Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G3072 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.5e-60 236.1 133 100.0
FvH4_3g05660 Fragaria vesca HOM05D004997 ORTHO05D005921 4.5e-60 234.6 133 99.2
RcHm_v2.0_Chr5g0013981 Rosa chinensis HOM05D004997 ORTHO05D005921 3.2e-58 228.4 129 99.2
FAN21G2809 Fragaria x ananassa HOM05D004997 ORTHO05D005921 5.5e-58 227.6 130 98.5
MD10G1262900 Malus domestica HOM05D004997 ORTHO05D005921 3.3e-55 218.4 130 93.8
MD05G1284500 Malus domestica HOM05D004997 ORTHO05D005921 1.3e-54 216.5 130 93.1
ECA233G0220 Erigeron canadensis HOM05D004997 ORTHO05D005921 6.3e-54 214.2 129 91.5
CANSAT35G1260 Cannabis sativa HOM05D004997 ORTHO05D005921 8.2e-54 213.8 132 89.4
Migut.M00914 Erythranthe guttata HOM05D004997 ORTHO05D005921 8.2e-54 213.8 127 92.1
Prupe.4G079900 Prunus persica HOM05D004997 ORTHO05D005921 8.2e-54 213.8 130 91.5
FAN25G0101 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.8e-53 212.6 144 86.1
CSS0020008 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 2.4e-53 212.2 129 89.9
Ciclev10017164m.g Citrus clementina HOM05D004997 ORTHO05D005921 2.4e-53 212.2 129 91.5
Nn4g24866 Nelumbo nucifera HOM05D004997 ORTHO05D005921 3.1e-53 211.8 130 88.5
HanXRQChr01g0020611 Helianthus annuus HOM05D004997 ORTHO05D005921 5.3e-53 211.1 133 89.5
GSVIVG01021444001 Vitis vinifera HOM05D004997 ORTHO05D005921 5.3e-53 211.1 124 91.9
Aqoxy3G00593 Aquilegia oxysepala HOM05D004997 ORTHO05D005921 2.0e-52 209.1 133 87.2
Dinv32261 Davidia involucrata HOM05D004997 ORTHO05D005921 2.0e-52 209.1 129 88.4
Lj5g0010316 Lotus japonicus HOM05D004997 ORTHO05D005921 2.6e-52 208.8 129 89.1
CiPaw.09G124400 Carya illinoinensis HOM05D004997 ORTHO05D005921 3.4e-52 208.4 130 87.7
TAR626G0896 Trochodendron aralioides HOM05D004997 ORTHO05D005921 3.4e-52 208.4 129 87.6
Cfa000953 Carpinus fangiana HOM05D004997 ORTHO05D005921 4.5e-52 208.0 130 87.7
PSO339G4484 Papaver somniferum HOM05D004997 ORTHO05D005921 4.5e-52 208.0 130 86.9
SGA_v2.0_scaffold1G00167 Striga asiatica HOM05D004997 ORTHO05D005921 4.5e-52 208.0 127 89.0
HanXRQChr11g0340951 Helianthus annuus HOM05D004997 ORTHO05D005921 5.9e-52 207.6 127 89.0
Lj4g0009583 Lotus japonicus HOM05D004997 ORTHO05D005921 5.9e-52 207.6 129 88.4
Actinidia07691 Actinidia chinensis HOM05D004997 ORTHO05D005921 7.7e-52 207.2 129 87.6
Eucgr.E02397 Eucalyptus grandis HOM05D004997 ORTHO05D005921 7.7e-52 207.2 130 86.9
Gohir.A10G040300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 7.7e-52 207.2 131 87.0
MSTRG.7483 Avicennia marina HOM05D004997 ORTHO05D005921 1.0e-51 206.8 127 88.2
Duzib192G0549 Durio zibethinus HOM05D004997 ORTHO05D005921 1.0e-51 206.8 134 87.3
Gorai.011G043400 Gossypium raimondii HOM05D004997 ORTHO05D005921 1.3e-51 206.5 131 87.0
PSO384G3576 Papaver somniferum HOM05D004997 ORTHO05D005921 1.3e-51 206.5 130 86.2
Thecc.06G151500 Theobroma cacao HOM05D004997 ORTHO05D005921 1.3e-51 206.5 131 87.8
Gohir.D05G151300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.2e-51 205.7 131 87.0
Gorai.009G155300 Gossypium raimondii HOM05D004997 ORTHO05D005921 2.2e-51 205.7 131 87.0
CARHR029400 Cardamine hirsuta HOM05D004997 ORTHO05D005921 2.9e-51 205.3 130 86.9
Potri.004G131900 Populus trichocarpa HOM05D004997 ORTHO05D005921 2.9e-51 205.3 129 87.6
