Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G3125 Fragaria x ananassa HOM05D010503 ORTHO05D022602 2.2e-148 528.9 257 100.0
FAN21G1560 Fragaria x ananassa HOM05D010503 ORTHO05D022602 3.5e-93 345.5 238 74.8
FvH4_3g45051 Fragaria vesca HOM05D010503 ORTHO05D035703 3.6e-90 335.5 214 78.0
FvH4_3g45040 Fragaria vesca HOM05D010503 ORTHO05D035703 3.4e-80 302.4 249 62.2
FAN11G1665 Fragaria x ananassa HOM05D010503 ORTHO05D035703 4.4e-80 302.0 249 62.2
FvH4_3g45020 Fragaria vesca HOM05D010503 ORTHO05D022602 9.8e-80 300.8 150 98.0
FAN25G3542 Fragaria x ananassa HOM05D010503 ORTHO05D022602 1.2e-69 267.3 225 61.8
FAN21G3807 Fragaria x ananassa HOM05D010503 ORTHO05D022602 2.4e-49 199.9 123 78.9
FvH4_5g09850 Fragaria vesca HOM05D010503 ORTHO05D025357 1.2e-48 197.6 245 46.9
FAN12G1570 Fragaria x ananassa HOM05D010503 ORTHO05D025357 5.5e-46 188.7 240 47.1
FAN08G1148 Fragaria x ananassa HOM05D010503 ORTHO05D025357 1.1e-41 174.5 242 44.2
FAN08G1136 Fragaria x ananassa HOM05D010503 ORTHO05D025357 1.7e-31 140.6 190 44.7
FAN21G2812 Fragaria x ananassa HOM05D010503 ORTHO05D017963 1.0e-28 131.3 250 36.4
FvH4_5g09840 Fragaria vesca HOM05D010503 ORTHO05D017963 3.0e-28 129.8 248 37.1
RcHm_v2.0_Chr5g0082901 Rosa chinensis HOM05D010503 ORTHO05D022602 5.1e-28 129.0 114 56.1
FAN08G2932 Fragaria x ananassa HOM05D010503 ORTHO05D017963 4.3e-27 125.9 247 35.6
FAN08G3287 Fragaria x ananassa HOM05D010503 ORTHO05D017963 4.3e-27 125.9 247 35.6
FvH4_4g08081 Fragaria vesca HOM05D010503 ORTHO05D025357 4.1e-25 119.4 228 35.5
RcHm_v2.0_Chr7g0191221 Rosa chinensis HOM05D006854 ORTHO05D011215 2.3e-20 103.6 212 35.8
FvH4_5g04834 Fragaria vesca HOM05D006854 ORTHO05D029389 3.0e-20 103.2 196 37.8
RcHm_v2.0_Chr0c11g0499451 Rosa chinensis HOM05D006854 ORTHO05D000038 1.3e-18 97.8 210 31.9
RcHm_v2.0_Chr7g0236181 Rosa chinensis HOM05D006854 ORTHO05D000038 2.2e-18 97.1 212 31.1
FvH4_6g41381 Fragaria vesca HOM05D006854 ORTHO05D035430 3.7e-18 96.3 204 34.8
FAN18G0896 Fragaria x ananassa HOM05D006854 ORTHO05D011215 1.8e-17 94.0 198 30.3
FvH4_5g06850 Fragaria vesca HOM05D006854 ORTHO05D011215 4.1e-17 92.8 180 38.3
RcHm_v2.0_Chr4g0410881 Rosa chinensis HOM05D006854 ORTHO05D046355 2.0e-16 90.5 254 28.3
RcHm_v2.0_Chr7g0191591 Rosa chinensis HOM05D006854 ORTHO05D011215 2.0e-16 90.5 196 35.2
RcHm_v2.0_Chr7g0189311 Rosa chinensis HOM05D000082 ORTHO05D000038 4.5e-16 89.4 129 43.4
FvH4_5g08080 Fragaria vesca HOM05D006854 ORTHO05D011215 5.9e-16 89.0 221 29.4
RcHm_v2.0_Chr7g0194301 Rosa chinensis HOM05D006854 ORTHO05D022664 7.7e-16 88.6 288 30.6
FAN18G3526 Fragaria x ananassa HOM05D006854 ORTHO05D210570 1.0e-15 88.2 205 34.1
