Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G2553 Fragaria x ananassa HOM05D005725 ORTHO05D007531 0.0e+00 1176.4 565 100.0
FAN21G2681 Fragaria x ananassa HOM05D005725 ORTHO05D007531 7.2e-293 1010.0 563 88.8
FAN16G0048 Fragaria x ananassa HOM05D005725 ORTHO05D007531 3.0e-283 978.0 563 86.9
FvH4_3g13240 Fragaria vesca HOM05D005725 ORTHO05D007531 2.5e-277 958.4 503 93.8
FAN25G0714 Fragaria x ananassa HOM05D005725 ORTHO05D007531 2.1e-260 902.1 562 81.9
RcHm_v2.0_Chr5g0021701 Rosa chinensis HOM05D005725 ORTHO05D007531 9.0e-243 843.6 503 82.7
Prupe.4G119800 Prunus persica HOM05D005725 ORTHO05D007531 1.1e-195 687.2 504 68.8
MD05G1243800 Malus domestica HOM05D005725 ORTHO05D007531 5.0e-177 625.2 509 63.1
Dinv17876 Davidia involucrata HOM05D005725 ORTHO05D007531 1.3e-169 600.5 511 58.3
CANSAT54G1139 Cannabis sativa HOM05D005725 ORTHO05D007531 8.9e-166 587.8 504 58.5
CiPaw.10G107600 Carya illinoinensis HOM05D005725 ORTHO05D007531 3.5e-162 575.9 524 56.3
Nn7g38404 Nelumbo nucifera HOM05D005725 ORTHO05D007531 2.3e-158 563.1 514 54.5
Manes.03G071900 Manihot esculenta HOM05D005725 ORTHO05D007531 2.3e-153 546.6 504 55.6
Potri.001G075300 Populus trichocarpa HOM05D005725 ORTHO05D007531 1.9e-152 543.5 503 54.9
GSVIVG01010083001 Vitis vinifera HOM05D005725 ORTHO05D007531 5.6e-152 542.0 519 53.0
MELO3C007000.2 Cucumis melo HOM05D005725 ORTHO05D007531 4.3e-144 515.8 509 52.5
Cfa001153 Carpinus fangiana HOM05D005725 ORTHO05D007531 7.3e-144 515.0 453 57.0
Lalb_Chr18g0051971 Lupinus albus HOM05D005725 ORTHO05D007531 6.6e-137 491.9 511 50.9
TWI38G1126 Tripterygium wilfordii HOM05D005725 ORTHO05D007531 6.6e-137 491.9 504 53.0
QL11p011022 Quercus lobata HOM05D005725 ORTHO05D007531 5.2e-134 482.3 840 36.7
Thecc.02G002000 Theobroma cacao HOM05D005725 ORTHO05D007531 1.7e-132 477.2 505 50.7
Aqoxy1G01377 Aquilegia oxysepala HOM05D005725 ORTHO05D007531 9.3e-131 471.5 506 48.6
ClCG01G025890 Citrullus lanatus HOM05D005725 ORTHO05D007531 1.6e-130 470.7 488 50.6
Sabra01G0053700 Salix brachista HOM05D005725 ORTHO05D007531 1.7e-129 467.2 632 43.7
Glyma.15G155900 Glycine max HOM05D005725 ORTHO05D007531 2.3e-129 466.8 510 50.0
TPR.G30931 Trifolium pratense HOM05D005725 ORTHO05D007531 1.3e-127 461.1 509 48.5
Medtr2g437810 Medicago truncatula HOM05D005725 ORTHO05D007531 2.1e-127 460.3 508 49.0
Atru.chr10.248 Acer truncatum HOM05D005725 ORTHO05D007531 8.1e-127 458.4 504 48.8
Eucgr.D00006 Eucalyptus grandis HOM05D005725 ORTHO05D007531 2.4e-126 456.8 502 48.4
VMungo1309G0521 Vigna mungo HOM05D005725 ORTHO05D007531 6.9e-126 455.3 509 48.9
arahy.Tifrunner.gnm1.ann1.2M6VYA Arachis hypogaea HOM05D005725 ORTHO05D007531 9.0e-126 454.9 515 48.2
Lj6g0004794 Lotus japonicus HOM05D005725 ORTHO05D007531 1.5e-125 454.1 516 48.6
