Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G4037 Fragaria x ananassa HOM05D003201 ORTHO05D008805 5.5e-43 177.2 86 100.0
FvH4_3g46100 Fragaria vesca HOM05D003201 ORTHO05D008805 1.8e-33 145.6 70 98.6
RcHm_v2.0_Chr5g0084171 Rosa chinensis HOM05D003201 ORTHO05D008805 2.0e-32 142.1 70 94.3
FAN25G1903 Fragaria x ananassa HOM05D003201 ORTHO05D008805 9.7e-32 139.8 75 92.0
Prupe.6G000300 Prunus persica HOM05D003201 ORTHO05D008805 4.7e-26 120.9 70 77.1
QL04p043008 Quercus lobata HOM05D003201 ORTHO05D008805 1.0e-25 119.8 70 75.7
FAN16G0934 Fragaria x ananassa HOM05D000104 ORTHO05D004363 2.3e-25 118.6 57 96.5
Duzib093G2193 Durio zibethinus HOM05D003201 ORTHO05D008805 1.2e-24 116.3 69 79.7
Lalb_Chr01g0008671 Lupinus albus HOM05D003201 ORTHO05D008805 1.5e-24 115.9 70 74.3
Thecc.05G124600 Theobroma cacao HOM05D003201 ORTHO05D008805 1.5e-24 115.9 70 77.1
MD11G1000200 Malus domestica HOM05D003201 ORTHO05D008805 2.6e-24 115.2 70 74.3
Solyc01g057570.3 Solanum lycopersicum HOM05D003201 ORTHO05D008805 2.6e-24 115.2 70 74.3
Sopen01g019970 Solanum pennellii HOM05D003201 ORTHO05D008805 2.6e-24 115.2 70 74.3
Sopen01g022430 Solanum pennellii HOM05D003201 ORTHO05D008805 2.6e-24 115.2 70 74.3
MELO3C024592.2 Cucumis melo HOM05D003201 ORTHO05D008805 7.5e-24 113.6 70 74.3
Gohir.D09G114700 Gossypium hirsutum HOM05D003201 ORTHO05D008805 7.5e-24 113.6 70 75.7
Gorai.006G132500 Gossypium raimondii HOM05D003201 ORTHO05D008805 7.5e-24 113.6 70 75.7
Gohir.A09G117900 Gossypium hirsutum HOM05D003201 ORTHO05D008805 9.7e-24 113.2 70 74.3
TAR623G0449 Trochodendron aralioides HOM05D003201 ORTHO05D008805 1.3e-23 112.8 70 72.9
CAN.G431.2 Capsicum annuum HOM05D003201 ORTHO05D008805 2.2e-23 112.1 70 72.9
ClCG01G015060 Citrullus lanatus HOM05D003201 ORTHO05D008805 2.2e-23 112.1 70 71.4
Potri.013G161600 Populus trichocarpa HOM05D003201 ORTHO05D008805 2.8e-23 111.7 70 77.1
Aqoxy5G03624 Aquilegia oxysepala HOM05D003201 ORTHO05D008805 3.7e-23 111.3 68 73.5
AUR62000916 Chenopodium quinoa HOM05D003201 ORTHO05D008805 3.7e-23 111.3 70 72.9
Ciclev10029320m.g Citrus clementina HOM05D003201 ORTHO05D008805 3.7e-23 111.3 70 72.9
Sc18g0002730 Simmondsia chinensis HOM05D003201 ORTHO05D008805 3.7e-23 111.3 70 70.0
arahy.Tifrunner.gnm1.ann1.75P5EB Arachis hypogaea HOM05D003201 ORTHO05D008805 4.8e-23 110.9 70 72.9
CSS0031904 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008805 4.8e-23 110.9 70 72.9
Cfa002302 Carpinus fangiana HOM05D003201 ORTHO05D008805 4.8e-23 110.9 61 80.3
Hma1.2p1_1133F.1_g260360 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 4.8e-23 110.9 70 71.4
