Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G3487 Fragaria x ananassa HOM05D005618 ORTHO05D007278 7.1e-119 430.6 221 100.0
FvH4_3g05510 Fragaria vesca HOM05D005618 ORTHO05D007278 9.3e-119 430.3 221 99.5
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 3.5e-118 428.3 221 99.5
FAN16G1298 Fragaria x ananassa HOM05D005618 ORTHO05D007278 6.0e-118 427.6 221 99.1
FAN21G3768 Fragaria x ananassa HOM05D005618 ORTHO05D007278 1.5e-116 422.9 221 98.2
RcHm_v2.0_Chr5g0014231 Rosa chinensis HOM05D005618 ORTHO05D007278 6.2e-107 391.0 224 91.5
QL05p057939 Quercus lobata HOM05D005618 ORTHO05D007278 2.1e-94 349.4 216 79.2
Dinv32254 Davidia involucrata HOM05D005618 ORTHO05D007278 6.7e-93 344.4 215 80.0
CANSAT35G0334 Cannabis sativa HOM05D005618 ORTHO05D007278 1.9e-92 342.8 219 77.6
HanXRQChr15g0480861 Helianthus annuus HOM05D005618 ORTHO05D007278 5.3e-90 334.7 217 73.3
Thecc.06G150300 Theobroma cacao HOM05D005618 ORTHO05D007278 3.4e-89 332.0 223 76.7
CiPaw.10G091700 Carya illinoinensis HOM05D005618 ORTHO05D007278 1.3e-88 330.1 215 75.8
COL.COLO4_31069 Corchorus olitorius HOM05D005618 ORTHO05D007278 1.3e-88 330.1 219 76.7
CiPaw.09G123100 Carya illinoinensis HOM05D005618 ORTHO05D007278 2.2e-88 329.3 215 74.9
Lalb_Chr09g0328651 Lupinus albus HOM05D005618 ORTHO05D007278 2.2e-88 329.3 212 76.9
Duzib192G0044 Durio zibethinus HOM05D005618 ORTHO05D007278 3.8e-88 328.6 221 76.0
CDE02G0590 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 5.0e-88 328.2 218 73.4
GSVIVG01021471001 Vitis vinifera HOM05D005618 ORTHO05D007278 5.0e-88 328.2 215 76.3
Cc00_g08440 Coffea canephora HOM05D005618 ORTHO05D007278 6.5e-88 327.8 217 76.0
Gohir.A10G041000 Gossypium hirsutum HOM05D005618 ORTHO05D007278 8.4e-88 327.4 221 74.7
Manes.15G121800 Manihot esculenta HOM05D005618 ORTHO05D007278 1.4e-87 326.6 221 73.3
PGR083G1302 Punica granatum HOM05D005618 ORTHO05D007278 1.9e-87 326.2 217 75.1
arahy.Tifrunner.gnm1.ann1.R3FQ90 Arachis hypogaea HOM05D005618 ORTHO05D007278 2.5e-87 325.9 217 72.4
TWI53G0952 Tripterygium wilfordii HOM05D005618 ORTHO05D007278 2.5e-87 325.9 217 75.1
MSTRG.7487 Avicennia marina HOM05D005618 ORTHO05D007278 5.5e-87 324.7 227 71.8
CDE06G1306 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 5.5e-87 324.7 218 73.4
arahy.Tifrunner.gnm1.ann1.LME4NB Arachis hypogaea HOM05D005618 ORTHO05D007278 9.3e-87 323.9 217 71.9
Gohir.D10G041800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 1.2e-86 323.6 221 74.2
Phvul.002G096900 Phaseolus vulgaris HOM05D005618 ORTHO05D007278 1.2e-86 323.6 217 72.8
Duzib235G0110 Durio zibethinus HOM05D005618 ORTHO05D007278 3.6e-86 322.0 223 74.4
Nn4g26571 Nelumbo nucifera HOM05D005618 ORTHO05D007278 6.1e-86 321.2 215 74.0
Migut.M00907 Erythranthe guttata HOM05D005618 ORTHO05D007278 1.0e-85 320.5 222 72.5
Lsat_1_v5_gn_7_28281 Lactuca sativa HOM05D005618 ORTHO05D007278 1.0e-85 320.5 214 72.9
Hma1.2p1_0053F.1_g030930 Hydrangea macrophylla HOM05D005618 ORTHO05D007278 1.3e-85 320.1 219 75.8
Manes.17G070300 Manihot esculenta HOM05D005618 ORTHO05D007278 1.3e-85 320.1 217 73.7
Sabra11G0068900 Salix brachista HOM05D005618 ORTHO05D007278 1.3e-85 320.1 220 72.7
Lalb_Chr05g0219641 Lupinus albus HOM05D005618 ORTHO05D007278 2.3e-85 319.3 220 72.7
