Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G3939 Fragaria x ananassa HOM05D008485 ORTHO05D009647 6.4e-200 700.7 383 100.0
FAN13G3330 Fragaria x ananassa HOM05D008485 ORTHO05D009647 8.0e-195 683.7 379 97.9
FAN23G0398 Fragaria x ananassa HOM05D008485 ORTHO05D009647 8.0e-195 683.7 379 97.9
FAN23G3051 Fragaria x ananassa HOM05D008485 ORTHO05D009647 5.1e-189 664.5 365 98.6
FAN16G1636 Fragaria x ananassa HOM05D008485 ORTHO05D009647 8.3e-107 391.3 243 96.3
RcHm_v2.0_Chr6g0264941 Rosa chinensis HOM05D008485 ORTHO05D009647 1.7e-104 383.6 206 82.5
RcHm_v2.0_Chr1g0329081 Rosa chinensis HOM05D008485 ORTHO05D009647 1.5e-103 380.6 205 82.4
FAN10G1422 Fragaria x ananassa HOM05D008485 ORTHO05D009647 2.2e-91 340.1 158 99.4
FAN13G0756 Fragaria x ananassa HOM05D008485 ORTHO05D009647 1.6e-89 334.0 156 99.4
RcHm_v2.0_Chr5g0025151 Rosa chinensis HOM05D008485 ORTHO05D009647 1.3e-72 277.7 283 47.0
RcHm_v2.0_Chr5g0036581 Rosa chinensis HOM05D008485 ORTHO05D009647 2.2e-59 233.8 222 54.1
RcHm_v2.0_Chr5g0029021 Rosa chinensis HOM05D008485 ORTHO05D009647 2.4e-58 230.3 220 52.7
RcHm_v2.0_Chr5g0070861 Rosa chinensis HOM05D008485 ORTHO05D009647 7.1e-58 228.8 220 51.8
FvH4_1g18340 Fragaria vesca HOM05D008485 ORTHO05D009647 1.7e-56 224.2 123 82.1
FvH4_3g05430 Fragaria vesca HOM05D008485 ORTHO05D009647 1.7e-56 224.2 123 82.1
FAN17G2617 Fragaria x ananassa HOM05D008485 ORTHO05D009647 1.5e-55 221.1 111 87.4
RcHm_v2.0_Chr5g0041581 Rosa chinensis HOM05D008485 ORTHO05D009647 1.9e-47 194.1 218 48.6
RcHm_v2.0_Chr7g0208561 Rosa chinensis HOM05D008485 ORTHO05D009647 3.0e-40 170.2 211 42.2
RcHm_v2.0_Chr4g0434301 Rosa chinensis HOM05D008485 ORTHO05D009647 3.1e-37 160.2 122 57.4
RcHm_v2.0_Chr4g0403221 Rosa chinensis HOM05D008485 ORTHO05D009647 6.9e-37 159.1 122 56.6
FAN10G2059 Fragaria x ananassa HOM05D008485 ORTHO05D009647 4.5e-36 156.4 77 89.6
RcHm_v2.0_Chr1g0341051 Rosa chinensis HOM05D008485 ORTHO05D009647 2.9e-35 153.7 142 56.3
FAN16G1989 Fragaria x ananassa HOM05D008485 ORTHO05D009647 1.6e-30 137.9 65 100.0
RcHm_v2.0_Chr1g0381361 Rosa chinensis HOM05D016653 ORTHO05D009647 3.4e-28 130.2 218 30.7
RcHm_v2.0_Chr2g0094421 Rosa chinensis HOM05D008485 ORTHO05D009647 1.0e-27 128.6 122 46.7
RcHm_v2.0_Chr3g0477491 Rosa chinensis HOM05D009879 ORTHO05D009647 4.6e-25 119.8 200 32.5
Prupe.5G199500 Prunus persica HOM05D008985 ORTHO05D000222 1.5e-23 114.8 198 29.3
FvH4_1g01701 Fragaria vesca HOM05D002291 ORTHO05D000222 1.9e-23 114.4 218 29.8
FAN19G1637 Fragaria x ananassa HOM05D002291 ORTHO05D000222 1.9e-23 114.4 218 29.8
FAN28G2311 Fragaria x ananassa HOM05D002291 ORTHO05D000222 1.9e-23 114.4 218 29.8
RcHm_v2.0_Chr2g0086631 Rosa chinensis HOM05D002291 ORTHO05D000222 3.3e-23 113.6 218 29.8
RcHm_v2.0_Chr7g0206051 Rosa chinensis HOM05D008485 ORTHO05D009647 3.3e-23 113.6 99 55.6
