Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 6.0e-155 550.8 284 100.0
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 1.1e-153 546.6 283 99.3
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 6.1e-147 524.2 283 96.1
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 1.8e-143 512.7 292 92.8
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 1.0e-125 453.8 292 84.2
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 1.3e-117 426.8 288 81.2
FvH4_3g45910 Fragaria vesca HOM05D006633 ORTHO05D008259 1.8e-111 406.4 214 99.1
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 3.4e-105 385.6 295 71.5
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 4.5e-102 375.2 292 68.5
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 5.9e-102 374.8 299 70.2
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 1.0e-101 374.0 292 67.8
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 7.2e-100 367.9 239 76.6
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 1.2e-99 367.1 304 66.4
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 6.1e-99 364.8 209 85.6
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 8.0e-99 364.4 298 67.8
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 4.0e-98 362.1 281 68.3
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 1.5e-97 360.1 209 84.7
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 2.0e-97 359.8 250 72.4
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 3.4e-97 359.0 213 83.1
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 4.4e-97 358.6 301 67.8
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 1.3e-96 357.1 280 68.2
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 2.2e-96 356.3 221 79.6
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 2.4e-95 352.8 224 78.1
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 4.1e-95 352.1 248 70.6
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 5.4e-95 351.7 213 80.3
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 1.6e-94 350.1 286 65.4
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 2.7e-94 349.4 249 71.1
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 2.7e-94 349.4 280 68.2
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 3.5e-94 349.0 249 71.1
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 3.5e-94 349.0 303 62.0
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 4.6e-94 348.6 231 75.8
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 5.9e-94 348.2 299 64.5
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 7.8e-94 347.8 204 83.8
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 1.7e-93 346.7 284 67.6
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 3.0e-93 345.9 300 62.3
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 1.1e-92 344.0 271 67.9
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 2.5e-92 342.8 208 80.8
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 5.6e-92 341.7 284 66.5
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 9.5e-92 340.9 208 80.3
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 6.2e-91 338.2 239 70.7
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 8.0e-91 337.8 282 66.3
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 8.0e-91 337.8 278 66.5
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 1.4e-90 337.0 286 64.3
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 4.0e-90 335.5 272 66.5
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 1.5e-89 333.6 272 65.8
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 2.0e-89 333.2 297 62.6
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 2.0e-89 333.2 274 66.1
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 4.4e-89 332.0 241 69.3
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 1.7e-88 330.1 270 67.8
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 2.9e-88 329.3 273 65.9
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 4.9e-88 328.6 235 72.3
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 1.4e-87 327.0 279 63.1
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 2.0e-86 323.2 284 64.4
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 3.5e-86 322.4 293 62.8
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 4.6e-86 322.0 281 62.6
Haze_22925 Corylus avellana HOM05D006633 ORTHO05D008259 4.6e-86 322.0 221 75.1
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 7.8e-86 321.2 270 63.3
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 1.0e-85 320.9 280 62.5
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 1.0e-85 320.9 281 65.1
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 1.7e-85 320.1 286 62.6
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 2.3e-85 319.7 268 63.8
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 2.3e-85 319.7 270 64.1