FAN13G0959 Fragaria x ananassa HOM05D006854 ORTHO05D029560 1.7e-15 87.4 194 35.1
FAN08G0245 Fragaria x ananassa HOM05D006854 ORTHO05D011215 2.2e-15 87.0 195 30.8
FvH4_5g08121 Fragaria vesca HOM05D006854 ORTHO05D011215 6.5e-15 85.5 163 35.0
FvH4_5g09910 Fragaria vesca HOM05D006854 ORTHO05D046355 6.5e-15 85.5 251 29.5
RcHm_v2.0_Chr6g0255331 Rosa chinensis HOM05D006854 ORTHO05D029561 6.5e-15 85.5 154 38.3
FvH4_5g04830 Fragaria vesca HOM05D006854 ORTHO05D022664 1.1e-14 84.7 247 31.2
FAN18G4459 Fragaria x ananassa HOM05D006854 ORTHO05D000038 1.1e-14 84.7 146 35.6
FAN08G0630 Fragaria x ananassa HOM05D006854 ORTHO05D029560 2.5e-14 83.6 117 46.2
FvH4_5g04833 Fragaria vesca HOM05D006854 ORTHO05D029560 3.2e-14 83.2 201 34.8
FAN04G2532 Fragaria x ananassa HOM05D006854 ORTHO05D022664 3.2e-14 83.2 249 31.3
FAN08G3474 Fragaria x ananassa HOM05D006854 ORTHO05D022664 3.2e-14 83.2 249 31.7
FvH4_5g04821 Fragaria vesca HOM05D006854 ORTHO05D022664 9.4e-14 81.6 252 32.1
FAN08G2487 Fragaria x ananassa HOM05D006854 ORTHO05D029560 1.6e-13 80.9 108 44.4
FAN13G1691 Fragaria x ananassa HOM05D006854 ORTHO05D022664 1.6e-13 80.9 249 31.3
FAN18G3954 Fragaria x ananassa HOM05D006854 ORTHO05D011215 1.6e-13 80.9 131 42.7
FAN25G2639 Fragaria x ananassa HOM05D010503 ORTHO05D017963 1.6e-13 80.9 144 38.2
FvH4_5g06960 Fragaria vesca HOM05D006854 ORTHO05D011215 2.1e-13 80.5 219 32.4
FAN08G2196 Fragaria x ananassa HOM05D006854 ORTHO05D011215 2.1e-13 80.5 187 32.6
RcHm_v2.0_Chr6g0269041 Rosa chinensis HOM05D006854 ORTHO05D000038 2.1e-13 80.5 226 31.0
FvH4_4g04731 Fragaria vesca HOM05D010503 ORTHO05D197754 2.7e-13 80.1 100 45.0
FAN18G1761 Fragaria x ananassa HOM05D006854 ORTHO05D011215 2.7e-13 80.1 136 38.2
FvH4_5g07200 Fragaria vesca HOM05D006854 ORTHO05D011215 1.0e-12 78.2 216 31.9
FAN18G1646 Fragaria x ananassa HOM05D006854 ORTHO05D011215 1.4e-12 77.8 157 30.6
FvH4_5g06931 Fragaria vesca HOM05D006854 ORTHO05D011215 1.8e-12 77.4 176 33.5
FAN18G1607 Fragaria x ananassa HOM05D000082 ORTHO05D000038 1.8e-12 77.4 129 38.0
RcHm_v2.0_Chr1g0314791 Rosa chinensis HOM05D000082 ORTHO05D000038 1.8e-12 77.4 199 31.2
RcHm_v2.0_Chr3g0484371 Rosa chinensis HOM05D009507 ORTHO05D000038 1.8e-12 77.4 162 34.0
FvH4_5g04570 Fragaria vesca HOM05D000082 ORTHO05D000038 3.0e-12 76.6 133 37.6
FvH4_5g06910 Fragaria vesca HOM05D006854 ORTHO05D011215 3.0e-12 76.6 210 30.5
FAN13G1069 Fragaria x ananassa HOM05D006854 ORTHO05D011215 1.1e-11 74.7 196 29.1
FvH4_2g05200 Fragaria vesca HOM05D041790 ORTHO05D029561 1.5e-11 74.3 185 29.2
FvH4_6g41383 Fragaria vesca HOM05D006854 ORTHO05D000038 1.5e-11 74.3 126 35.7
FAN13G1373 Fragaria x ananassa HOM05D006854 ORTHO05D011215 2.0e-11 73.9 147 35.4
