Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 0.0e+00 1293.1 658 100.0
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 0.0e+00 1252.3 665 94.6
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 0.0e+00 1141.3 665 87.4
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 0.0e+00 1109.4 665 83.3
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 3.2e-215 752.3 440 87.7
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 1.1e-207 727.2 658 60.3
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 1.2e-203 713.8 650 60.2
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 9.3e-199 697.6 636 59.6
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 1.9e-191 673.3 655 56.9
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 7.3e-188 661.4 701 52.8
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 9.0e-186 654.4 652 57.2
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 1.1e-183 647.5 628 56.8
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 1.2e-182 644.0 682 54.0
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 4.6e-182 642.1 635 57.2
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 1.0e-181 641.0 645 55.3
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 3.3e-180 636.0 664 54.2
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 1.6e-179 633.6 678 53.5
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 4.0e-178 629.0 665 54.3
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 4.5e-177 625.5 523 62.3
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 6.5e-176 621.7 692 50.4
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 5.5e-175 618.6 641 54.9
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 9.3e-175 617.8 652 53.4
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 2.1e-174 616.7 647 54.9
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 3.9e-173 612.5 473 64.3
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 4.8e-171 605.5 640 53.4
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 6.3e-171 605.1 693 52.7
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 1.4e-170 604.0 567 57.3
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 1.4e-170 604.0 643 52.6
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 2.2e-168 596.7 532 60.2
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 5.0e-168 595.5 638 52.7
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 8.4e-168 594.7 454 65.2
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 1.1e-167 594.3 643 52.9
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 2.5e-167 593.2 634 53.6
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 2.7e-166 589.7 622 53.1
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 1.8e-165 587.0 444 65.1
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 2.3e-165 586.6 570 57.4
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 5.1e-165 585.5 430 66.3
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 1.9e-164 583.6 627 53.6
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 2.8e-163 579.7 642 52.0
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 3.7e-163 579.3 643 51.9
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 1.1e-162 577.8 543 56.9
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 4.1e-162 575.9 522 58.2
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 6.9e-162 575.1 527 56.2
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 1.2e-161 574.3 511 56.9
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 2.2e-160 570.1 479 59.7
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 2.9e-160 569.7 467 61.5
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 3.8e-160 569.3 639 51.6
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 1.1e-159 567.8 685 47.3
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 1.1e-159 567.8 562 54.4
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 3.2e-159 566.2 497 58.4
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 3.2e-159 566.2 452 61.7
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 9.4e-159 564.7 559 54.2
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 2.3e-157 560.1 553 55.5
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 3.0e-157 559.7 578 54.3
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 1.1e-156 557.8 465 61.1
Zm00001eb069260 Zea mays HOM05D007621 ORTHO05D009631 2.5e-156 556.6 522 55.6
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 7.4e-156 555.1 565 53.8
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 4.1e-154 549.3 479 58.2
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 6.9e-154 548.5 659 49.8
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 8.5e-152 541.6 650 48.9
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 1.0e-149 534.6 522 54.4
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 1.8e-149 533.9 599 50.4
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 1.1e-148 531.2 517 54.7
Mapoly0104s0019 Marchantia polymorpha HOM05D007621 ORTHO05D009631 2.0e-145 520.4 409 61.9
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 2.5e-143 513.5 602 50.8
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 8.0e-142 508.4 435 59.1
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 4.4e-140 502.7 593 51.3
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 1.4e-138 497.7 412 60.0
Zm00001eb081180 Zea mays HOM05D007621 ORTHO05D009631 5.2e-125 452.6 368 60.6
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 2.1e-118 430.6 508 49.6
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 4.4e-108 396.4 287 68.3
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 4.4e-108 396.4 489 50.1
CBR_g725 Chara braunii HOM05D007621 ORTHO05D009631 1.3e-107 394.8 419 48.0
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 6.0e-97 359.4 498 47.8
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 6.2e-94 349.4 394 51.5
Zm00001eb274720 Zea mays HOM05D007621 ORTHO05D009631 8.4e-91 339.0 276 61.6
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 4.3e-79 300.1 291 55.0
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 1.1e-74 285.4 240 64.6
FvH4_6g02023 Fragaria vesca HOM05D007621 ORTHO05D009631 1.5e-63 248.4 133 86.5
arahy.Tifrunner.gnm1.ann1.C857YU Arachis hypogaea HOM05D007621 ORTHO05D009631 5.6e-63 246.5 280 48.6
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 2.5e-55 221.1 187 58.8
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 2.6e-36 157.9 155 60.6
Cre02.g116800 Chlamydomonas reinhardtii HOM05D007621 ORTHO05D009631 8.2e-30 136.3 480 28.1
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 1.1e-26 125.9 78 70.5
Atru.chr10.2012 Acer truncatum HOM05D007621 ORTHO05D009631 2.5e-26 124.8 133 51.1
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 4.0e-24 117.5 323 35.9
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 2.0e-15 88.6 126 44.4
AagrBONN_evm.TU.Sc2ySwM_340.408 Anthoceros agrestis HOM05D007621 ORTHO05D009631 5.7e-15 87.0 82 50.0
Atru.chr10.2011 Acer truncatum HOM05D007621 ORTHO05D009631 1.3e-14 85.9 51 68.6
MCO11G679 Micromonas commoda HOM05D000032 ORTHO05D028824 3.8e-11 74.3 150 36.7
Cre03.g188750 Chlamydomonas reinhardtii HOM05D000032 ORTHO05D028824 4.2e-10 70.9 148 33.8
PRCOL_00005975 Prasinoderma coloniale HOM05D000032 ORTHO05D028824 1.6e-09 68.9 192 29.2
Haze_26842 Corylus avellana HOM05D000032 ORTHO05D028824 4.7e-09 67.4 155 32.3
Sabra04G0020100 Salix brachista HOM05D007621 ORTHO05D009631 3.0e-08 64.7 164 28.0
SGA_v2.0_scaffold86G26914 Striga asiatica HOM05D007621 ORTHO05D009631 5.2e-08 63.9 53 58.5
EL10Ac8g20531 Beta vulgaris HOM05D007621 ORTHO05D009631 2.6e-07 61.6 294 28.9


User provided reference genes

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