CiPaw.10G092400 Carya illinoinensis HOM05D004997 ORTHO05D005921 3.8e-51 204.9 130 85.4
TWI38G0351 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 5.0e-51 204.5 129 86.0
MELO3C002717.2 Cucumis melo HOM05D004997 ORTHO05D005921 6.5e-51 204.1 130 85.4
THA.LOC104814295 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 6.5e-51 204.1 130 86.2
MSTRG.16239 Avicennia marina HOM05D004997 ORTHO05D005921 8.5e-51 203.8 127 85.8
Carub.0001s2824 Capsella rubella HOM05D004997 ORTHO05D005921 8.5e-51 203.8 130 85.4
Sed0006544 Sechium edule HOM05D004997 ORTHO05D005921 8.5e-51 203.8 130 85.4
Gohir.A05G148700 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.1e-50 203.4 131 87.0
Medtr5g055650 Medicago truncatula HOM05D004997 ORTHO05D005921 1.1e-50 203.4 129 86.0
Sopen08g006800 Solanum pennellii HOM05D004997 ORTHO05D005921 1.1e-50 203.4 130 83.8
TWI38G1166 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 1.4e-50 203.0 127 86.6
Lalb_Chr05g0222161 Lupinus albus HOM05D004997 ORTHO05D005921 1.9e-50 202.6 127 85.8
AL1G43880 Arabidopsis lyrata HOM05D004997 ORTHO05D005921 2.5e-50 202.2 130 84.6
Sed0005528 Sechium edule HOM05D004997 ORTHO05D005921 2.5e-50 202.2 130 85.4
Solyc08g016420.3 Solanum lycopersicum HOM05D004997 ORTHO05D005921 2.5e-50 202.2 130 83.1
THA.LOC104812669 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 2.5e-50 202.2 130 85.4
Psat2g084800 Pisum sativum HOM05D004997 ORTHO05D005921 3.2e-50 201.8 129 85.3
VMungo0251G3606 Vigna mungo HOM05D004997 ORTHO05D005921 3.2e-50 201.8 129 85.3
Glyma.12G006600 Glycine max HOM05D004997 ORTHO05D005921 5.5e-50 201.1 129 84.5
Phvul.002G321900 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 5.5e-50 201.1 129 84.5
AT1G29990 Arabidopsis thaliana HOM05D004997 ORTHO05D005921 7.2e-50 200.7 129 84.5
Gohir.D10G041200 Gossypium hirsutum HOM05D004997 ORTHO05D005921 7.2e-50 200.7 131 85.5
Sp1g25870 Schrenkiella parvula HOM05D004997 ORTHO05D005921 9.4e-50 200.3 130 83.8
Glyma.08G046600 Glycine max HOM05D004997 ORTHO05D005921 1.2e-49 199.9 129 83.7
Gorai.002G185400 Gossypium raimondii HOM05D004997 ORTHO05D005921 6.1e-49 197.6 133 84.2
SGA_v2.0_scaffold333G48998 Striga asiatica HOM05D004997 ORTHO05D005921 6.1e-49 197.6 140 80.0
BcaC06g35482 Brassica carinata HOM05D004997 ORTHO05D005921 7.9e-49 197.2 131 81.7
BolC7t42045H Brassica oleracea HOM05D004997 ORTHO05D005921 7.9e-49 197.2 131 81.7
unitig_32.g11442 Utricularia gibba HOM05D004997 ORTHO05D005921 7.9e-49 197.2 124 85.5
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea HOM05D004997 ORTHO05D005921 5.1e-48 194.5 139 79.1
BcaB07g32600 Brassica carinata HOM05D004997 ORTHO05D005921 8.8e-48 193.7 130 80.8
A09p36530 Brassica napus HOM05D004997 ORTHO05D005921 8.8e-48 193.7 130 80.8
BraA09t39174Z Brassica rapa HOM05D004997 ORTHO05D005921 8.8e-48 193.7 130 80.8
C05p28750 Brassica napus HOM05D004997 ORTHO05D005921 3.3e-47 191.8 130 80.0
BolC5t31593H Brassica oleracea HOM05D004997 ORTHO05D005921 3.3e-47 191.8 130 80.0
Thhalv10009093m.g Eutrema salsugineum HOM05D004997 ORTHO05D005921 1.7e-46 189.5 130 80.0
BcaB03g13847 Brassica carinata HOM05D004997 ORTHO05D005921 4.8e-46 188.0 131 80.2
HPP92_006252 Vanilla planifolia HOM05D004997 ORTHO05D005921 4.8e-46 188.0 130 76.2
CDE09G0791 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 8.2e-46 187.2 127 79.5