RcHm_v2.0_Chr1g0340221 Rosa chinensis HOM05D006854 ORTHO05D000038 3.3e-11 73.2 139 35.3
RcHm_v2.0_Chr7g0194201 Rosa chinensis HOM05D006854 ORTHO05D000038 3.3e-11 73.2 128 35.9
FvH4_5g09630 Fragaria vesca HOM05D006854 ORTHO05D011215 4.4e-11 72.8 124 37.1
FAN04G0586 Fragaria x ananassa HOM05D006854 ORTHO05D011215 4.4e-11 72.8 123 37.4
FAN18G1262 Fragaria x ananassa HOM05D006854 ORTHO05D011215 4.4e-11 72.8 124 37.1
FvH4_4g33620 Fragaria vesca HOM05D000082 ORTHO05D000038 5.7e-11 72.4 141 30.5
FAN17G1531 Fragaria x ananassa HOM05D000454 ORTHO05D007581 5.7e-11 72.4 126 34.1
FvH4_1g21520 Fragaria vesca HOM05D006854 ORTHO05D011215 7.4e-11 72.0 104 37.5
FAN19G1045 Fragaria x ananassa HOM05D006854 ORTHO05D011215 7.4e-11 72.0 104 37.5
FvH4_6g52331 Fragaria vesca HOM05D000082 ORTHO05D000038 3.7e-10 69.7 170 32.4
FvH4_6g52340 Fragaria vesca HOM05D000082 ORTHO05D000038 3.7e-10 69.7 170 32.4
RcHm_v2.0_Chr2g0173941 Rosa chinensis HOM05D000082 ORTHO05D000038 3.7e-10 69.7 171 30.4
RcHm_v2.0_Chr7g0190371 Rosa chinensis HOM05D006854 ORTHO05D011215 3.7e-10 69.7 142 34.5
FvH4_5g05590 Fragaria vesca HOM05D000082 ORTHO05D035430 8.2e-10 68.6 148 35.8
RcHm_v2.0_Chr4g0440431 Rosa chinensis HOM05D000082 ORTHO05D000038 8.2e-10 68.6 128 35.9
FAN14G1611 Fragaria x ananassa HOM05D000082 ORTHO05D000038 2.4e-09 67.0 197 27.9
FvH4_4g33600 Fragaria vesca HOM05D000082 ORTHO05D000038 3.1e-09 66.6 125 39.2
FAN09G0052 Fragaria x ananassa HOM05D000082 ORTHO05D000038 3.1e-09 66.6 196 28.1
RcHm_v2.0_Chr4g0440501 Rosa chinensis HOM05D000082 ORTHO05D000038 3.1e-09 66.6 157 31.8
FAN02G2769 Fragaria x ananassa HOM05D019279 ORTHO05D029510 5.3e-09 65.9 158 32.3
Prupe.8G048800 Prunus persica HOM05D000082 ORTHO05D000038 5.3e-09 65.9 208 27.4
FAN02G0518 Fragaria x ananassa HOM05D000082 ORTHO05D000038 7.0e-09 65.5 167 31.1
FAN12G4197 Fragaria x ananassa HOM05D005814 ORTHO05D006821 7.0e-09 65.5 143 35.0
FvH4_1g21510 Fragaria vesca HOM05D000500 ORTHO05D000367 9.1e-09 65.1 115 35.7
FAN05G4846 Fragaria x ananassa HOM05D000082 ORTHO05D000038 9.1e-09 65.1 197 27.4
FAN23G0565 Fragaria x ananassa HOM05D006854 ORTHO05D011215 1.6e-08 64.3 104 35.6
Psat5g087280 Pisum sativum HOM05D000082 ORTHO05D000038 1.6e-08 64.3 90 34.4
FvH4_6g06910 Fragaria vesca HOM05D000082 ORTHO05D000038 2.0e-08 63.9 197 26.9
FvH4_6g51740 Fragaria vesca HOM05D019279 ORTHO05D029510 2.0e-08 63.9 158 32.3
RcHm_v2.0_Chr6g0306361 Rosa chinensis HOM05D009507 ORTHO05D016294 2.0e-08 63.9 157 31.2
FvH4_6g50650 Fragaria vesca HOM05D000082 ORTHO05D000038 2.6e-08 63.5 229 24.9
FAN19G0565 Fragaria x ananassa HOM05D006854 ORTHO05D011215 2.6e-08 63.5 114 35.1
