Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G2465 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.6e-92 342.0 175 100.0
RcHm_v2.0_Chr2g0128681 Rosa chinensis HOM05D000876 ORTHO05D000285 8.3e-46 187.6 187 57.8
FvH4_5g23913 Fragaria vesca HOM05D000876 ORTHO05D000285 1.8e-45 186.4 177 59.9
FvH4_1g28413 Fragaria vesca HOM05D000876 ORTHO05D015047 2.5e-42 176.0 159 61.0
FAN09G3353 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.5e-42 176.0 159 61.0
FAN21G1280 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.7e-41 171.8 160 60.0
FAN15G0148 Fragaria x ananassa HOM05D000876 ORTHO05D000285 6.8e-40 167.9 171 58.5
RcHm_v2.0_Chr6g0254701 Rosa chinensis HOM05D000876 ORTHO05D000285 6.8e-40 167.9 162 58.6
FAN02G2707 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.0e-39 166.4 176 58.0
FvH4_6g39920 Fragaria vesca HOM05D000876 ORTHO05D000285 3.4e-39 165.6 176 58.0
FAN07G1275 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.7e-39 164.9 176 57.4
FAN09G4256 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.5e-39 164.5 176 58.0
FAN17G0428 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.5e-39 164.5 176 58.0
RcHm_v2.0_Chr2g0103961 Rosa chinensis HOM05D000876 ORTHO05D000285 7.5e-39 164.5 162 58.0
FvH4_7g08972 Fragaria vesca HOM05D000876 ORTHO05D000285 1.3e-38 163.7 176 57.4
FAN08G3019 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.3e-38 163.7 182 54.4
FAN03G2155 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.9e-38 162.5 176 56.8
FvH4_7g12221 Fragaria vesca HOM05D000876 ORTHO05D000285 4.9e-38 161.8 176 56.8
FAN02G3048 Fragaria x ananassa HOM05D000876 ORTHO05D000285 8.3e-38 161.0 176 56.2
FAN05G1224 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.4e-37 159.5 176 56.2
FAN23G0201 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.4e-37 158.3 176 56.2
FAN23G2351 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.4e-37 158.3 176 56.2
FAN22G0137 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.2e-37 157.5 176 56.2
FvH4_2g31320 Fragaria vesca HOM05D000876 ORTHO05D022651 3.9e-35 152.1 173 56.1
FAN09G1076 Fragaria x ananassa HOM05D000001 ORTHO05D000003 6.2e-33 144.8 164 56.7
FAN26G1613 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.3e-30 137.1 164 49.4
FAN05G3178 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.7e-30 136.7 175 49.1
FAN05G4669 Fragaria x ananassa HOM05D000876 ORTHO05D000285 8.3e-30 134.4 175 48.0
FAN19G2459 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.1e-29 134.0 175 48.0
FvH4_4g20923 Fragaria vesca HOM05D000876 ORTHO05D000285 2.4e-29 132.9 142 56.3
FAN12G2878 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.7e-28 129.4 175 48.0
Prupe.5G207000 Prunus persica HOM05D000876 ORTHO05D000285 2.3e-24 116.3 176 43.2
Prupe.5G020800 Prunus persica HOM05D000876 ORTHO05D000285 6.8e-24 114.8 176 42.6
Prupe.8G016500 Prunus persica HOM05D000876 ORTHO05D000285 9.8e-23 110.9 194 38.7
FAN21G3184 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.9e-21 106.7 74 78.4
RcHm_v2.0_Chr4g0428601 Rosa chinensis HOM05D000876 ORTHO05D000285 4.1e-21 105.5 182 41.8
FAN17G2644 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.1e-21 104.8 178 40.4
FAN04G1353 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.2e-20 104.0 135 51.9
FAN17G2734 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.8e-20 101.3 178 39.3
FAN14G5489 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.7e-19 100.1 164 40.9
FAN05G0722 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.3e-18 95.9 172 37.8
FvH4_6g53022 Fragaria vesca HOM05D000876 ORTHO05D000285 9.5e-18 94.4 90 57.8
CANSAT11G0869 Cannabis sativa HOM05D000876 ORTHO05D000285 1.6e-17 93.6 183 33.9
CANSAT64G0985 Cannabis sativa HOM05D000876 ORTHO05D000285 1.6e-17 93.6 183 33.9
FvH4_7g00070 Fragaria vesca HOM05D000876 ORTHO05D000285 1.6e-17 93.6 154 39.0
CANSAT78G0895 Cannabis sativa HOM05D000876 ORTHO05D000285 2.1e-17 93.2 183 32.8