Hma1.2p1_1133F.1_g260370 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 4.8e-23 110.9 70 71.4
GSVIVG01034815001 Vitis vinifera HOM05D003201 ORTHO05D008805 4.8e-23 110.9 70 74.3
Atru.chr2.209 Acer truncatum HOM05D003201 ORTHO05D008805 6.3e-23 110.5 70 72.9
HanXRQChr17g0555621 Helianthus annuus HOM05D003201 ORTHO05D008805 6.3e-23 110.5 70 72.9
Sabra13G0129200 Salix brachista HOM05D003201 ORTHO05D008805 6.3e-23 110.5 71 77.5
CsaV3_6G041170 Cucumis sativus L. HOM05D003201 ORTHO05D008805 8.3e-23 110.2 70 71.4
AUR62004843 Chenopodium quinoa HOM05D003201 ORTHO05D008805 1.1e-22 109.8 70 71.4
EL10Ac4g09260 Beta vulgaris HOM05D003201 ORTHO05D008805 1.4e-22 109.4 70 74.3
Migut.N00525 Erythranthe guttata HOM05D003201 ORTHO05D008805 2.4e-22 108.6 69 71.0
TWI34G1882 Tripterygium wilfordii HOM05D003201 ORTHO05D008805 3.1e-22 108.2 70 71.4
VMungo0464G1483 Vigna mungo HOM05D003201 ORTHO05D008805 3.1e-22 108.2 70 68.6
Dinv15525 Davidia involucrata HOM05D003201 ORTHO05D008805 4.1e-22 107.8 70 70.0
Phvul.004G131600 Phaseolus vulgaris HOM05D003201 ORTHO05D008805 4.1e-22 107.8 70 68.6
Actinidia16221 Actinidia chinensis HOM05D003201 ORTHO05D008805 1.2e-21 106.3 70 70.0
Medtr6g059320 Medicago truncatula HOM05D003201 ORTHO05D008805 1.2e-21 106.3 67 73.1
Cc01_g05060 Coffea canephora HOM05D003201 ORTHO05D008805 1.6e-21 105.9 64 75.0
TPR.G5800 Trifolium pratense HOM05D003201 ORTHO05D008805 1.6e-21 105.9 67 74.6
Peaxi162Scf01181g00210 Petunia axillaris HOM05D003201 ORTHO05D008805 2.0e-21 105.5 64 76.6
Psat1g112800 Pisum sativum HOM05D003201 ORTHO05D008805 2.0e-21 105.5 81 64.2
PSO339G6265 Papaver somniferum HOM05D003201 ORTHO05D008805 2.7e-21 105.1 64 71.9
Glyma.16G207100 Glycine max HOM05D003201 ORTHO05D008805 3.5e-21 104.8 70 68.6
unitig_0.g1143 Utricularia gibba HOM05D003201 ORTHO05D008805 3.5e-21 104.8 70 68.6
CANSAT35G1729 Cannabis sativa HOM05D003201 ORTHO05D008805 4.5e-21 104.4 64 71.9
ECA248G3933 Erigeron canadensis HOM05D003201 ORTHO05D008805 5.9e-21 104.0 64 71.9
Lj2g0011105 Lotus japonicus HOM05D003201 ORTHO05D008805 5.9e-21 104.0 70 67.1
SGA_v2.0_scaffold6G03334 Striga asiatica HOM05D003201 ORTHO05D008805 5.9e-21 104.0 69 68.1
PSO384G0221 Papaver somniferum HOM05D003201 ORTHO05D008805 7.7e-21 103.6 64 70.3
ATR0068G091 Amborella trichopoda HOM05D003201 ORTHO05D008805 1.3e-20 102.8 64 71.9
MBI13_g39202_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 2.2e-20 102.1 70 68.6
MSTRG.12815 Avicennia marina HOM05D003201 ORTHO05D008805 3.8e-20 101.3 62 72.6
CDE02G2127 Ceratophyllum demersum HOM05D003201 ORTHO05D008805 3.8e-20 101.3 70 65.7
Glyma.09G156400 Glycine max HOM05D003201 ORTHO05D008805 5.0e-20 100.9 70 65.7
