Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G3832 Fragaria x ananassa HOM05D041726 ORTHO05D030934 2.5e-133 478.8 239 100.0
FAN21G2507 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.5e-42 177.2 94 93.6
FvH4_3g38474 Fragaria vesca HOM05D001326 ORTHO05D030934 3.8e-41 172.6 122 80.3
FvH4_3g38473 Fragaria vesca HOM05D041726 ORTHO05D045985 6.4e-41 171.8 81 97.5
FvH4_6g26130 Fragaria vesca HOM05D001115 ORTHO05D001023 4.8e-12 75.9 90 44.4
RcHm_v2.0_Chr2g0126211 Rosa chinensis HOM05D001115 ORTHO05D001023 4.8e-12 75.9 90 45.6
Prupe.3G155500 Prunus persica HOM05D001115 ORTHO05D001023 2.2e-09 67.0 92 41.3
MD17G1242500 Malus domestica HOM05D001115 ORTHO05D001023 1.1e-08 64.7 93 41.9
MELO3C006548.2 Cucumis melo HOM05D001326 ORTHO05D002471 5.5e-08 62.4 52 57.7
RcHm_v2.0_Chr4g0416981 Rosa chinensis HOM05D001326 ORTHO05D002471 7.2e-08 62.0 50 60.0
Glyma.12G111700 Glycine max HOM05D001115 ORTHO05D001023 1.2e-07 61.2 95 37.9
QL06p003512 Quercus lobata HOM05D001326 ORTHO05D002471 1.2e-07 61.2 52 59.6
GSVIVG01030374001 Vitis vinifera HOM05D001115 ORTHO05D001023 1.2e-07 61.2 93 40.9
HanXRQChr04g0118261 Helianthus annuus HOM05D001326 ORTHO05D002471 2.1e-07 60.5 49 59.2
EL10Ac8g20247 Beta vulgaris HOM05D001326 ORTHO05D002471 2.7e-07 60.1 52 53.8
CsaV3_3G013520 Cucumis sativus L. HOM05D001326 ORTHO05D002471 2.7e-07 60.1 52 53.8
HanXRQChr01g0030261 Helianthus annuus HOM05D001326 ORTHO05D002471 2.7e-07 60.1 64 45.3
Rhsim13G0024900 Rhododendron simsii HOM05D001326 ORTHO05D002471 2.7e-07 60.1 45 64.4
Glyma.06G293700 Glycine max HOM05D001115 ORTHO05D001023 3.6e-07 59.7 93 37.6
Ca_25914_v3 Cicer arietinum L. HOM05D001115 ORTHO05D001023 4.6e-07 59.3 90 38.9
ClCG05G005290 Citrullus lanatus HOM05D001326 ORTHO05D002471 4.6e-07 59.3 52 55.8
Thecc.01G279200 Theobroma cacao HOM05D001326 ORTHO05D002471 4.6e-07 59.3 45 64.4
TWI09G1366 Tripterygium wilfordii HOM05D001326 ORTHO05D002471 4.6e-07 59.3 49 61.2
VMungo1127G0219 Vigna mungo HOM05D001115 ORTHO05D001023 6.1e-07 58.9 88 38.6
MD16G1187900 Malus domestica HOM05D001326 ORTHO05D002471 7.9e-07 58.5 61 52.5
PGR119G0688 Punica granatum HOM05D001326 ORTHO05D002471 7.9e-07 58.5 45 64.4
Sed0014120 Sechium edule HOM05D001326 ORTHO05D002471 7.9e-07 58.5 52 57.7
Sc19g0004340 Simmondsia chinensis HOM05D001326 ORTHO05D002471 7.9e-07 58.5 49 59.2
FvH4_2g23560 Fragaria vesca HOM05D001326 ORTHO05D002471 1.0e-06 58.2 64 48.4
HanXRQChr01g0030201 Helianthus annuus HOM05D001326 ORTHO05D002471 1.0e-06 58.2 49 57.1
HanXRQChr01g0030211 Helianthus annuus HOM05D001326 ORTHO05D002471 1.0e-06 58.2 49 57.1
Lalb_Chr19g0135301 Lupinus albus HOM05D001115 ORTHO05D001023 1.0e-06 58.2 84 39.3
Manes.03G181500 Manihot esculenta HOM05D001326 ORTHO05D002471 1.0e-06 58.2 45 60.0
Phvul.011G117300 Phaseolus vulgaris HOM05D001115 ORTHO05D001023 1.0e-06 58.2 88 38.6
TAR624G0150 Trochodendron aralioides HOM05D001115 ORTHO05D001023 1.0e-06 58.2 100 38.0
Actinidia21114 Actinidia chinensis HOM05D001326 ORTHO05D002471 1.4e-06 57.8 45 62.2
MSTRG.12313 Avicennia marina HOM05D001115 ORTHO05D001023 1.4e-06 57.8 87 41.4