FvH4_3g21471 Fragaria vesca HOM05D000034 ORTHO05D000285 2.1e-17 93.2 169 40.8
FAN01G3048 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.8e-17 92.8 84 63.1
FAN06G3321 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.6e-17 92.4 169 37.9
FAN02G2262 Fragaria x ananassa HOM05D000876 ORTHO05D000285 6.2e-17 91.7 124 44.4
RcHm_v2.0_Chr7g0199281 Rosa chinensis HOM05D000876 ORTHO05D000285 8.1e-17 91.3 164 39.0
CANSAT25G2261 Cannabis sativa HOM05D000876 ORTHO05D000285 1.1e-16 90.9 183 32.2
CANSAT11G0810 Cannabis sativa HOM05D000876 ORTHO05D000285 1.8e-16 90.1 183 32.2
FAN10G2724 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.8e-16 90.1 140 40.7
FAN22G0382 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.8e-16 90.1 144 43.8
MD15G1314200 Malus domestica HOM05D000876 ORTHO05D000285 1.8e-16 90.1 176 35.8
Atru.chr5.1610 Acer truncatum HOM05D000034 ORTHO05D000037 2.3e-16 89.7 90 53.3
CANSAT21G2246 Cannabis sativa HOM05D000876 ORTHO05D000285 2.3e-16 89.7 183 31.7
RcHm_v2.0_Chr5g0029731 Rosa chinensis HOM05D000876 ORTHO05D000285 5.2e-16 88.6 84 57.1
CANSAT21G1745 Cannabis sativa HOM05D000876 ORTHO05D000285 1.2e-15 87.4 183 31.1
FAN25G1382 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.6e-15 84.7 120 46.7
FAN14G5115 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.7e-14 83.6 124 46.0
FAN05G3579 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.2e-14 83.2 160 37.5
FAN08G0806 Fragaria x ananassa HOM05D000876 ORTHO05D000285 6.4e-14 81.6 142 38.0
FAN21G2068 Fragaria x ananassa HOM05D000876 ORTHO05D000285 8.4e-14 81.3 85 49.4
Prupe.4G113600 Prunus persica HOM05D000876 ORTHO05D000285 5.4e-13 78.6 142 37.3
FAN04G0891 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.2e-13 77.8 63 66.7
FAN07G1771 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.7e-11 73.6 73 60.3
FAN04G2125 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.3e-11 73.2 90 50.0
FAN10G3635 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.0e-11 72.8 69 56.5
FAN21G2190 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.1e-11 72.0 125 40.0
FAN05G4445 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.3e-10 68.9 130 36.9
MD00G1175400 Malus domestica HOM05D018741 ORTHO05D020857 4.3e-10 68.9 116 40.5
QL04p079613 Quercus lobata HOM05D000876 ORTHO05D000285 7.3e-10 68.2 164 32.9
MD06G1090800 Malus domestica HOM05D000876 ORTHO05D000285 9.6e-10 67.8 98 42.9
CANSAT56G2973 Cannabis sativa HOM05D000876 ORTHO05D000285 1.2e-09 67.4 160 31.2
FAN10G2634 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.2e-09 67.4 101 43.6
CANSAT78G1247 Cannabis sativa HOM05D000876 ORTHO05D000285 2.1e-09 66.6 167 31.7
QL02p025824 Quercus lobata HOM05D013302 ORTHO05D015047 2.8e-09 66.2 80 40.0
FAN02G2626 Fragaria x ananassa HOM05D007761 ORTHO05D000285 3.6e-09 65.9 117 41.0
FAN10G3740 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.7e-09 65.5 80 48.8
FAN14G3310 Fragaria x ananassa HOM05D000876 ORTHO05D046130 4.7e-09 65.5 69 46.4
FAN10G3448 Fragaria x ananassa HOM05D000876 ORTHO05D012261 6.2e-09 65.1 76 55.3
QL05p031161 Quercus lobata HOM05D000034 ORTHO05D000037 1.1e-08 64.3 164 32.9
arahy.Tifrunner.gnm1.ann1.D3784E Arachis hypogaea HOM05D000034 ORTHO05D000037 2.4e-08 63.2 169 29.6
FAN10G3852 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.4e-08 63.2 87 46.0
MD10G1322800 Malus domestica HOM05D018741 ORTHO05D020857 2.4e-08 63.2 116 37.9
arahy.Tifrunner.gnm1.ann1.NV9TN2 Arachis hypogaea HOM05D000034 ORTHO05D000037 3.1e-08 62.8 173 28.9
QL08p029247 Quercus lobata HOM05D013302 ORTHO05D015047 3.1e-08 62.8 164 31.7
Atru.chr7.239 Acer truncatum HOM05D000034 ORTHO05D000037 4.0e-08 62.4 178 31.5
CANSAT11G2698 Cannabis sativa HOM05D000876 ORTHO05D000285 4.0e-08 62.4 183 26.8
CANSAT35G0018 Cannabis sativa HOM05D000876 ORTHO05D000285 4.0e-08 62.4 163 28.8
FAN10G0055 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.0e-08 62.4 101 41.6
