Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G3701 Fragaria x ananassa HOM05D014139 ORTHO05D020686 2.2e-257 891.7 427 100.0
FvH4_3g15921 Fragaria vesca HOM05D014139 ORTHO05D020686 5.9e-255 883.6 427 99.5
FAN11G0344 Fragaria x ananassa HOM05D014139 ORTHO05D020686 1.0e-254 882.9 427 99.1
FAN21G2767 Fragaria x ananassa HOM05D014139 ORTHO05D020686 2.2e-254 881.7 427 99.3
Prupe.1G053000 Prunus persica HOM05D014139 ORTHO05D020686 4.2e-43 179.9 423 35.0
FAN12G4045 Fragaria x ananassa HOM05D017087 ORTHO05D019163 2.1e-42 177.6 395 36.2
FvH4_4g05500 Fragaria vesca HOM05D017087 ORTHO05D019163 3.6e-42 176.8 384 36.2
FvH4_7g24700 Fragaria vesca HOM05D014139 ORTHO05D046366 1.0e-41 175.3 396 35.6
FAN06G1811 Fragaria x ananassa HOM05D014139 ORTHO05D046366 1.4e-41 174.9 396 34.6
Prupe.1G052900 Prunus persica HOM05D014139 ORTHO05D020686 1.5e-40 171.4 381 35.4
FAN01G1681 Fragaria x ananassa HOM05D014139 ORTHO05D019163 9.4e-35 152.1 397 31.5
FAN12G4018 Fragaria x ananassa HOM05D017087 ORTHO05D019163 2.1e-34 151.0 307 37.8
FAN17G2437 Fragaria x ananassa HOM05D017087 ORTHO05D019163 9.7e-32 142.1 369 33.1
Hma1.2p1_0112F.1_g054880 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 3.7e-23 113.6 399 26.8
FAN07G1148 Fragaria x ananassa HOM05D017087 ORTHO05D019163 2.0e-21 107.8 203 40.4
FAN10G0490 Fragaria x ananassa HOM05D014139 ORTHO05D000074 2.0e-21 107.8 177 38.4
FvH4_4g05202 Fragaria vesca HOM05D017087 ORTHO05D019163 1.3e-20 105.1 213 37.6
QL04p019119 Quercus lobata HOM05D000151 ORTHO05D000074 1.3e-20 105.1 403 27.3
MD13G1117600 Malus domestica HOM05D000151 ORTHO05D000074 3.8e-20 103.6 452 25.9
MD13G1223500 Malus domestica HOM05D000151 ORTHO05D000074 5.5e-19 99.8 414 26.1
Prupe.1G050400 Prunus persica HOM05D000151 ORTHO05D000074 5.5e-19 99.8 412 26.5
MD16G1228400 Malus domestica HOM05D000151 ORTHO05D000074 3.6e-18 97.1 416 26.2
RcHm_v2.0_Chr4g0430571 Rosa chinensis HOM05D014495 ORTHO05D014615 3.0e-17 94.0 391 27.9
Manes.07G048850 Manihot esculenta HOM05D000151 ORTHO05D000074 4.0e-17 93.6 409 27.1
Manes.07G051600 Manihot esculenta HOM05D000151 ORTHO05D000074 5.2e-17 93.2 407 27.3
Ciclev10006417m.g Citrus clementina HOM05D000151 ORTHO05D000074 3.4e-16 90.5 416 24.8
FvH4_4g05011 Fragaria vesca HOM05D000151 ORTHO05D000074 4.4e-16 90.1 375 26.7
Manes.07G048800 Manihot esculenta HOM05D000151 ORTHO05D000074 4.4e-16 90.1 409 27.1
CANSAT25G2327 Cannabis sativa HOM05D000151 ORTHO05D000074 7.5e-16 89.4 363 26.4
CSS0038976 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 9.8e-16 89.0 414 25.4
RcHm_v2.0_Chr4g0395201 Rosa chinensis HOM05D000151 ORTHO05D000074 3.7e-15 87.0 375 26.4
TWI74G0260 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.1e-14 85.5 405 27.9
Duzib151G0485 Durio zibethinus HOM05D000151 ORTHO05D000074 4.1e-14 83.6 420 25.7
Thecc.04G266500 Theobroma cacao HOM05D000151 ORTHO05D000074 2.7e-13 80.9 403 22.3
Ciclev10006735m.g Citrus clementina HOM05D000151 ORTHO05D000074 2.3e-12 77.8 429 26.1
DCAR_013283 Daucus carota HOM05D000151 ORTHO05D000074 2.3e-12 77.8 397 26.2
FAN22G0114 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.3e-12 77.8 361 26.0
TWI09G0382 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 2.9e-12 77.4 384 24.7
Ciclev10001350m.g Citrus clementina HOM05D000151 ORTHO05D000074 6.6e-12 76.3 370 25.7
PGR031G1698 Punica granatum HOM05D000151 ORTHO05D000074 8.6e-12 75.9 372 25.8
TWI63G1822 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 8.6e-12 75.9 297 28.3