Haze_13146 Corylus avellana HOM05D001115 ORTHO05D001023 1.4e-06 57.8 93 39.8
FAN24G0915 Fragaria x ananassa HOM05D001326 ORTHO05D002471 1.4e-06 57.8 64 48.4
Sc13g0004180 Simmondsia chinensis HOM05D001326 ORTHO05D002471 1.4e-06 57.8 64 43.8
Atru.chr6.3006 Acer truncatum HOM05D001115 ORTHO05D001023 1.8e-06 57.4 93 37.6
Eucgr.H03559 Eucalyptus grandis HOM05D001326 ORTHO05D002471 1.8e-06 57.4 45 64.4
MD13G1187000 Malus domestica HOM05D001326 ORTHO05D002471 1.8e-06 57.4 61 50.8
QL08p038410 Quercus lobata HOM05D001115 ORTHO05D001023 1.8e-06 57.4 125 33.6
QL12p021879 Quercus lobata HOM05D001326 ORTHO05D002471 1.8e-06 57.4 45 62.2
Haze_04709 Corylus avellana HOM05D001326 ORTHO05D002471 2.3e-06 57.0 45 62.2
Duzib138G0786 Durio zibethinus HOM05D001326 ORTHO05D002471 2.3e-06 57.0 45 60.0
Prupe.8G240900 Prunus persica HOM05D001326 ORTHO05D002471 2.3e-06 57.0 64 46.9
Solyc07g054160.3 Solanum lycopersicum HOM05D001115 ORTHO05D001023 2.3e-06 57.0 96 40.6
Sopen07g028090 Solanum pennellii HOM05D001115 ORTHO05D001023 2.3e-06 57.0 96 40.6
TPR.G21758 Trifolium pratense HOM05D001115 ORTHO05D001023 3.0e-06 56.6 93 37.6
CSS0041343 Camellia sinensis var. sinensis HOM05D001326 ORTHO05D002471 3.9e-06 56.2 45 60.0
CANSAT25G0731 Cannabis sativa HOM05D001326 ORTHO05D002471 3.9e-06 56.2 53 56.6
Potri.010G091100 Populus trichocarpa HOM05D001326 ORTHO05D002471 3.9e-06 56.2 45 60.0
PGR004G0209 Punica granatum HOM05D001326 ORTHO05D002471 3.9e-06 56.2 45 57.8
Hund26907 Selenicereus undatus HOM05D001326 ORTHO05D002471 3.9e-06 56.2 52 50.0
Lj1C46G17 Lonicera japonica HOM05D001326 ORTHO05D002471 5.1e-06 55.8 53 62.3
Lj3g0023189 Lotus japonicus HOM05D001115 ORTHO05D001023 5.1e-06 55.8 96 37.5
Manes.15G026100 Manihot esculenta HOM05D001326 ORTHO05D002471 5.1e-06 55.8 52 55.8
TAR633G1687 Trochodendron aralioides HOM05D001326 ORTHO05D002471 5.1e-06 55.8 45 60.0
Actinidia24891 Actinidia chinensis HOM05D001326 ORTHO05D002471 6.7e-06 55.5 45 60.0
MSTRG.10000 Avicennia marina HOM05D001326 ORTHO05D002471 6.7e-06 55.5 103 36.9
CSS0018538 Camellia sinensis var. sinensis HOM05D001326 ORTHO05D002471 6.7e-06 55.5 45 57.8
Cc01_g19460 Coffea canephora HOM05D001326 ORTHO05D002471 6.7e-06 55.5 45 60.0
COL.COLO4_06202 Corchorus olitorius HOM05D001326 ORTHO05D002471 6.7e-06 55.5 64 50.0
Nitab4.5_0002526g0050 Nicotiana tabacum HOM05D001115 ORTHO05D001023 6.7e-06 55.5 96 38.5
Sabra10G0052100 Salix brachista HOM05D001326 ORTHO05D002471 6.7e-06 55.5 45 60.0
CiPaw.07G091800 Carya illinoinensis HOM05D001326 ORTHO05D002471 8.8e-06 55.1 57 54.4
Duzib133G0175 Durio zibethinus HOM05D001326 ORTHO05D002471 8.8e-06 55.1 45 57.8
FAN15G1939 Fragaria x ananassa HOM05D001326 ORTHO05D002471 8.8e-06 55.1 45 62.2
HanXRQChr01g0030271 Helianthus annuus HOM05D001326 ORTHO05D002471 8.8e-06 55.1 49 55.1
Potri.013G134200 Populus trichocarpa HOM05D001115 ORTHO05D001023 8.8e-06 55.1 93 39.8
TWI73G1198 Tripterygium wilfordii HOM05D001326 ORTHO05D002471 8.8e-06 55.1 45 60.0


User provided reference genes

Program Settings