Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G3635 Fragaria x ananassa HOM05D007006 ORTHO05D008925 1.1e-144 516.5 257 100.0
FAN16G3644 Fragaria x ananassa HOM05D007006 ORTHO05D008925 1.1e-144 516.5 257 100.0
FvH4_3g08260 Fragaria vesca HOM05D007006 ORTHO05D008925 6.8e-89 331.3 166 98.8
FAN21G1832 Fragaria x ananassa HOM05D007006 ORTHO05D008925 7.8e-77 291.2 226 72.6
RcHm_v2.0_Chr5g0009821 Rosa chinensis HOM05D007006 ORTHO05D008925 4.0e-73 278.9 164 88.4
Eucgr.E03165 Eucalyptus grandis HOM05D007006 ORTHO05D008925 1.4e-65 253.8 185 72.4
MD10G1285600 Malus domestica HOM05D007006 ORTHO05D008925 3.1e-65 252.7 165 78.2
Prupe.4G056000 Prunus persica HOM05D007006 ORTHO05D008925 6.9e-65 251.5 138 89.9
Potri.011G062200 Populus trichocarpa HOM05D007006 ORTHO05D008925 1.5e-64 250.4 168 76.2
COL.COLO4_31384 Corchorus olitorius HOM05D007006 ORTHO05D008976 4.4e-64 248.8 179 72.1
CiPaw.10G055000 Carya illinoinensis HOM05D007006 ORTHO05D008925 9.9e-64 247.7 160 80.0
Haze_06320 Corylus avellana HOM05D007006 ORTHO05D008925 9.9e-64 247.7 154 81.8
Gohir.A10G029300 Gossypium hirsutum HOM05D007006 ORTHO05D008925 9.9e-64 247.7 171 74.3
Sabra11G0042600 Salix brachista HOM05D007006 ORTHO05D008925 1.7e-63 246.9 180 73.3
Sabra11G0044100 Salix brachista HOM05D007006 ORTHO05D008925 1.7e-63 246.9 180 73.3
Gohir.D10G029800 Gossypium hirsutum HOM05D007006 ORTHO05D008925 2.2e-63 246.5 171 73.7
Gorai.011G031700 Gossypium raimondii HOM05D007006 ORTHO05D008925 2.2e-63 246.5 171 73.7
Duzib160G0118 Durio zibethinus HOM05D007006 ORTHO05D008925 1.4e-62 243.8 169 74.0
Manes.16G034601 Manihot esculenta HOM05D007006 ORTHO05D008925 5.4e-62 241.9 197 67.0
CANSAT35G1771 Cannabis sativa HOM05D007006 ORTHO05D008925 1.6e-61 240.4 165 73.9
THA.LOC104798412 Tarenaya hassleriana HOM05D007006 ORTHO05D008925 2.1e-61 240.0 137 84.7
CsaV3_1G012640 Cucumis sativus L. HOM05D007006 ORTHO05D008925 4.6e-61 238.8 165 73.9
Thecc.06G177200 Theobroma cacao HOM05D007006 ORTHO05D008925 4.6e-61 238.8 173 73.4
MSTRG.7381 Avicennia marina HOM05D007006 ORTHO05D008925 7.8e-61 238.0 156 76.9
BraA01t00989Z Brassica rapa HOM05D007006 ORTHO05D008925 1.0e-60 237.7 141 80.9
Oeu001091.1 Olea europaea HOM05D007006 ORTHO05D008925 5.1e-60 235.3 141 83.0
Migut.M01077 Erythranthe guttata HOM05D007006 ORTHO05D008925 1.5e-59 233.8 141 83.0
BcaC09g51505 Brassica carinata HOM05D007006 ORTHO05D008925 1.9e-59 233.4 142 80.3
BolC1t01215H Brassica oleracea HOM05D007006 ORTHO05D008925 1.9e-59 233.4 142 80.3
Carub.0007s2277 Capsella rubella HOM05D007006 ORTHO05D008925 2.5e-59 233.0 141 78.7
AT4G18460 Arabidopsis thaliana HOM05D007006 ORTHO05D008925 4.3e-59 232.3 134 81.3
AL7G35820 Arabidopsis lyrata HOM05D007006 ORTHO05D008925 7.3e-59 231.5 134 80.6
Sed0005765 Sechium edule HOM05D007006 ORTHO05D008925 7.3e-59 231.5 137 81.8
Atru.chr10.1745 Acer truncatum HOM05D007006 ORTHO05D008925 9.6e-59 231.1 156 73.1
PSO210G2152 Papaver somniferum HOM05D007006 ORTHO05D008925 9.6e-59 231.1 162 71.0
Eucgr.E02654 Eucalyptus grandis HOM05D007006 ORTHO05D008925 1.3e-58 230.7 140 81.4
Thhalv10026439m.g Eutrema salsugineum HOM05D007006 ORTHO05D008925 1.3e-58 230.7 134 80.6
Sopen02g022230 Solanum pennellii HOM05D007006 ORTHO05D008925 1.6e-58 230.3 134 83.6