CDE02G0055 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 1.8e-45 186.0 127 78.7
PGR042G1500 Punica granatum HOM05D004997 ORTHO05D005921 3.1e-45 185.3 130 78.5
Lsat_1_v5_gn_1_91801 Lactuca sativa HOM05D004997 ORTHO05D005921 5.3e-45 184.5 106 93.4
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 1.5e-44 183.0 135 77.8
Manes.11G058500 Manihot esculenta HOM05D004997 ORTHO05D005921 1.5e-44 183.0 112 86.6
ClCG03G007080 Citrullus lanatus HOM05D004997 ORTHO05D005921 2.6e-44 182.2 185 61.1
Os02g0246300 Oryza sativa ssp. japonica HOM05D004997 ORTHO05D005921 2.6e-44 182.2 126 75.4
Ah.09g232610 Amaranthus hybridus HOM05D000413 ORTHO05D000292 3.5e-44 181.8 115 83.5
FAN16G0953 Fragaria x ananassa HOM05D004997 ORTHO05D005921 4.5e-44 181.4 105 93.3
Atru.chr10.1243 Acer truncatum HOM05D004997 ORTHO05D005921 5.9e-44 181.0 111 88.3
TPR.G13287 Trifolium pratense HOM05D004997 ORTHO05D005921 5.9e-44 181.0 112 85.7
Prupe.3G104900 Prunus persica HOM05D004997 ORTHO05D005921 7.7e-44 180.6 105 93.3
Gohir.D01G100600 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.7e-43 179.5 124 82.3
SEGI_33388 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 2.9e-43 178.7 129 75.2
Duzib235G0692 Durio zibethinus HOM05D004997 ORTHO05D005921 6.5e-43 177.6 112 86.6
CAN.G134.135 Capsicum annuum HOM05D004997 ORTHO05D000105 1.1e-42 176.8 110 84.5
Gorai.002G125400 Gossypium raimondii HOM05D004997 ORTHO05D005921 1.4e-42 176.4 124 80.6
Hund21531 Selenicereus undatus HOM05D004997 ORTHO05D005921 1.4e-42 176.4 125 78.4
CsaV3_1G032650 Cucumis sativus L. HOM05D004997 ORTHO05D005921 3.2e-42 175.3 112 83.0
Rhsim13G0211800 Rhododendron simsii HOM05D004997 ORTHO05D005921 7.2e-42 174.1 104 90.4
CSS0046404 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 1.2e-41 173.3 105 88.6
CAN.G134.136 Capsicum annuum HOM05D004997 ORTHO05D005921 2.7e-41 172.2 110 82.7
MBI07_g26358_MAGBIO Magnolia biondii HOM05D004997 ORTHO05D005921 4.7e-41 171.4 108 82.4
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea HOM05D004997 ORTHO05D005921 3.0e-40 168.7 120 78.3
BcaC05g27010 Brassica carinata HOM05D004997 ORTHO05D005921 3.9e-40 168.3 112 80.4
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 6.7e-40 167.5 123 77.2
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 1.5e-39 166.4 120 76.7
Cc02_g37190 Coffea canephora HOM05D004997 ORTHO05D005921 1.5e-39 166.4 133 71.4
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 5.7e-39 164.5 128 73.4
Mapoly0006s0079 Marchantia polymorpha HOM05D004997 ORTHO05D005921 3.7e-38 161.8 126 67.5
ATR0743G157 Amborella trichopoda HOM05D004997 ORTHO05D005921 4.8e-38 161.4 108 79.6
Zm00001eb238610 Zea mays HOM05D004997 ORTHO05D005921 6.3e-38 161.0 130 71.5
Pp3c22_1770 Physcomitrium patens HOM05D004997 ORTHO05D005921 1.1e-37 160.2 125 66.4
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis HOM05D004997 ORTHO05D005921 3.1e-37 158.7 128 64.1
C07p15580 Brassica napus HOM05D004997 ORTHO05D005921 4.1e-37 158.3 120 74.2
EL10Ac8g19712 Beta vulgaris HOM05D004997 ORTHO05D005921 2.0e-36 156.0 161 59.0
vmacro04021 Vaccinium macrocarpon HOM05D004997 ORTHO05D005921 1.7e-35 152.9 87 90.8
Aa31LG6G5670 Aethionema arabicum HOM05D004997 ORTHO05D005921 2.2e-35 152.5 132 68.2
COL.COLO4_31081 Corchorus olitorius HOM05D004997 ORTHO05D005921 6.5e-35 151.0 87 89.7