Gorai.011G044400 Gossypium raimondii HOM05D005618 ORTHO05D007278 3.0e-85 318.9 224 74.1
Lj4g0005080 Lotus japonicus HOM05D005618 ORTHO05D007278 3.0e-85 318.9 217 72.8
Sabra11G0067000 Salix brachista HOM05D005618 ORTHO05D007278 3.0e-85 318.9 220 72.3
MSTRG.16244 Avicennia marina HOM05D005618 ORTHO05D007278 3.9e-85 318.5 230 68.7
Cfa000939 Carpinus fangiana HOM05D005618 ORTHO05D007278 5.1e-85 318.2 246 68.3
Gohir.A05G148300 Gossypium hirsutum HOM05D005618 ORTHO05D007278 5.1e-85 318.2 224 73.7
Sc17g0004900 Simmondsia chinensis HOM05D005618 ORTHO05D007278 5.1e-85 318.2 218 71.1
TAR626G0061 Trochodendron aralioides HOM05D005618 ORTHO05D007278 1.1e-84 317.0 217 72.8
DCAR_003916 Daucus carota HOM05D005618 ORTHO05D007278 1.5e-84 316.6 217 72.8
Potri.011G085100 Populus trichocarpa HOM05D005618 ORTHO05D007278 1.9e-84 316.2 220 72.3
Nitab4.5_0006887g0020 Nicotiana tabacum HOM05D005618 ORTHO05D007278 2.5e-84 315.8 219 72.6
THA.LOC104814300 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 4.3e-84 315.1 215 71.6
Eucgr.D00295 Eucalyptus grandis HOM05D005618 ORTHO05D007278 7.4e-84 314.3 217 72.4
Oeu052366.1 Olea europaea HOM05D005618 ORTHO05D007278 7.4e-84 314.3 238 67.2
Glyma.20G018500 Glycine max HOM05D005618 ORTHO05D007278 9.7e-84 313.9 217 70.5
CAN.G50.16 Capsicum annuum HOM05D005618 ORTHO05D007278 1.3e-83 313.5 220 71.8
SGA_v2.0_scaffold1G00178 Striga asiatica HOM05D005618 ORTHO05D007278 1.3e-83 313.5 217 72.4
Lj2A305G54 Lonicera japonica HOM05D005618 ORTHO05D007278 2.8e-83 312.4 215 72.1
AL1G43960 Arabidopsis lyrata HOM05D005618 ORTHO05D007278 3.7e-83 312.0 219 69.9
VMungo0251G3758 Vigna mungo HOM05D005618 ORTHO05D007278 3.7e-83 312.0 217 70.0
AT1G30070 Arabidopsis thaliana HOM05D005618 ORTHO05D007278 6.3e-83 311.2 219 69.9
Haze_05608 Corylus avellana HOM05D005618 ORTHO05D007278 6.3e-83 311.2 204 77.0
Thhalv10008455m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 6.3e-83 311.2 219 70.3
Oeu034148.1 Olea europaea HOM05D005618 ORTHO05D007278 6.3e-83 311.2 228 69.3
Psat7g130040 Pisum sativum HOM05D005618 ORTHO05D007278 8.2e-83 310.8 215 72.6
BcaB07g32606 Brassica carinata HOM05D005618 ORTHO05D007278 1.4e-82 310.1 219 70.3
Ca_18751_v3 Cicer arietinum L. HOM05D005618 ORTHO05D007278 1.4e-82 310.1 218 69.7
Glyma.07G220200 Glycine max HOM05D005618 ORTHO05D007278 1.4e-82 310.1 218 69.3
SalBow8G3565 Salvia bowleyana HOM05D005618 ORTHO05D007278 1.4e-82 310.1 230 68.7
Gorai.009G154900 Gossypium raimondii HOM05D005618 ORTHO05D007278 3.1e-82 308.9 224 71.9
Sp1g25930 Schrenkiella parvula HOM05D005618 ORTHO05D007278 4.1e-82 308.5 219 68.9
BcaC05g27023 Brassica carinata HOM05D005618 ORTHO05D007278 5.3e-82 308.1 219 68.5
Ciclev10016692m.g Citrus clementina HOM05D005618 ORTHO05D007278 6.9e-82 307.8 215 74.9
Gohir.D05G150800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 6.9e-82 307.8 227 70.5
PGSC0003DMG400012093 Solanum tuberosum HOM05D005618 ORTHO05D007278 6.9e-82 307.8 217 70.5
TPR.G38285 Trifolium pratense HOM05D005618 ORTHO05D007278 6.9e-82 307.8 218 70.2
A09p36460 Brassica napus HOM05D005618 ORTHO05D007278 1.5e-81 306.6 219 68.5
BraA09t39168Z Brassica rapa HOM05D005618 ORTHO05D007278 1.5e-81 306.6 219 68.5