RcHm_v2.0_Chr5g0007651 Rosa chinensis HOM05D009879 ORTHO05D009647 1.3e-22 111.7 183 30.6
FAN07G2263 Fragaria x ananassa HOM05D011706 ORTHO05D009647 2.8e-22 110.5 240 28.8
RcHm_v2.0_Chr5g0040531 Rosa chinensis HOM05D009879 ORTHO05D009647 4.8e-22 109.8 208 28.8
FAN26G1277 Fragaria x ananassa HOM05D002291 ORTHO05D000222 6.3e-22 109.4 176 34.1
FAN23G1656 Fragaria x ananassa HOM05D002291 ORTHO05D000222 8.2e-22 109.0 295 26.8
RcHm_v2.0_Chr1g0346821 Rosa chinensis HOM05D009879 ORTHO05D009647 1.1e-21 108.6 246 27.6
RcHm_v2.0_Chr1g0346841 Rosa chinensis HOM05D009879 ORTHO05D009647 1.0e-19 102.1 231 28.6
MELO3C031804.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.2e-19 100.9 215 31.2
RcHm_v2.0_Chr5g0076701 Rosa chinensis HOM05D008485 ORTHO05D009647 8.5e-19 99.0 105 42.9
FAN03G0178 Fragaria x ananassa HOM05D009879 ORTHO05D009647 1.1e-18 98.6 222 28.4
RcHm_v2.0_Chr1g0332631 Rosa chinensis HOM05D009879 ORTHO05D009647 1.4e-18 98.2 161 31.7
FvH4_7g09790 Fragaria vesca HOM05D009879 ORTHO05D009647 2.5e-18 97.4 250 28.4
FAN17G2464 Fragaria x ananassa HOM05D009879 ORTHO05D009647 3.2e-18 97.1 161 31.7
FAN21G1637 Fragaria x ananassa HOM05D008485 ORTHO05D009647 4.2e-18 96.7 52 86.5
RcHm_v2.0_Chr6g0272081 Rosa chinensis HOM05D008485 ORTHO05D009647 2.1e-17 94.4 105 41.0
FvH4_6g23072 Fragaria vesca HOM05D009879 ORTHO05D009647 2.7e-17 94.0 139 33.8
FAN06G0059 Fragaria x ananassa HOM05D009879 ORTHO05D009647 2.7e-17 94.0 220 28.2
MD03G1062700 Malus domestica HOM05D000514 ORTHO05D000222 2.7e-17 94.0 255 26.7
FAN06G1112 Fragaria x ananassa HOM05D009879 ORTHO05D009647 6.1e-17 92.8 220 27.7
FAN18G0028 Fragaria x ananassa HOM05D009879 ORTHO05D009647 1.8e-16 91.3 139 33.1
Dinv31455 Davidia involucrata HOM05D000791 ORTHO05D000669 2.3e-16 90.9 251 28.3
MD16G1222400 Malus domestica HOM05D000514 ORTHO05D000222 8.8e-16 89.0 256 26.6
Dinv24767 Davidia involucrata HOM05D000791 ORTHO05D000669 3.3e-15 87.0 216 28.2
FvH4_3g43970 Fragaria vesca HOM05D008485 ORTHO05D009647 4.4e-15 86.7 45 88.9
FAN14G0548 Fragaria x ananassa HOM05D002052 ORTHO05D000222 1.3e-14 85.1 217 29.5
FAN16G0255 Fragaria x ananassa HOM05D002052 ORTHO05D000222 2.2e-14 84.3 249 28.5
FAN15G1885 Fragaria x ananassa HOM05D002052 ORTHO05D000222 2.8e-14 84.0 249 28.5
FAN15G0006 Fragaria x ananassa HOM05D002052 ORTHO05D000222 3.7e-14 83.6 251 29.1
MBI19_g18856_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.7e-14 83.6 277 26.7
MD12G1110400 Malus domestica HOM05D000514 ORTHO05D000222 4.8e-14 83.2 179 25.7
Dinv01181 Davidia involucrata HOM05D000791 ORTHO05D000669 6.3e-14 82.8 212 29.7
FAN01G2912 Fragaria x ananassa HOM05D009879 ORTHO05D009647 6.3e-14 82.8 156 28.8
MBI12_g43234_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.3e-14 82.8 224 25.0
MD04G1142700 Malus domestica HOM05D000514 ORTHO05D000222 6.3e-14 82.8 156 28.2