Glyma.09G048600 Glycine max HOM05D005725 ORTHO05D007531 2.0e-125 453.8 511 48.9
Phvul.009G244300 Phaseolus vulgaris HOM05D005725 ORTHO05D007531 7.6e-125 451.8 507 48.7
COL.COLO4_25036 Corchorus olitorius HOM05D005725 ORTHO05D007531 1.9e-123 447.2 505 48.7
ECA232G4493 Erigeron canadensis HOM05D005725 ORTHO05D007531 7.1e-123 445.3 513 48.3
Duzib132G0485 Durio zibethinus HOM05D005725 ORTHO05D007531 1.2e-122 444.5 511 47.6
Psat1g151080 Pisum sativum HOM05D005725 ORTHO05D007531 4.6e-122 442.6 506 47.0
RcHm_v2.0_Chr5g0021601 Rosa chinensis HOM05D005725 ORTHO05D007531 3.0e-121 439.9 287 75.6
Gorai.007G055200 Gossypium raimondii HOM05D005725 ORTHO05D007531 7.4e-120 435.3 511 47.9
Sopen01g016500 Solanum pennellii HOM05D005725 ORTHO05D007531 7.4e-120 435.3 504 46.2
AL6G28440 Arabidopsis lyrata HOM05D005725 ORTHO05D007531 4.8e-119 432.6 509 46.0
Gohir.D11G050800 Gossypium hirsutum HOM05D005725 ORTHO05D007531 4.8e-119 432.6 511 47.7
Solyc01g021640.3 Solanum lycopersicum HOM05D005725 ORTHO05D007531 6.2e-119 432.2 504 45.6
Ca_02400_v3 Cicer arietinum L. HOM05D005725 ORTHO05D007531 1.1e-118 431.4 608 42.9
Carub.0006s1558 Capsella rubella HOM05D005725 ORTHO05D007531 1.4e-118 431.0 505 46.1
DCAR_001262 Daucus carota HOM05D005725 ORTHO05D007531 3.1e-118 429.9 516 45.0
Gohir.A11G047200 Gossypium hirsutum HOM05D005725 ORTHO05D007531 1.2e-117 427.9 510 47.3
PSO541G5061 Papaver somniferum HOM05D005725 ORTHO05D007531 3.4e-117 426.4 488 48.0
CsaV3_6G053120 Cucumis sativus L. HOM05D005725 ORTHO05D007531 1.7e-116 424.1 416 52.9
Peaxi162Scf00378g00520 Petunia axillaris HOM05D005725 ORTHO05D007531 6.4e-116 422.2 506 47.4
AT5G17370 Arabidopsis thaliana HOM05D005725 ORTHO05D007531 8.4e-116 421.8 520 45.2
HanXRQChr09g0257851 Helianthus annuus HOM05D005725 ORTHO05D007531 1.1e-115 421.4 511 43.4
vmacro03566 Vaccinium macrocarpon HOM05D005725 ORTHO05D007531 1.0e-113 414.8 678 37.8
Thhalv10015915m.g Eutrema salsugineum HOM05D005725 ORTHO05D007531 1.6e-111 407.5 511 44.2
arahy.Tifrunner.gnm1.ann1.GBFD5K Arachis hypogaea HOM05D005725 ORTHO05D007531 6.2e-111 405.6 471 48.0
TAR626G0027 Trochodendron aralioides HOM05D005725 ORTHO05D007531 4.0e-110 402.9 348 56.6
CARHR195840 Cardamine hirsuta HOM05D005725 ORTHO05D007531 2.0e-109 400.6 513 45.4
A02p04160 Brassica napus HOM05D005725 ORTHO05D007531 1.4e-107 394.4 516 44.6
BolC2t06810H Brassica oleracea HOM05D005725 ORTHO05D007531 1.4e-107 394.4 520 44.0
MSTRG.16376 Avicennia marina HOM05D005725 ORTHO05D007531 1.9e-107 394.0 501 43.3
BcaC03g18554 Brassica carinata HOM05D005725 ORTHO05D007531 2.5e-107 393.7 518 44.4
Sp6g26850 Schrenkiella parvula HOM05D005725 ORTHO05D007531 5.5e-107 392.5 516 43.8
C02p09010 Brassica napus HOM05D005725 ORTHO05D007531 7.1e-107 392.1 519 43.9