Hund21546 Selenicereus undatus HOM05D005618 ORTHO05D007278 1.5e-81 306.6 215 70.2
C05p28860 Brassica napus HOM05D005618 ORTHO05D007278 2.6e-81 305.8 222 67.1
BolC5t31605H Brassica oleracea HOM05D005618 ORTHO05D007278 2.6e-81 305.8 218 68.3
Peaxi162Scf01211g00117 Petunia axillaris HOM05D005618 ORTHO05D007278 2.6e-81 305.8 265 61.1
Carub.0001s2829 Capsella rubella HOM05D005618 ORTHO05D007278 5.9e-81 304.7 216 69.9
TAR624G0623 Trochodendron aralioides HOM05D005618 ORTHO05D007278 7.7e-81 304.3 217 70.5
Sopen08g007080 Solanum pennellii HOM05D005618 ORTHO05D007278 1.0e-80 303.9 217 69.6
ATR0730G012 Amborella trichopoda HOM05D005618 ORTHO05D007278 1.3e-80 303.5 215 70.2
MD05G1283600 Malus domestica HOM05D005618 ORTHO05D007278 2.2e-80 302.8 209 74.6
Solyc08g016670.3 Solanum lycopersicum HOM05D005618 ORTHO05D007278 6.5e-80 301.2 217 68.7
THA.LOC104820649 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 8.5e-80 300.8 215 70.7
Aa31LG6G5600 Aethionema arabicum HOM05D005618 ORTHO05D007278 1.1e-79 300.4 229 65.9
SGA_v2.0_scaffold333G48991 Striga asiatica HOM05D005618 ORTHO05D007278 1.4e-79 300.1 223 69.5
ECA236G2996 Erigeron canadensis HOM05D005618 ORTHO05D007278 2.5e-79 299.3 224 67.4
MELO3C002736.2 Cucumis melo HOM05D005618 ORTHO05D007278 2.1e-78 296.2 216 69.4
ClCG03G006840 Citrullus lanatus HOM05D005618 ORTHO05D007278 2.7e-78 295.8 219 69.4
AUR62030187 Chenopodium quinoa HOM05D005618 ORTHO05D007278 7.9e-78 294.3 218 68.8
Aqoxy1G01706 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 1.4e-77 293.5 223 68.6
AUR62002738 Chenopodium quinoa HOM05D005618 ORTHO05D007278 1.4e-77 293.5 219 68.9
CARHR029340 Cardamine hirsuta HOM05D005618 ORTHO05D007278 1.8e-77 293.1 219 67.1
Sed0020286 Sechium edule HOM05D005618 ORTHO05D007278 3.9e-77 292.0 218 68.3
vmacro10962 Vaccinium macrocarpon HOM05D005618 ORTHO05D007278 6.7e-77 291.2 258 62.8
CsaV3_1G032420 Cucumis sativus L. HOM05D005618 ORTHO05D007278 8.8e-77 290.8 216 67.6
PSO675G5881 Papaver somniferum HOM05D005618 ORTHO05D007278 2.6e-76 289.3 243 63.8
HPP92_020290 Vanilla planifolia HOM05D005618 ORTHO05D007278 9.7e-76 287.3 222 64.0
MD10G1261800 Malus domestica HOM05D005618 ORTHO05D007278 3.1e-74 282.3 209 71.3
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 2.6e-73 279.3 204 67.2
Os01g0757500 Oryza sativa ssp. japonica HOM05D005618 ORTHO05D007278 2.6e-73 279.3 221 62.0
Ah.09g232560 Amaranthus hybridus HOM05D005618 ORTHO05D007278 1.3e-72 276.9 251 61.0
MBI10_g30420_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 1.7e-72 276.6 186 72.0
CSS0012983 Camellia sinensis var. sinensis HOM05D005618 ORTHO05D007278 2.2e-72 276.2 161 81.4
Zm00001eb370650 Zea mays HOM05D005618 ORTHO05D007278 2.9e-72 275.8 219 60.7
Actinidia39574 Actinidia chinensis HOM05D005618 ORTHO05D007278 1.1e-71 273.9 158 82.3
Nitab4.5_0000420g0030 Nicotiana tabacum HOM05D005618 ORTHO05D007278 1.9e-71 273.1 215 67.4
Zm00001eb152680 Zea mays HOM05D005618 ORTHO05D007278 2.5e-71 272.7 215 63.3
SEGI_02039 Sequoiadendron giganteum HOM05D005618 ORTHO05D007278 6.7e-69 264.6 216 61.1
Medtr4g084250 Medicago truncatula HOM05D005618 ORTHO05D007278 6.3e-67 258.1 220 61.8
