTHO05D006103 7.8e-49 198.0 225 56.9
Duzib248G1458 Durio zibethinus HOM05D002231 ORTHO05D006103 7.8e-49 198.0 240 52.1
Cpa.g.sc808.1 Carica papaya HOM05D002231 ORTHO05D006103 1.1e-47 194.1 143 70.6
Zm00001eb421060 Zea mays HOM05D002231 ORTHO05D006103 1.1e-47 194.1 154 66.9
MBI11_g05330_MAGBIO Magnolia biondii HOM05D002231 ORTHO05D006103 3.3e-47 192.6 186 65.1
Nn4g22308 Nelumbo nucifera HOM05D002231 ORTHO05D006103 3.3e-47 192.6 175 60.6
BcaC05g26552 Brassica carinata HOM05D002231 ORTHO05D006103 7.3e-47 191.4 191 58.6
BcaB03g13989 Brassica carinata HOM05D002231 ORTHO05D006103 9.6e-47 191.0 189 59.3
BcaC05g26745 Brassica carinata HOM05D002231 ORTHO05D006103 9.6e-47 191.0 189 58.7
Lj4g0021495 Lotus japonicus HOM05D002231 ORTHO05D006103 1.3e-46 190.7 247 49.4
HanXRQChr12g0385441 Helianthus annuus HOM05D002231 ORTHO05D006103 1.1e-45 187.6 189 60.3
Os02g0507400 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 4.0e-45 185.7 157 60.5
Os04g0386500 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 1.5e-44 183.7 158 62.7
Oeu029193.1 Olea europaea HOM05D002231 ORTHO05D006103 2.0e-44 183.3 164 64.0
HanXRQChr06g0174651 Helianthus annuus HOM05D002231 ORTHO05D006103 3.4e-44 182.6 171 55.6
SalBow8G1223 Salvia bowleyana HOM05D002231 ORTHO05D006103 5.8e-44 181.8 157 63.7
Oeu049136.1 Olea europaea HOM05D002231 ORTHO05D006103 6.4e-43 178.3 201 54.7
ECA246G2515 Erigeron canadensis HOM05D002231 ORTHO05D006103 8.4e-43 177.9 154 58.4
COL.COLO4_20407 Corchorus olitorius HOM05D002231 ORTHO05D006103 1.4e-42 177.2 170 59.4
SalBow2G1775 Salvia bowleyana HOM05D002231 ORTHO05D006103 9.3e-42 174.5 165 60.6
Zm00001eb085510 Zea mays HOM05D002231 ORTHO05D006103 2.1e-41 173.3 184 56.0
AUR62005623 Chenopodium quinoa HOM05D002231 ORTHO05D006103 6.0e-41 171.8 230 50.0
DCAR_007004 Daucus carota HOM05D002231 ORTHO05D006103 3.9e-40 169.1 168 61.3
HanXRQChr08g0207851 Helianthus annuus HOM05D002231 ORTHO05D006103 3.6e-38 162.5 227 48.0
SMO364G0411 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 4.8e-38 162.2 160 59.4
ECA233G1565 Erigeron canadensis HOM05D002231 ORTHO05D006103 1.8e-37 160.2 215 47.9
Nitab4.5_0004003g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.5e-36 157.1 159 61.0
Nitab4.5_0000155g0190 Nicotiana tabacum HOM05D002231 ORTHO05D006103 7.6e-36 154.8 161 60.2
arahy.Tifrunner.gnm1.ann1.1IJF7J Arachis hypogaea HOM05D002231 ORTHO05D006103 9.9e-36 154.5 224 46.9
SMO246G0027 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 3.8e-35 152.5 156 54.5
Pp3c15_19360 Physcomitrium patens HOM05D002231 ORTHO05D006103 4.9e-35 152.1 181 52.5
arahy.Tifrunner.gnm1.ann1.RN2E3G Arachis hypogaea HOM05D002231 ORTHO05D006103 2.4e-34 149.8 223 48.9
AagrBONN_evm.TU.Sc2ySwM_368.423 Anthoceros agrestis HOM05D002231 ORTHO05D006103 9.3e-34 147.9 153 56.9
ATR0059G025 Amborella trichopoda HOM05D002231 ORTHO05D006103 2.1e-33 146.7 103 73.8
CBR_g57027 Chara braunii HOM05D002231 ORTHO05D006103 6.0e-33 145.2 156 51.3
Pp3c9_19480 Physcomitrium patens HOM05D002231 ORTHO05D006103 3.9e-32 142.5 169 51.5
DCAR_026462 Daucus carota HOM05D002231 ORTHO05D006103 2.5e-31 139.8 195 49.7
PRCOL_00004939 Prasinoderma coloniale HOM05D002231 ORTHO05D006103 1.3e-22 110.9 155 40.6
Lsat_1_v5_gn_4_56001 Lactuca sativa HOM05D002231 ORTHO05D006103 2.1e-22 110.2 193 40.9
RcHm_v2.0_Chr3g0491761 Rosa chinensis HOM05D002231 ORTHO05D006103 5.5e-18 95.5 85 67.1
TAR383G1026 Trochodendron aralioides HOM05D002231 ORTHO05D006103 1.5e-15 87.4 84 60.7
Cre12.g508300 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 4.1e-13 79.3 111 44.1
Cre02.g074700 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 3.4e-12 76.3 181 32.6
MCO02G005 Micromonas commoda HOM05D003605 ORTHO05D004292 2.9e-11 73.2 140 33.6
CDE05G2241 Ceratophyllum demersum HOM05D001859 ORTHO05D001836 1.6e-09 67.4 51 64.7
C02p58440 Brassica napus HOM05D001393 ORTHO05D032808 4.4e-07 59.3 39 69.2
TAR636G2964 Trochodendron aralioides HOM05D002231 ORTHO05D006103 1.7e-06 57.4 35 82.9
Cpa.g.sc43.61 Carica papaya HOM05D002231 ORTHO05D006103 4.8e-06 55.8 100 45.0


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