BraA02t05379Z Brassica rapa HOM05D005725 ORTHO05D007531 9.3e-107 391.7 516 44.2
Cc09_g04730 Coffea canephora HOM05D005725 ORTHO05D007531 1.6e-106 391.0 511 41.9
AUR62003571 Chenopodium quinoa HOM05D005725 ORTHO05D007531 3.9e-105 386.3 505 44.0
BcaB05g23263 Brassica carinata HOM05D005725 ORTHO05D007531 1.9e-104 384.0 517 43.3
Ah.03g147910 Amaranthus hybridus HOM05D005725 ORTHO05D007531 5.7e-104 382.5 509 43.0
Hund26771 Selenicereus undatus HOM05D005725 ORTHO05D007531 1.3e-103 381.3 483 44.3
PGR004G2791 Punica granatum HOM05D005725 ORTHO05D007531 1.1e-102 378.3 511 43.8
arahy.Tifrunner.gnm1.ann1.G9C5AI Arachis hypogaea HOM05D005725 ORTHO05D007531 2.4e-102 377.1 471 46.3
Sed0022851 Sechium edule HOM05D005725 ORTHO05D007531 1.0e-100 371.7 433 47.1
Aa31LG11G12260 Aethionema arabicum HOM05D005725 ORTHO05D007531 4.6e-98 362.8 528 41.7
SalBow8G4963 Salvia bowleyana HOM05D005725 ORTHO05D007531 1.8e-97 360.9 500 41.6
Ciclev10015389m.g Citrus clementina HOM05D005725 ORTHO05D007531 8.2e-95 352.1 430 46.7
Migut.M02028 Erythranthe guttata HOM05D005725 ORTHO05D007531 1.1e-94 351.7 499 40.3
Zm00001eb298410 Zea mays HOM05D005725 ORTHO05D007531 1.1e-94 351.7 513 39.0
Os07g0108000 Oryza sativa ssp. japonica HOM05D005725 ORTHO05D007531 5.3e-94 349.4 508 38.6
Nitab4.5_0001484g0010 Nicotiana tabacum HOM05D005725 ORTHO05D007531 3.4e-93 346.7 397 46.3
Nitab4.5_0000253g0020 Nicotiana tabacum HOM05D005725 ORTHO05D007531 6.5e-92 342.4 462 41.3
HPP92_000831 Vanilla planifolia HOM05D005725 ORTHO05D007531 4.7e-90 336.3 515 38.4
ATR0794G001 Amborella trichopoda HOM05D005725 ORTHO05D007531 3.9e-89 333.2 508 39.2
CSS0030006 Camellia sinensis var. sinensis HOM05D005725 ORTHO05D007531 9.7e-88 328.6 526 40.3
Lsat_1_v5_gn_8_107401 Lactuca sativa HOM05D005725 ORTHO05D007531 4.8e-87 326.2 422 43.1
AUR62017886 Chenopodium quinoa HOM05D005725 ORTHO05D007531 4.5e-85 319.7 507 37.9
Haze_05198 Corylus avellana HOM05D005725 ORTHO05D007531 2.0e-77 294.3 236 64.0
SHI12770 Sapria himalayana HOM05D005725 ORTHO05D000023 2.2e-76 290.8 363 44.1
DCAR_004356 Daucus carota HOM05D005725 ORTHO05D007531 5.9e-69 266.2 460 37.4
RcHm_v2.0_Chr5g0021611 Rosa chinensis HOM05D005725 ORTHO05D007531 1.3e-63 248.4 160 77.5
Pp3c6_29180 Physcomitrium patens HOM05D005725 ORTHO05D007531 5.4e-62 243.0 527 31.5
Duzib052G0524 Durio zibethinus HOM05D005725 ORTHO05D007531 9.8e-56 222.2 343 39.4
Atru.chr2.2825 Acer truncatum HOM05D005725 ORTHO05D007531 1.0e-52 212.2 370 38.4
Sc05g0005240 Simmondsia chinensis HOM05D005725 ORTHO05D007531 1.3e-52 211.8 348 37.4
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 7.5e-48 196.1 286 41.3
Haze_05199 Corylus avellana HOM05D005725 ORTHO05D007531 1.9e-46 191.4 264 42.0
DCAR_004355 Daucus carota HOM05D005725 ORTHO05D007531 5.4e-46 189.9 451 30.4