PGSC0003DMG400010717 Solanum tuberosum HOM05D007006 ORTHO05D008925 1.6e-58 230.3 134 83.6
TWI63G0680 Tripterygium wilfordii HOM05D007006 ORTHO05D008925 1.6e-58 230.3 137 83.2
Nn1g04307 Nelumbo nucifera HOM05D007006 ORTHO05D008925 2.1e-58 229.9 134 81.3
Solyc02g077310.4 Solanum lycopersicum HOM05D007006 ORTHO05D008925 2.1e-58 229.9 134 83.6
CSS0027125 Camellia sinensis var. sinensis HOM05D007006 ORTHO05D008925 3.6e-58 229.2 134 79.9
Actinidia07621 Actinidia chinensis HOM05D007006 ORTHO05D008925 4.8e-58 228.8 134 81.3
Aa31LG6G1200 Aethionema arabicum HOM05D007006 ORTHO05D008925 4.8e-58 228.8 152 72.4
SalBow8G1160 Salvia bowleyana HOM05D007006 ORTHO05D008925 4.8e-58 228.8 161 73.3
Nitab4.5_0011727g0040 Nicotiana tabacum HOM05D007006 ORTHO05D008925 8.1e-58 228.0 135 80.7
Cc02_g14310 Coffea canephora HOM05D007006 ORTHO05D008925 1.1e-57 227.6 133 83.5
MELO3C002631.2 Cucumis melo HOM05D007006 ORTHO05D008925 1.1e-57 227.6 189 66.1
Zm00001eb122370 Zea mays HOM05D007006 ORTHO05D008925 1.1e-57 227.6 134 81.3
Cpa.g.sc7.31 Carica papaya HOM05D007006 ORTHO05D008925 1.4e-57 227.3 160 71.9
Sp7g15560 Schrenkiella parvula HOM05D007006 ORTHO05D008925 1.4e-57 227.3 137 79.6
VMungo0540G0068 Vigna mungo HOM05D007006 ORTHO05D008925 1.4e-57 227.3 163 69.3
GSVIVG01021151001 Vitis vinifera HOM05D007006 ORTHO05D008925 1.4e-57 227.3 134 82.1
CARHR225300 Cardamine hirsuta HOM05D007006 ORTHO05D008925 1.8e-57 226.9 137 78.8
Lj6g0023400 Lotus japonicus HOM05D007006 ORTHO05D008925 1.8e-57 226.9 137 78.8
TPR.G31857 Trifolium pratense HOM05D007006 ORTHO05D008925 1.8e-57 226.9 137 79.6
TAR626G0127 Trochodendron aralioides HOM05D007006 ORTHO05D008925 1.8e-57 226.9 134 82.1
Hma1.2p1_0155F.1_g068540 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 3.1e-57 226.1 136 80.9
Nitab4.5_0000376g0100 Nicotiana tabacum HOM05D007006 ORTHO05D008925 3.1e-57 226.1 134 80.6
Dinv17375 Davidia involucrata HOM05D007006 ORTHO05D008925 4.0e-57 225.7 137 81.8
Rhsim02G0152900 Rhododendron simsii HOM05D007006 ORTHO05D008925 6.9e-57 224.9 138 80.4
arahy.Tifrunner.gnm1.ann1.PE4VQR Arachis hypogaea HOM05D000109 ORTHO05D000965 4.5e-56 222.2 152 72.4
HanXRQChr01g0008471 Helianthus annuus HOM05D007006 ORTHO05D008925 4.5e-56 222.2 134 79.1
Phvul.006G179400 Phaseolus vulgaris HOM05D007006 ORTHO05D008925 4.5e-56 222.2 141 76.6
ClCG03G007950 Citrullus lanatus HOM05D007006 ORTHO05D008925 5.8e-56 221.9 156 73.1
Os01g0242500 Oryza sativa ssp. japonica HOM05D007006 ORTHO05D008925 5.8e-56 221.9 134 79.9
Psat1g148320 Pisum sativum HOM05D007006 ORTHO05D008925 5.8e-56 221.9 141 75.9
ECA248G3223 Erigeron canadensis HOM05D007006 ORTHO05D008925 7.6e-56 221.5 134 79.9
Glyma.15G079600 Glycine max HOM05D007006 ORTHO05D008925 7.6e-56 221.5 161 68.9
BcaNung05874 Brassica carinata HOM05D007006 ORTHO05D008925 9.9e-56 221.1 141 75.2
Glyma.13G233500 Glycine max HOM05D007006 ORTHO05D008925 9.9e-56 221.1 135 79.3
ATR0602G073 Amborella trichopoda HOM05D007006 ORTHO05D008925 1.4e-54 217.2 134 80.6
Hund21193 Selenicereus undatus HOM05D007006 ORTHO05D008925 1.4e-54 217.2 145 75.2
CAN.G79.66 Capsicum annuum HOM05D007006 ORTHO05D008925 7.1e-54 214.9 134 75.4
Ca_11669_v3 Cicer arietinum L. HOM05D007006 ORTHO05D008925 1.6e-53 213.8 153 69.9