Manes.07G048900 Manihot esculenta HOM05D000151 ORTHO05D000074 1.1e-11 75.5 320 28.1
Gohir.D12G260000 Gossypium hirsutum HOM05D000151 ORTHO05D000074 1.5e-11 75.1 417 23.5
Gorai.008G278500 Gossypium raimondii HOM05D000151 ORTHO05D000074 1.9e-11 74.7 417 23.3
QL05p064445 Quercus lobata HOM05D000151 ORTHO05D000074 1.9e-11 74.7 417 24.5
TWI53G1253 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 2.5e-11 74.3 322 29.2
QL04p008960 Quercus lobata HOM05D000151 ORTHO05D000074 3.3e-11 73.9 299 26.8
QL04p009352 Quercus lobata HOM05D000151 ORTHO05D000074 7.2e-11 72.8 299 26.4
Os03g0802100 Oryza sativa ssp. japonica HOM05D000151 ORTHO05D000074 1.2e-10 72.0 409 23.2
TWI09G1230 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.2e-10 72.0 401 26.2
Gohir.A12G258800 Gossypium hirsutum HOM05D000151 ORTHO05D000074 1.6e-10 71.6 419 23.6
ClCG05G015310 Citrullus lanatus HOM05D000151 ORTHO05D000074 2.1e-10 71.2 389 25.4
CSS0028834 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 2.8e-10 70.9 383 25.1
Eucgr.F03527 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.8e-10 70.9 372 23.4
TWI56G0068 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 3.6e-10 70.5 418 23.9
TWI12G0155 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 6.1e-10 69.7 287 27.9
TAR628G1200 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.0e-09 68.9 375 24.5
Cfa014059 Carpinus fangiana HOM05D000151 ORTHO05D000074 1.4e-09 68.6 374 25.9
FvH4_3g43771 Fragaria vesca HOM05D022879 ORTHO05D000074 1.4e-09 68.6 390 23.3
FvH4_4g26320 Fragaria vesca HOM05D000151 ORTHO05D000074 1.4e-09 68.6 410 24.9
QL02p013380 Quercus lobata HOM05D000151 ORTHO05D000074 1.8e-09 68.2 376 26.3
RcHm_v2.0_Chr4g0395901 Rosa chinensis HOM05D026880 ORTHO05D029589 3.0e-09 67.4 377 23.1
TAR636G1120 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.0e-09 67.0 305 25.9
Duzib052G1217 Durio zibethinus HOM05D000151 ORTHO05D000074 5.2e-09 66.6 372 23.4
Lalb_Chr19g0133241 Lupinus albus HOM05D006368 ORTHO05D006739 5.2e-09 66.6 448 24.3
Haze_06933 Corylus avellana HOM05D000151 ORTHO05D000074 8.9e-09 65.9 433 23.8
Cfa001654 Carpinus fangiana HOM05D000151 ORTHO05D000074 1.2e-08 65.5 323 25.1
Duzib116G0495 Durio zibethinus HOM05D000151 ORTHO05D000074 1.2e-08 65.5 385 23.1
Aqoxy6G00558 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.6e-08 64.3 356 23.9
CsaV3_4G037010 Cucumis sativus L. HOM05D000151 ORTHO05D000074 3.4e-08 63.9 394 23.4
FvH4_3g40751 Fragaria vesca HOM05D019358 ORTHO05D000074 3.4e-08 63.9 285 27.4
RcHm_v2.0_Chr4g0388171 Rosa chinensis HOM05D007346 ORTHO05D009044 4.4e-08 63.5 155 28.4
Dinv27133 Davidia involucrata HOM05D000151 ORTHO05D000074 7.5e-08 62.8 358 23.5
TWI09G0953 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 9.8e-08 62.4 225 25.8
QL06p022014 Quercus lobata HOM05D000151 ORTHO05D000074 1.7e-07 61.6 216 29.2
CiPaw.07G005300 Carya illinoinensis HOM05D000151 ORTHO05D000074 2.9e-07 60.8 395 22.5
Thecc.03G224900 Theobroma cacao HOM05D000151 ORTHO05D000074 2.9e-07 60.8 263 24.3
COL.COLO4_16997 Corchorus olitorius HOM05D000151 ORTHO05D000074 3.7e-07 60.5 262 24.4
COL.COLO4_26063 Corchorus olitorius HOM05D000151 ORTHO05D000074 4.9e-07 60.1 257 26.8
Dinv04305 Davidia involucrata HOM05D000151 ORTHO05D000074 6.3e-07 59.7 281 23.1
RcHm_v2.0_Chr6g0303821 Rosa chinensis HOM05D000151 ORTHO05D000074 1.1e-06 58.9 258 27.9
FAN12G3589 Fragaria x ananassa HOM05D000151 ORTHO05D000074 9.2e-06 55.8 143 30.1


User provided reference genes

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