Lsat_1_v5_gn_1_71340 Lactuca sativa HOM05D003201 ORTHO05D008805 5.0e-20 100.9 63 71.4
THA.LOC104806236 Tarenaya hassleriana HOM05D003201 ORTHO05D008805 6.5e-20 100.5 70 65.7
arahy.Tifrunner.gnm1.ann1.F1EX5J Arachis hypogaea HOM05D003201 ORTHO05D008805 1.9e-19 99.0 89 57.3
CARHR227170 Cardamine hirsuta HOM05D003201 ORTHO05D008805 5.5e-19 97.4 70 62.9
Carub.0007s2082 Capsella rubella HOM05D003201 ORTHO05D008805 9.4e-19 96.7 64 68.8
HPP92_021155 Vanilla planifolia HOM05D003201 ORTHO05D008805 1.2e-18 96.3 69 63.8
AL7G33540 Arabidopsis lyrata HOM05D003201 ORTHO05D008805 2.7e-18 95.1 64 67.2
Pp3c2_18510 Physcomitrium patens HOM05D003201 ORTHO05D008805 2.7e-18 95.1 63 63.5
vmacro04280 Vaccinium macrocarpon HOM05D003201 ORTHO05D008805 2.7e-18 95.1 84 57.1
SEGI_31075 Sequoiadendron giganteum HOM05D003201 ORTHO05D008805 3.6e-18 94.7 68 63.2
Sp7g18690 Schrenkiella parvula HOM05D003201 ORTHO05D008805 8.0e-18 93.6 64 67.2
BcaC09g51346 Brassica carinata HOM05D003201 ORTHO05D008805 1.4e-17 92.8 64 65.6
DCAR_028397 Daucus carota HOM05D003201 ORTHO05D008805 1.4e-17 92.8 64 64.1
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 1.8e-17 92.4 70 58.6
Zm00001eb047810 Zea mays HOM05D003201 ORTHO05D008805 1.8e-17 92.4 62 62.9
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 2.3e-17 92.0 64 64.1
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 2.3e-17 92.0 64 64.1
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 2.3e-17 92.0 64 64.1
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 2.3e-17 92.0 64 64.1
Mapoly0007s0017 Marchantia polymorpha HOM05D003201 ORTHO05D008805 2.3e-17 92.0 72 56.9
Os10g0420000 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008805 5.2e-17 90.9 64 62.5
Thhalv10026088m.g Eutrema salsugineum HOM05D003201 ORTHO05D008805 6.8e-17 90.5 64 64.1
PGR119G1272 Punica granatum HOM05D003201 ORTHO05D008805 5.7e-16 87.4 56 73.2
CBR_g45550 Chara braunii HOM05D000019 ORTHO05D000353 2.2e-15 85.5 68 52.9
Rhsim13G0235500 Rhododendron simsii HOM05D003201 ORTHO05D008805 2.2e-15 85.5 98 46.9
Sed0008662 Sechium edule HOM05D003201 ORTHO05D008805 3.1e-14 81.6 56 69.6
SMO132G0004 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 2.0e-13 79.0 64 53.1
SMO147G0005 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 2.7e-13 78.6 64 53.1
Eucgr.J01718 Eucalyptus grandis HOM05D003201 ORTHO05D008805 4.7e-10 67.8 43 67.4
CiPaw.03G255400 Carya illinoinensis HOM05D003201 ORTHO05D008805 5.7e-08 60.8 29 89.7
Cre14.g632791 Chlamydomonas reinhardtii HOM05D003201 ORTHO05D008805 1.3e-07 59.7 65 47.7


User provided reference genes

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