Sc05g0007280 Simmondsia chinensis HOM05D007006 ORTHO05D008925 3.5e-53 212.6 140 75.0
CDE02G4743 Ceratophyllum demersum HOM05D007006 ORTHO05D008925 7.9e-53 211.5 134 76.9
Ciclev10016962m.g Citrus clementina HOM05D007006 ORTHO05D008925 7.9e-53 211.5 124 83.1
SEGI_08558 Sequoiadendron giganteum HOM05D007006 ORTHO05D008925 3.0e-52 209.5 134 75.4
HPP92_002943 Vanilla planifolia HOM05D007006 ORTHO05D008925 1.1e-51 207.6 154 69.5
SGA_v2.0_scaffold309G48130 Striga asiatica HOM05D007006 ORTHO05D008925 5.6e-51 205.3 157 69.4
SGA_v2.0_scaffold309G48148 Striga asiatica HOM05D007006 ORTHO05D008925 7.4e-51 204.9 158 69.0
Medtr2g036040 Medicago truncatula HOM05D007006 ORTHO05D008925 1.3e-50 204.1 145 70.3
A01p10430 Brassica napus HOM05D007006 ORTHO05D008925 1.1e-49 201.1 131 74.8
Mapoly0096s0066 Marchantia polymorpha HOM05D007006 ORTHO05D008925 1.4e-49 200.7 155 64.5
Lj1A1197T80 Lonicera japonica HOM05D007006 ORTHO05D008925 6.9e-49 198.4 134 74.6
C01p12410 Brassica napus HOM05D007006 ORTHO05D008925 7.6e-48 194.9 132 72.7
SMO356G0615 Selaginella moellendorffii HOM05D007006 ORTHO05D008925 3.8e-47 192.6 154 61.0
CBR_g12914 Chara braunii HOM05D007006 ORTHO05D008925 1.9e-46 190.3 135 65.9
Pp3c2_4790 Physcomitrium patens HOM05D007006 ORTHO05D008925 3.2e-46 189.5 120 74.2
CBR_g28086 Chara braunii HOM05D007006 ORTHO05D008925 1.3e-44 184.1 134 64.9
RcHm_v2.0_Chr5g0007981 Rosa chinensis HOM05D007006 ORTHO05D008925 1.3e-44 184.1 124 79.0
Cfa000555 Carpinus fangiana HOM05D007006 ORTHO05D008925 4.3e-43 179.1 181 60.2
Lsat_1_v5_gn_1_120360 Lactuca sativa HOM05D007006 ORTHO05D008925 1.3e-42 177.6 116 72.4
Hma1.2p1_0155F.1_g068550 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 1.6e-42 177.2 134 70.1
Peaxi162Scf00875g00318 Petunia axillaris HOM05D007006 ORTHO05D008925 2.7e-37 159.8 89 80.9
AUR62031124 Chenopodium quinoa HOM05D007006 ORTHO05D008925 1.5e-35 154.1 136 61.0
EL10Ac8g20473 Beta vulgaris HOM05D007006 ORTHO05D008925 4.3e-35 152.5 152 56.6
AUR62014917 Chenopodium quinoa HOM05D007006 ORTHO05D008925 3.4e-32 142.9 134 58.2
DCAR_004029 Daucus carota HOM05D007006 ORTHO05D008925 3.8e-31 139.4 83 72.3
Cre12.g542000 Chlamydomonas reinhardtii HOM05D007006 ORTHO05D008925 5.0e-31 139.0 133 51.9
MCO06G160 Micromonas commoda HOM05D007006 ORTHO05D008925 5.5e-30 135.6 146 51.4
Lalb_Chr20g0121401 Lupinus albus HOM05D007006 ORTHO05D008925 1.9e-27 127.1 96 61.5
Haze_27122 Corylus avellana HOM05D007006 ORTHO05D008925 4.3e-27 125.9 138 42.8
PSO832G1055 Papaver somniferum HOM05D007006 ORTHO05D008925 1.6e-26 124.0 162 46.9
PRCOL_00003508 Prasinoderma coloniale HOM05D007006 ORTHO05D008925 3.1e-25 119.8 133 48.9
MBI06_g25712_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 1.0e-23 114.8 67 80.6
PGR042G2307 Punica granatum HOM05D007006 ORTHO05D008925 3.8e-23 112.8 68 76.5
CBR_g41520 Chara braunii HOM05D000019 ORTHO05D000002 3.0e-20 103.2 64 71.9
SGA_v2.0_scaffold309G48132 Striga asiatica HOM05D007006 ORTHO05D008925 3.0e-20 103.2 147 46.3
Actinidia39491 Actinidia chinensis HOM05D007006 ORTHO05D008925 9.4e-14 81.6 79 59.5
MBI06_g25714_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 4.1e-09 66.2 42 78.6


User provided reference genes

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