FAN21G0561 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.0e-08 62.4 131 38.2
MD07G1217100 Malus domestica HOM05D018741 ORTHO05D020857 6.8e-08 61.6 59 50.8
arahy.Tifrunner.gnm1.ann1.T11VTH Arachis hypogaea HOM05D000034 ORTHO05D000037 8.9e-08 61.2 164 27.4
Gorai.005G108600 Gossypium raimondii HOM05D000876 ORTHO05D000285 8.9e-08 61.2 170 30.6
Ah.03g141330 Amaranthus hybridus HOM05D000876 ORTHO05D000285 1.2e-07 60.8 122 32.8
Ah.10g031690 Amaranthus hybridus HOM05D000034 ORTHO05D000285 1.2e-07 60.8 122 32.8
FAN26G2716 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.2e-07 60.8 59 54.2
Atru.chr3.1562 Acer truncatum HOM05D000876 ORTHO05D000285 1.5e-07 60.5 190 29.5
Atru.chr3.1584 Acer truncatum HOM05D000876 ORTHO05D000285 1.5e-07 60.5 190 29.5
CANSAT01G0041 Cannabis sativa HOM05D000876 ORTHO05D000285 1.5e-07 60.5 161 30.4
FAN03G1971 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.5e-07 60.5 79 51.9
Gorai.011G116300 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.0e-07 60.1 173 30.6
CSS0033511 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 2.6e-07 59.7 154 27.9
PSO507G0009 Papaver somniferum HOM05D000876 ORTHO05D000285 3.4e-07 59.3 168 24.4
Gorai.002G171500 Gossypium raimondii HOM05D000876 ORTHO05D000285 4.4e-07 58.9 171 32.7
Gorai.004G102900 Gossypium raimondii HOM05D000876 ORTHO05D000285 4.4e-07 58.9 185 27.6
CSS0001395 Camellia sinensis var. sinensis HOM05D021170 ORTHO05D000285 5.8e-07 58.5 159 29.6
Atru.chr11.998 Acer truncatum HOM05D000876 ORTHO05D000285 7.6e-07 58.2 169 27.8
MD05G1346000 Malus domestica HOM05D018741 ORTHO05D020857 9.9e-07 57.8 115 36.5
Hund23719 Selenicereus undatus HOM05D000876 ORTHO05D000285 9.9e-07 57.8 137 29.2
Atru.chr10.824 Acer truncatum HOM05D000876 ORTHO05D000285 1.7e-06 57.0 160 28.1
CANSAT64G0872 Cannabis sativa HOM05D000876 ORTHO05D000285 1.7e-06 57.0 144 26.4
Gorai.007G271200 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.7e-06 57.0 170 30.6
Gorai.011G173800 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.7e-06 57.0 170 30.0
CsaV3_5G004940 Cucumis sativus L. HOM05D000876 ORTHO05D000285 2.2e-06 56.6 104 33.7
FAN16G1569 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.2e-06 56.6 46 58.7
FAN21G2291 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.2e-06 56.6 55 60.0
Gorai.006G019900 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.2e-06 56.6 187 26.7
Gorai.010G149000 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.2e-06 56.6 187 27.8
Cfa010584 Carpinus fangiana HOM05D013302 ORTHO05D015047 2.9e-06 56.2 101 30.7
Cfa013205 Carpinus fangiana HOM05D013302 ORTHO05D015047 2.9e-06 56.2 101 30.7
Thecc.05G288300 Theobroma cacao HOM05D000876 ORTHO05D000285 2.9e-06 56.2 138 32.6
FAN14G4311 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.8e-06 55.8 124 32.3
Gorai.013G094800 Gossypium raimondii HOM05D000876 ORTHO05D000285 3.8e-06 55.8 199 27.6
Hund14971 Selenicereus undatus HOM05D000876 ORTHO05D000285 3.8e-06 55.8 114 28.9
arahy.Tifrunner.gnm1.ann1.01IP25 Arachis hypogaea HOM05D000034 ORTHO05D000037 4.9e-06 55.5 105 34.3
arahy.Tifrunner.gnm1.ann1.AG0B9Q Arachis hypogaea HOM05D000034 ORTHO05D000285 4.9e-06 55.5 105 35.2
Gorai.007G190400 Gossypium raimondii HOM05D000876 ORTHO05D000285 4.9e-06 55.5 194 27.3
Glyma.09G090801 Glycine max HOM05D000876 ORTHO05D000285 6.4e-06 55.1 171 29.8
Gorai.002G171600 Gossypium raimondii HOM05D000876 ORTHO05D000285 6.4e-06 55.1 183 29.5
Hund08681 Selenicereus undatus HOM05D000876 ORTHO05D000285 6.4e-06 55.1 127 27.6
arahy.Tifrunner.gnm1.ann1.M8N6J9 Arachis hypogaea HOM05D000876 ORTHO05D000285 8.4e-06 54.7 105 34.3
arahy.Tifrunner.gnm1.ann1.PEG6DJ Arachis hypogaea HOM05D000034 ORTHO05D000037 8.4e-06 54.7 105 34.3
Glyma.02G166900 Glycine max HOM05D000876 ORTHO05D000285 8.4e-06 54.7 157 31.2
Sed0005915 Sechium edule HOM05D000876 ORTHO05D000285 8.4e-06 54.7 123 31.7


User provided reference genes

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