FAN13G3143 Fragaria x ananassa HOM05D006854 ORTHO05D029383 3.5e-08 63.2 132 34.8
FAN27G1660 Fragaria x ananassa HOM05D041790 ORTHO05D029561 3.5e-08 63.2 142 32.4
RcHm_v2.0_Chr2g0172771 Rosa chinensis HOM05D000082 ORTHO05D000038 3.5e-08 63.2 177 27.7
FvH4_1g17310 Fragaria vesca HOM05D000082 ORTHO05D000038 4.5e-08 62.8 178 29.8
FvH4_5g06150 Fragaria vesca HOM05D006854 ORTHO05D029383 4.5e-08 62.8 132 34.1
FAN09G3574 Fragaria x ananassa HOM05D019279 ORTHO05D029510 4.5e-08 62.8 158 32.3
FAN09G4737 Fragaria x ananassa HOM05D019279 ORTHO05D029510 4.5e-08 62.8 158 32.3
FAN19G2743 Fragaria x ananassa HOM05D000082 ORTHO05D000038 4.5e-08 62.8 178 29.8
RcHm_v2.0_Chr3g0488411 Rosa chinensis HOM05D000082 ORTHO05D000038 4.5e-08 62.8 201 26.9
FAN12G0007 Fragaria x ananassa HOM05D006854 ORTHO05D011215 5.9e-08 62.4 109 38.5
FAN24G0871 Fragaria x ananassa HOM05D004879 ORTHO05D000038 5.9e-08 62.4 160 28.1
FAN26G2829 Fragaria x ananassa HOM05D000082 ORTHO05D000038 5.9e-08 62.4 178 29.8
FvH4_4g31810 Fragaria vesca HOM05D000082 ORTHO05D000038 7.7e-08 62.0 143 34.3
Medtr3g088080 Medicago truncatula HOM05D000082 ORTHO05D000038 7.7e-08 62.0 90 36.7
FvH4_2g01521 Fragaria vesca HOM05D004879 ORTHO05D000038 1.0e-07 61.6 80 41.2
FAN27G0319 Fragaria x ananassa HOM05D004879 ORTHO05D000038 1.0e-07 61.6 77 41.6
FvH4_2g01040 Fragaria vesca HOM05D004879 ORTHO05D000038 1.3e-07 61.2 160 27.5
FAN08G1857 Fragaria x ananassa HOM05D037753 ORTHO05D035757 1.3e-07 61.2 137 29.2
FAN02G2940 Fragaria x ananassa HOM05D000082 ORTHO05D000038 1.7e-07 60.8 86 39.5
FvH4_2g05410 Fragaria vesca HOM05D009790 ORTHO05D000038 2.2e-07 60.5 192 27.6
FvH4_6g31360 Fragaria vesca HOM05D034923 ORTHO05D045513 2.2e-07 60.5 139 33.8
FAN12G2874 Fragaria x ananassa HOM05D006854 ORTHO05D011215 2.2e-07 60.5 109 38.5
FvH4_2g01511 Fragaria vesca HOM05D004879 ORTHO05D045554 2.9e-07 60.1 80 40.0
FAN18G3992 Fragaria x ananassa HOM05D006854 ORTHO05D029383 2.9e-07 60.1 132 34.1
FAN22G1986 Fragaria x ananassa HOM05D000082 ORTHO05D000038 2.9e-07 60.1 124 34.7
FAN24G0888 Fragaria x ananassa HOM05D004879 ORTHO05D045554 2.9e-07 60.1 80 40.0
FvH4_6g52350 Fragaria vesca HOM05D000082 ORTHO05D045928 3.8e-07 59.7 135 33.3
FvH4_6g52530 Fragaria vesca HOM05D000082 ORTHO05D000038 3.8e-07 59.7 164 31.7
FAN14G0436 Fragaria x ananassa HOM05D000082 ORTHO05D000038 3.8e-07 59.7 164 32.3
RcHm_v2.0_Chr7g0194401 Rosa chinensis HOM05D000082 ORTHO05D000038 3.8e-07 59.7 98 35.7
RcHm_v2.0_Chr1g0362121 Rosa chinensis HOM05D000082 ORTHO05D000038 6.5e-07 58.9 87 36.8
FAN24G3181 Fragaria x ananassa HOM05D004879 ORTHO05D008271 8.5e-07 58.5 169 27.2
FAN20G2315 Fragaria x ananassa HOM05D004879 ORTHO05D000038 1.1e-06 58.2 173 26.6