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 3.0e-85 319.3 281 61.2
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 3.9e-85 318.9 268 63.8
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 3.9e-85 318.9 289 63.7
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 5.0e-85 318.5 272 63.2
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 6.6e-85 318.2 278 61.9
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 8.6e-85 317.8 265 64.9
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 8.6e-85 317.8 278 62.2
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 8.6e-85 317.8 265 64.9
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 8.6e-85 317.8 268 64.6
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 1.1e-84 317.4 265 64.9
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 1.5e-84 317.0 265 64.9
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 1.5e-84 317.0 265 64.5
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 2.5e-84 316.2 228 69.3
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 1.6e-83 313.5 287 62.0
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 8.1e-83 311.2 294 59.9
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 8.9e-82 307.8 282 60.3
DCAR_001964 Daucus carota HOM05D006633 ORTHO05D008259 2.2e-80 303.1 297 58.6
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 3.7e-80 302.4 271 61.6
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 1.6e-78 297.0 288 60.1
FAN25G3644 Fragaria x ananassa HOM05D006633 ORTHO05D008259 4.6e-78 295.4 226 70.8
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 5.6e-76 288.5 216 64.4
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 1.6e-75 287.0 207 70.5
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 3.6e-75 285.8 273 57.1
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 1.5e-73 280.4 195 68.7
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 5.8e-73 278.5 197 71.6
BcaC06g32753 Brassica carinata HOM05D006633 ORTHO05D008259 2.4e-71 273.1 198 71.7
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 3.2e-71 272.7 252 62.7
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 4.1e-71 272.3 197 70.6
arahy.Tifrunner.gnm1.ann1.UCUG5X Arachis hypogaea HOM05D006633 ORTHO05D008259 7.1e-71 271.6 278 55.4
TPR.G34055 Trifolium pratense HOM05D006633 ORTHO05D008259 1.0e-69 267.7 180 75.6
Sc22g0000060 Simmondsia chinensis HOM05D006633 ORTHO05D008259 1.3e-69 267.3 185 69.2
Medtr4g083370 Medicago truncatula HOM05D006633 ORTHO05D008259 1.1e-68 264.2 271 58.7
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 3.1e-66 256.1 173 71.7
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 1.2e-65 254.2 249 55.8
Hma1.2p1_2123F.1_g314533 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 4.4e-57 225.7 148 75.7
Thhalv10026040m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 1.7e-56 223.8 220 58.2
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 7.4e-52 208.4 195 54.9
vmacro04274 Vaccinium macrocarpon HOM05D006633 ORTHO05D008259 5.1e-45 185.7 151 62.9
CSS0002459 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 1.3e-40 171.0 95 83.2
SMO228G0116 Selaginella moellendorffii HOM05D006633 ORTHO05D008259 1.6e-38 164.1 195 44.1
ClCG02G024430 Citrullus lanatus HOM05D006633 ORTHO05D008259 3.3e-36 156.4 103 72.8
CSS0031986 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 2.1e-35 153.7 161 54.7
Pp3c10_23950 Physcomitrium patens HOM05D006633 ORTHO05D008259 1.4e-34 151.0 199 41.2
Hund09324 Selenicereus undatus HOM05D006633 ORTHO05D008259 5.0e-32 142.5 82 80.5
Zm00001eb218200 Zea mays HOM05D006633 ORTHO05D008259 5.0e-32 142.5 109 63.3
Mapoly0006s0155 Marchantia polymorpha HOM05D006633 ORTHO05D008259 1.3e-27 127.9 212 34.9
EL10Ac9g21929 Beta vulgaris HOM05D006633 ORTHO05D008259 4.8e-27 125.9 168 48.8
AUR62016367 Chenopodium quinoa HOM05D006633 ORTHO05D008259 1.2e-25 121.3 91 65.9
Hma1.2p1_1877F.1_g306330 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 7.7e-25 118.6 129 56.6
HanXRQChr15g0489901 Helianthus annuus HOM05D006633 ORTHO05D008259 2.2e-24 117.1 77 75.3
HanXRQChr11g0336181 Helianthus annuus HOM05D006633 ORTHO05D008259 3.3e-20 103.2 70 75.7
CDE10G1061 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 4.8e-19 99.4 68 70.6
SEGI_24744 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 1.1e-18 98.2 59 72.9
COL.COLO4_37952 Corchorus olitorius HOM05D006633 ORTHO05D008259 4.1e-18 96.3 58 79.3
HanXRQChr02g0032931 Helianthus annuus HOM05D006633 ORTHO05D008259 1.3e-16 91.3 55 80.0
CDE10G0014 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 1.6e-14 84.3 128 46.9
SEGI_20653 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 7.2e-07 58.9 146 33.6
AagrBONN_evm.TU.Sc2ySwM_117.296 Anthoceros agrestis HOM05D006633 ORTHO05D008259 3.6e-06 56.6 92 39.1


User provided reference genes

Program Settings