CDE06G0984 Ceratophyllum demersum HOM05D005725 ORTHO05D007531 5.6e-43 179.9 282 37.9
Potri.003G155900 Populus trichocarpa HOM05D005725 ORTHO05D007531 7.3e-43 179.5 179 54.2
ECA232G1808 Erigeron canadensis HOM05D005725 ORTHO05D007531 2.1e-42 177.9 331 34.7
Mapoly0033s0026 Marchantia polymorpha HOM05D005725 ORTHO05D007531 2.1e-42 177.9 560 28.6
TAR626G0843 Trochodendron aralioides HOM05D005725 ORTHO05D007531 5.6e-35 153.3 133 55.6
EL10Ac6g15292 Beta vulgaris HOM05D005725 ORTHO05D007531 2.6e-32 144.4 105 60.0
CBR_g22873 Chara braunii HOM05D005725 ORTHO05D007531 3.2e-30 137.5 600 24.5
Ciclev10017729m.g Citrus clementina HOM05D005725 ORTHO05D007531 6.6e-28 129.8 78 73.1
Oeu013488.1 Olea europaea HOM05D005725 ORTHO05D007531 8.1e-26 122.9 171 36.8
SGA_v2.0_scaffold423G51459 Striga asiatica HOM05D005725 ORTHO05D007531 1.1e-25 122.5 191 38.2
SEGI_40606 Sequoiadendron giganteum HOM05D005725 ORTHO05D007531 1.5e-24 118.6 154 45.5
Oeu005615.1 Olea europaea HOM05D000039 ORTHO05D005263 2.6e-24 117.9 77 62.3
SMO230G0054 Selaginella moellendorffii HOM05D005725 ORTHO05D007531 1.9e-22 111.7 229 29.7
BcaC05g29074 Brassica carinata HOM05D005725 ORTHO05D007531 2.3e-20 104.8 135 41.5
A03p08350 Brassica napus HOM05D005725 ORTHO05D007531 3.0e-20 104.4 284 31.3
Dinv31193 Davidia involucrata HOM05D005725 ORTHO05D020553 4.7e-18 97.1 91 54.9
BolC5t33962H Brassica oleracea HOM05D005725 ORTHO05D007531 1.1e-17 95.9 129 40.3
AagrBONN_evm.TU.Sc2ySwM_368.2823 Anthoceros agrestis HOM05D005725 ORTHO05D007531 6.9e-17 93.2 183 31.1
BcaC04g22388 Brassica carinata HOM05D005725 ORTHO05D007531 3.4e-16 90.9 114 41.2
C09p19870 Brassica napus HOM05D005725 ORTHO05D007531 3.4e-16 90.9 114 41.2
BolC9t54892H Brassica oleracea HOM05D005725 ORTHO05D007531 3.4e-16 90.9 114 41.2
C09p34670 Brassica napus HOM05D005725 ORTHO05D007531 8.4e-15 86.3 138 36.2
BolC9t56313H Brassica oleracea HOM05D005725 ORTHO05D007531 8.4e-15 86.3 138 36.2
unitig_746.g26585 Utricularia gibba HOM05D005725 ORTHO05D007531 1.1e-14 85.9 142 40.1
C05p52870 Brassica napus HOM05D005725 ORTHO05D007531 2.8e-10 71.2 132 34.1
Atru.chr1.2967 Acer truncatum HOM05D005725 ORTHO05D007531 1.2e-08 65.9 106 40.6
Atru.chr3.3228 Acer truncatum HOM05D000154 ORTHO05D000092 2.0e-08 65.1 61 47.5
Cpa.g.c41422 Carica papaya HOM05D005725 ORTHO05D007531 1.3e-07 62.4 44 61.4
SHI12772 Sapria himalayana HOM05D005725 ORTHO05D007531 4.9e-07 60.5 74 33.8
CiPaw.09G139700 Carya illinoinensis HOM05D005725 ORTHO05D007531 1.4e-06 58.9 103 40.8
BcaB01g04934 Brassica carinata HOM05D005725 ORTHO05D093362 2.4e-06 58.2 68 48.5
SEGI_16346 Sequoiadendron giganteum HOM05D005725 ORTHO05D007531 7.1e-06 56.6 101 32.7


User provided reference genes

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