FAN06G3008 Fragaria x ananassa HOM05D002052 ORTHO05D000222 8.2e-14 82.4 249 28.5
FAN21G0018 Fragaria x ananassa HOM05D002052 ORTHO05D000222 8.2e-14 82.4 232 29.3
MBI07_g22513_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.1e-13 82.0 258 26.4
PSO210G0630 Papaver somniferum HOM05D030578 ORTHO05D000669 1.1e-13 82.0 224 25.9
FAN21G3373 Fragaria x ananassa HOM05D002052 ORTHO05D000222 1.4e-13 81.6 249 28.5
RcHm_v2.0_Chr1g0378881 Rosa chinensis HOM05D008485 ORTHO05D009647 1.4e-13 81.6 47 78.7
Dinv16095 Davidia involucrata HOM05D000791 ORTHO05D000669 1.8e-13 81.3 211 28.4
CANSAT01G1847 Cannabis sativa HOM05D014621 ORTHO05D015019 4.1e-13 80.1 213 25.4
FAN21G3049 Fragaria x ananassa HOM05D002052 ORTHO05D000222 4.1e-13 80.1 224 28.6
MD09G1277700 Malus domestica HOM05D008485 ORTHO05D009647 4.1e-13 80.1 77 46.8
HanXRQChr05g0142331 Helianthus annuus HOM05D014621 ORTHO05D015019 9.1e-13 79.0 222 26.1
Atru.chr9.7 Acer truncatum HOM05D008705 ORTHO05D000669 1.2e-12 78.6 188 29.3
FAN17G2189 Fragaria x ananassa HOM05D002052 ORTHO05D000222 4.5e-12 76.6 249 27.7
Lj8A600T21 Lonicera japonica HOM05D008985 ORTHO05D000222 4.5e-12 76.6 223 23.8
MBI15_g13723_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.9e-12 76.3 281 24.6
MBI19_g01025_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.9e-12 76.3 310 25.8
FAN21G0826 Fragaria x ananassa HOM05D009879 ORTHO05D009647 2.2e-11 74.3 126 30.2
MD15G1306500 Malus domestica HOM05D000514 ORTHO05D000222 2.9e-11 73.9 141 28.4
MBI19_g26810_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.5e-11 72.4 146 28.1
MELO3C028799.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.1e-10 72.0 211 28.0
MBI13_g12520_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.1e-10 72.0 224 23.2
Dinv11320 Davidia involucrata HOM05D000791 ORTHO05D000669 1.4e-10 71.6 240 22.9
FAN05G4468 Fragaria x ananassa HOM05D005731 ORTHO05D000222 1.4e-10 71.6 188 26.6
CSS0026212 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 2.5e-10 70.9 243 26.3
MBI19_g27593_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.5e-10 70.9 258 26.0
MBI05_g43492_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.2e-10 69.3 149 30.9
Dinv09859 Davidia involucrata HOM05D000791 ORTHO05D000669 9.4e-10 68.9 174 27.0
MD03G1170400 Malus domestica HOM05D000514 ORTHO05D000222 1.2e-09 68.6 152 27.6
Lj1A283G17 Lonicera japonica HOM05D008705 ORTHO05D000669 1.6e-09 68.2 204 26.5
CSS0000180 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 2.1e-09 67.8 260 25.0
MBI12_g38023_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.1e-09 67.8 217 25.3
CSS0007712 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 2.7e-09 67.4 270 24.1
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 3.6e-09 67.0 278 25.5
MBI19_g18851_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.9e-09 65.9 157 26.8