Nn3g20783 Nelumbo nucifera HOM05D005618 ORTHO05D007278 1.1e-66 257.3 185 69.2
AUR62026670 Chenopodium quinoa HOM05D005618 ORTHO05D007278 1.6e-62 243.4 219 61.2
Rhsim02G0158200 Rhododendron simsii HOM05D005618 ORTHO05D007278 6.7e-61 238.0 189 66.1
Mapoly0148s0015 Marchantia polymorpha HOM05D005618 ORTHO05D007278 3.7e-59 232.3 239 49.8
Thhalv10002717m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 1.0e-56 224.2 132 78.0
Cpa.g.c46789 Carica papaya HOM05D005618 ORTHO05D007278 9.4e-55 217.6 123 82.1
Pp3c4_13920 Physcomitrium patens HOM05D005618 ORTHO05D007278 3.6e-54 215.7 210 53.8
Actinidia07695 Actinidia chinensis HOM05D005618 ORTHO05D007278 3.7e-51 205.7 220 54.5
Prupe.4G081000 Prunus persica HOM05D005618 ORTHO05D007278 7.0e-50 201.4 233 49.4
unitig_32.g11444 Utricularia gibba HOM05D005618 ORTHO05D007278 1.0e-48 197.6 115 80.0
AagrBONN_evm.TU.Sc2ySwM_344.1819 Anthoceros agrestis HOM05D005618 ORTHO05D007278 4.2e-47 192.2 241 45.2
SMO364G0114 Selaginella moellendorffii HOM05D005618 ORTHO05D007278 3.6e-46 189.1 205 49.3
AUR62040575 Chenopodium quinoa HOM05D005618 ORTHO05D007278 1.7e-40 170.2 172 55.2
MBI16_g34289_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 1.8e-37 160.2 100 75.0
CBR_g22260 Chara braunii HOM05D005618 ORTHO05D007278 1.3e-35 154.1 256 35.9
SHI24907 Sapria himalayana HOM05D005618 ORTHO05D007278 3.3e-31 139.4 178 46.1
PSO541G3455 Papaver somniferum HOM05D005618 ORTHO05D007278 1.2e-28 131.0 246 38.6
MBI18_g05573_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 5.2e-13 79.0 43 81.4
SHI24908 Sapria himalayana HOM05D005618 ORTHO05D007278 1.2e-12 77.8 84 56.0
Aqoxy7G01552 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 1.2e-09 67.8 38 78.9
SMO353G0169 Selaginella moellendorffii HOM05D005618 ORTHO05D001361 3.5e-09 66.2 38 76.3
MBI18_g05572_MAGBIO Magnolia biondii HOM05D004967 ORTHO05D006146 1.3e-08 64.3 43 67.4
Lj2A178T48 Lonicera japonica HOM05D001916 ORTHO05D003272 3.3e-07 59.7 166 24.7
Medtr5g009930 Medicago truncatula HOM05D001916 ORTHO05D003272 4.3e-07 59.3 201 24.4
LjContig00312_ERROPOS870357g0000946 Lotus japonicus HOM05D001916 ORTHO05D003272 5.6e-07 58.9 179 24.6
SMO364G0864 Selaginella moellendorffii HOM05D005618 ORTHO05D374196 5.6e-07 58.9 44 63.6
VMungo1215G1038 Vigna mungo HOM05D001916 ORTHO05D003272 5.6e-07 58.9 162 24.7
Thhalv10028764m.g Eutrema salsugineum HOM05D001916 ORTHO05D003272 1.2e-06 57.8 206 25.7
TPR.G6657 Trifolium pratense HOM05D001916 ORTHO05D003272 1.2e-06 57.8 184 24.5
Ca_24534_v3 Cicer arietinum L. HOM05D001916 ORTHO05D003272 1.6e-06 57.4 162 25.3
unitig_0.g2466 Utricularia gibba HOM05D001916 ORTHO05D003272 1.6e-06 57.4 210 25.7
AT1G30060 Arabidopsis thaliana HOM05D008497 ORTHO05D003355 2.1e-06 57.0 28 89.3
RcHm_v2.0_Chr1g0378891 Rosa chinensis HOM05D001916 ORTHO05D003272 2.1e-06 57.0 229 24.5
Phvul.002G160300 Phaseolus vulgaris HOM05D001916 ORTHO05D003272 4.7e-06 55.8 162 22.2
QL10p020720 Quercus lobata HOM05D005618 ORTHO05D337099 4.7e-06 55.8 35 77.1
BraA03t12130Z Brassica rapa HOM05D001916 ORTHO05D003272 6.2e-06 55.5 202 22.8
Haze_08751 Corylus avellana HOM05D001916 ORTHO05D003272 6.2e-06 55.5 163 25.2


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