RcHm_v2.0_Chr3g0464271 Rosa chinensis HOM05D006854 ORTHO05D025449 1.1e-06 58.2 208 28.4
Prupe.6G084800 Prunus persica HOM05D000082 ORTHO05D000038 1.5e-06 57.8 213 28.6
FvH4_6g44500 Fragaria vesca HOM05D000082 ORTHO05D000038 1.9e-06 57.4 164 28.0
FAN05G4614 Fragaria x ananassa HOM05D000082 ORTHO05D000038 1.9e-06 57.4 137 32.1
RcHm_v2.0_Chr2g0107491 Rosa chinensis HOM05D000082 ORTHO05D000038 1.9e-06 57.4 151 30.5
RcHm_v2.0_Chr3g0486241 Rosa chinensis HOM05D000082 ORTHO05D000038 1.9e-06 57.4 154 28.6
FvH4_2g00500 Fragaria vesca HOM05D004879 ORTHO05D000038 2.5e-06 57.0 170 26.5
FvH4_2g00510 Fragaria vesca HOM05D004879 ORTHO05D000038 2.5e-06 57.0 85 37.6
FAN05G4343 Fragaria x ananassa HOM05D000082 ORTHO05D000038 2.5e-06 57.0 190 28.9
FAN15G2865 Fragaria x ananassa HOM05D004879 ORTHO05D000038 2.5e-06 57.0 206 26.7
FvH4_3g37402 Fragaria vesca HOM05D004879 ORTHO05D029626 3.2e-06 56.6 160 29.4
FvH4_4g33580 Fragaria vesca HOM05D000082 ORTHO05D000038 3.2e-06 56.6 124 37.1
FAN08G1170 Fragaria x ananassa HOM05D006854 ORTHO05D029383 3.2e-06 56.6 130 33.8
FvH4_6g50641 Fragaria vesca HOM05D000082 ORTHO05D000038 4.2e-06 56.2 84 38.1
FAN14G3657 Fragaria x ananassa HOM05D006854 ORTHO05D000038 4.2e-06 56.2 84 41.7
RcHm_v2.0_Chr2g0171341 Rosa chinensis HOM05D000082 ORTHO05D000038 4.2e-06 56.2 98 38.8
FAN02G1701 Fragaria x ananassa HOM05D004879 ORTHO05D000038 5.5e-06 55.8 72 43.1
FAN04G2885 Fragaria x ananassa HOM05D006854 ORTHO05D011215 5.5e-06 55.8 93 36.6
FAN11G3614 Fragaria x ananassa HOM05D011534 ORTHO05D025449 5.5e-06 55.8 153 26.8
FAN20G1197 Fragaria x ananassa HOM05D004879 ORTHO05D000038 5.5e-06 55.8 77 41.6
FvH4_6g51870 Fragaria vesca HOM05D000082 ORTHO05D000038 7.2e-06 55.5 137 32.1
FAN14G4583 Fragaria x ananassa HOM05D000082 ORTHO05D000038 7.2e-06 55.5 137 32.1
FAN21G0175 Fragaria x ananassa HOM05D034375 ORTHO05D035579 7.2e-06 55.5 168 27.4
FAN28G0879 Fragaria x ananassa HOM05D000082 ORTHO05D000038 7.2e-06 55.5 90 37.8
RcHm_v2.0_Chr5g0014071 Rosa chinensis HOM05D034375 ORTHO05D035579 7.2e-06 55.5 173 26.6
FvH4_6g51730 Fragaria vesca HOM05D000082 ORTHO05D000038 9.4e-06 55.1 124 33.9
FAN14G4396 Fragaria x ananassa HOM05D004879 ORTHO05D000038 9.4e-06 55.1 155 28.4
FAN14G5331 Fragaria x ananassa HOM05D004879 ORTHO05D000038 9.4e-06 55.1 155 28.4
FAN20G2051 Fragaria x ananassa HOM05D004879 ORTHO05D029626 9.4e-06 55.1 156 27.6
FAN24G2371 Fragaria x ananassa HOM05D004879 ORTHO05D000038 9.4e-06 55.1 141 30.5
RcHm_v2.0_Chr2g0171261 Rosa chinensis HOM05D000082 ORTHO05D000038 9.4e-06 55.1 98 38.8


User provided reference genes

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