FAN07G0023 Fragaria x ananassa HOM05D000483 ORTHO05D000158 1.0e-08 65.5 43 69.8
MBI11_g23002_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.4e-08 65.1 224 25.9
Lj6A369T4 Lonicera japonica HOM05D008985 ORTHO05D000222 1.8e-08 64.7 202 21.8
MBI05_g47419_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.3e-08 64.3 99 31.3
CSS0009810 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 3.0e-08 63.9 249 25.3
Dinv18594 Davidia involucrata HOM05D000791 ORTHO05D000669 3.0e-08 63.9 201 24.4
MBI18_g17722_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.0e-08 63.9 170 29.4
FAN01G1265 Fragaria x ananassa HOM05D008485 ORTHO05D009647 5.2e-08 63.2 32 87.5
FAN04G0640 Fragaria x ananassa HOM05D005731 ORTHO05D000222 5.2e-08 63.2 180 26.7
CSS0042483 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 6.7e-08 62.8 280 23.2
MBI09_g42043_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.8e-08 62.4 140 27.1
MBI03_g12026_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.1e-07 62.0 142 26.1
MBI18_g19501_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.5e-07 61.6 248 23.8
Oeu006554.1 Olea europaea HOM05D017951 ORTHO05D020916 1.5e-07 61.6 209 30.1
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.5e-07 61.6 271 24.7
MBI18_g07911_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.0e-07 61.2 180 24.4
MD16G1275200 Malus domestica HOM05D000514 ORTHO05D000222 3.3e-07 60.5 260 21.9
Dinv00424 Davidia involucrata HOM05D010418 ORTHO05D000669 4.4e-07 60.1 125 31.2
MBI03_g21547_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.7e-07 59.7 211 24.2
MBI07_g03727_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.7e-07 59.7 104 28.8
MBI09_g10054_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.4e-07 59.3 129 26.4
Prupe.6G193600 Prunus persica HOM05D000539 ORTHO05D000233 7.4e-07 59.3 226 27.0
ClCG04G001600 Citrullus lanatus HOM05D001963 ORTHO05D001863 1.7e-06 58.2 138 24.6
FAN17G2303 Fragaria x ananassa HOM05D002052 ORTHO05D000222 1.7e-06 58.2 246 24.8
SGA_v2.0_scaffold752G53551 Striga asiatica HOM05D025956 ORTHO05D000669 1.7e-06 58.2 225 23.6
Dinv06647 Davidia involucrata HOM05D010418 ORTHO05D000669 2.8e-06 57.4 123 28.5
Dinv03037 Davidia involucrata HOM05D010418 ORTHO05D000669 3.7e-06 57.0 125 30.4
Dinv03964 Davidia involucrata HOM05D010418 ORTHO05D000669 6.3e-06 56.2 124 30.6
MD05G1052900 Malus domestica HOM05D002170 ORTHO05D000222 6.3e-06 56.2 126 27.0
MELO3C033043.2 Cucumis melo HOM05D001963 ORTHO05D001863 8.2e-06 55.8 102 29.4
Dinv12412 Davidia involucrata HOM05D010418 ORTHO05D000669 8.2e-06 55.8 80 36.2
Dinv18123 Davidia involucrata HOM05D010418 ORTHO05D000669 8.2e-06 55.8 110 30.9
FAN01G1157 Fragaria x ananassa HOM05D005731 ORTHO05D000222 8.2e-06 55.8 176 23.9


User provided reference genes

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