SMO367G0874 Selaginella moellendorffii HOM05D004997 ORTHO05D005921 1.5e-34 149.8 110 69.1
AUR62039776 Chenopodium quinoa HOM05D004997 ORTHO05D005921 1.9e-34 149.4 84 91.7
Dinv30737 Davidia involucrata HOM05D004997 ORTHO05D005921 2.5e-34 149.1 90 88.9
PGSC0003DMG400009647 Solanum tuberosum HOM05D004997 ORTHO05D005921 3.2e-34 148.7 91 85.7
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea HOM05D004997 ORTHO05D005921 4.2e-34 148.3 92 85.9
Oeu034156.1 Olea europaea HOM05D004997 ORTHO05D005921 5.5e-34 147.9 90 86.7
Peaxi162Scf01211g00142 Petunia axillaris HOM05D004997 ORTHO05D005921 1.2e-33 146.7 88 89.8
Oeu052376.1 Olea europaea HOM05D004997 ORTHO05D005921 2.7e-33 145.6 90 84.4
Sc17g0004940 Simmondsia chinensis HOM05D004997 ORTHO05D005921 8.0e-33 144.1 90 83.3
CAN.G3523.1 Capsicum annuum HOM05D004997 ORTHO05D005921 2.3e-32 142.5 91 82.4
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 5.2e-32 141.4 137 62.0
Phvul.009G128800 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 2.0e-31 139.4 87 86.2
Actinidia39569 Actinidia chinensis HOM05D004997 ORTHO05D005921 2.6e-31 139.0 129 66.7
CAN.G134.137 Capsicum annuum HOM05D004997 ORTHO05D005921 4.4e-31 138.3 94 77.7
SEGI_19850 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 1.4e-29 133.3 93 77.4
Gohir.D01G149300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 3.1e-29 132.1 95 80.0
SalBow8G3614 Salvia bowleyana HOM05D004997 ORTHO05D005921 2.9e-27 125.6 102 70.6
Lsat_1_v5_gn_5_30841 Lactuca sativa HOM05D004997 ORTHO05D005921 4.2e-26 121.7 71 88.7
Nitab4.5_0000348g0240 Nicotiana tabacum HOM05D004997 ORTHO05D005921 2.1e-25 119.4 65 93.8
CDE02G2003 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 6.1e-25 117.9 95 70.5
Nitab4.5_0010327g0020 Nicotiana tabacum HOM05D004997 ORTHO05D005921 8.0e-25 117.5 91 73.6
AUR62030207 Chenopodium quinoa HOM05D004997 ORTHO05D005921 2.2e-22 109.4 61 95.1
Haze_05586 Corylus avellana HOM05D004997 ORTHO05D005921 3.1e-21 105.5 201 41.8
Sabra04G0085700 Salix brachista HOM05D004997 ORTHO05D005921 9.1e-21 104.0 63 84.1
PRCOL_00000028 Prasinoderma coloniale HOM05D004997 ORTHO05D005921 4.5e-20 101.7 125 44.8
Zm00001eb258640 Zea mays HOM05D004997 ORTHO05D005921 8.6e-19 97.4 67 71.6
Zm00001eb151600 Zea mays HOM05D000394 ORTHO05D016690 1.1e-18 97.1 64 75.0
Zm00001eb310800 Zea mays HOM05D000394 ORTHO05D016690 3.3e-18 95.5 64 73.4
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 5.5e-18 94.7 64 73.4
MCO01G210 Micromonas commoda HOM05D004997 ORTHO05D005921 9.5e-18 94.0 121 41.3
Zm00001eb139040 Zea mays HOM05D000901 ORTHO05D005921 9.5e-18 94.0 78 62.8
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 3.6e-17 92.0 65 72.3
Manes.09G021201 Manihot esculenta HOM05D004997 ORTHO05D005921 8.0e-17 90.9 110 53.6
Zm00001eb344510 Zea mays HOM05D000901 ORTHO05D000768 4.0e-16 88.6 65 69.2
Cre12.g502750 Chlamydomonas reinhardtii HOM05D004997 ORTHO05D005921 7.5e-15 84.3 121 38.0
Haze_05599 Corylus avellana HOM05D004997 ORTHO05D005921 2.0e-12 76.3 172 38.4
Cfa022129 Carpinus fangiana HOM05D004997 ORTHO05D005921 5.0e-11 71.6 123 33.3
CBR_g48714 Chara braunii HOM05D004997 ORTHO05D005921 9.5e-10 67.4 124 40.3
arahy.Tifrunner.gnm1.ann1.MPJ1GQ Arachis hypogaea HOM05D004997 ORTHO05D005921 1.5e-07 60.1 51 64.7


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