Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G2398 Fragaria x ananassa HOM05D000401 ORTHO05D000252 7.9e-133 477.2 264 100.0
FAN11G2093 Fragaria x ananassa HOM05D000401 ORTHO05D000252 1.9e-126 456.1 253 99.2
FvH4_3g07180 Fragaria vesca HOM05D000401 ORTHO05D000252 4.6e-125 451.4 253 98.4
FAN21G0730 Fragaria x ananassa HOM05D000401 ORTHO05D000252 3.3e-123 445.3 253 93.7
FAN21G1253 Fragaria x ananassa HOM05D000401 ORTHO05D000252 3.3e-123 445.3 253 93.7
FAN25G1799 Fragaria x ananassa HOM05D000401 ORTHO05D000252 1.4e-121 439.9 262 91.2
FAN16G0940 Fragaria x ananassa HOM05D000401 ORTHO05D000252 9.7e-115 417.2 254 93.3
FvH4_3g07200 Fragaria vesca HOM05D000401 ORTHO05D000252 1.1e-110 403.7 264 86.7
RcHm_v2.0_Chr5g0011951 Rosa chinensis HOM05D000401 ORTHO05D000252 8.5e-103 377.5 253 82.6
Prupe.4G068000 Prunus persica HOM05D000401 ORTHO05D000252 9.8e-59 231.1 289 56.7
MD00G1007900 Malus domestica HOM05D000401 ORTHO05D000252 2.9e-50 203.0 282 50.7
MD10G1274500 Malus domestica HOM05D000401 ORTHO05D000252 1.0e-47 194.5 287 51.9
Haze_05370 Corylus avellana HOM05D000401 ORTHO05D000252 1.6e-32 144.1 295 39.3
CSS0033023 Camellia sinensis var. sinensis HOM05D000401 ORTHO05D000252 2.5e-22 110.2 293 36.5
Dinv12741 Davidia involucrata HOM05D000401 ORTHO05D000252 7.4e-22 108.6 265 41.1
Atru.chr10.1530 Acer truncatum HOM05D000401 ORTHO05D000252 1.3e-21 107.8 323 32.8
TWI09G0061 Tripterygium wilfordii HOM05D000401 ORTHO05D000252 1.3e-21 107.8 301 36.2
Actinidia07654 Actinidia chinensis HOM05D000401 ORTHO05D000252 3.7e-21 106.3 278 37.8
Rhsim02G0148100 Rhododendron simsii HOM05D000401 ORTHO05D000252 4.8e-21 105.9 314 36.0
Ciclev10017829m.g Citrus clementina HOM05D000401 ORTHO05D000252 9.0e-20 101.7 265 37.4
MELO3C007193.2 Cucumis melo HOM05D000401 ORTHO05D000252 5.8e-19 99.0 341 32.0
QL05p050214 Quercus lobata HOM05D000401 ORTHO05D000252 1.7e-18 97.4 324 33.6
CiPaw.09G136600 Carya illinoinensis HOM05D000401 ORTHO05D000252 6.5e-18 95.5 308 32.5
Potri.004G062100 Populus trichocarpa HOM05D000401 ORTHO05D000252 8.4e-18 95.1 311 32.5
TAR629G2263 Trochodendron aralioides HOM05D000401 ORTHO05D000252 2.1e-16 90.5 346 29.5
Glyma.05G162200 Glycine max HOM05D000401 ORTHO05D000252 6.0e-16 89.0 299 31.4
ClCG01G023970 Citrullus lanatus HOM05D000401 ORTHO05D000252 1.3e-15 87.8 340 32.1
Thecc.06G164200 Theobroma cacao HOM05D000401 ORTHO05D000252 1.3e-15 87.8 273 33.0
Phvul.002G241900 Phaseolus vulgaris HOM05D000401 ORTHO05D000252 3.0e-15 86.7 297 35.0
CSS0022682 Camellia sinensis var. sinensis HOM05D000401 ORTHO05D000252 5.1e-15 85.9 219 39.7
Manes.17G060500 Manihot esculenta HOM05D000401 ORTHO05D000252 5.1e-15 85.9 324 30.6
Peaxi162Scf00112g00092 Petunia axillaris HOM05D000401 ORTHO05D000252 6.7e-15 85.5 276 35.1
Glyma.08G119800 Glycine max HOM05D000401 ORTHO05D000252 8.7e-15 85.1 302 33.1
Nn6g34460 Nelumbo nucifera HOM05D000401 ORTHO05D000252 1.5e-14 84.3 355 30.4
VMungo0251G2474 Vigna mungo HOM05D000401 ORTHO05D000252 1.5e-14 84.3 296 32.1
Sabra04G0041200 Salix brachista HOM05D000401 ORTHO05D000252 1.9e-14 84.0 306 32.0
CsaV3_6G051110 Cucumis sativus L. HOM05D000401 ORTHO05D000252 5.7e-14 82.4 340 30.3
CANSAT35G1814 Cannabis sativa HOM05D000401 ORTHO05D000252 2.8e-13 80.1 268 33.2
Nn3g21077 Nelumbo nucifera HOM05D000401 ORTHO05D000252 6.3e-13 79.0 368 28.8
CSS0048478 Camellia sinensis var. sinensis HOM05D000401 ORTHO05D000252 1.4e-12 77.8 248 33.5
Nitab4.5_0008128g0010 Nicotiana tabacum HOM05D000401 ORTHO05D000252 1.4e-12 77.8 286 31.1
Sed0017173 Sechium edule HOM05D000401 ORTHO05D000252 1.4e-12 77.8 329 32.8
Actinidia39524 Actinidia chinensis HOM05D001195 ORTHO05D001138 4.1e-12 76.3 263 35.7
COL.COLO4_31217 Corchorus olitorius HOM05D000401 ORTHO05D000252 9.0e-12 75.1 321 29.3
Manes.16G038730 Manihot esculenta HOM05D000401 ORTHO05D000252 9.0e-12 75.1 181 39.2
Duzib235G1366 Durio zibethinus HOM05D000401 ORTHO05D000252 1.0e-10 71.6 327 30.0
Oeu040928.1 Olea europaea HOM05D000401 ORTHO05D000252 2.9e-10 70.1 314 30.9
TPR.G39845 Trifolium pratense HOM05D000401 ORTHO05D000252 1.2e-08 64.7 272 29.4
Sed0016370 Sechium edule HOM05D000401 ORTHO05D000252 2.1e-08 63.9 121 39.7
PGSC0003DMG400028460 Solanum tuberosum HOM05D000401 ORTHO05D000252 2.1e-08 63.9 300 30.7
Cpa.g.sc124.6 Carica papaya HOM05D000401 ORTHO05D000252 1.3e-07 61.2 291 28.5
Medtr8g087530 Medicago truncatula HOM05D000401 ORTHO05D000252 5.1e-07 59.3 179 35.2
Psat7g067760 Pisum sativum HOM05D000401 ORTHO05D000252 5.1e-07 59.3 201 30.3
CAN.G411.36 Capsicum annuum HOM05D000401 ORTHO05D000252 6.7e-07 58.9 310 30.3
TAR627G0369 Trochodendron aralioides HOM05D000401 ORTHO05D000252 6.7e-07 58.9 309 27.2
Lj4g0000814 Lotus japonicus HOM05D000401 ORTHO05D000252 1.9e-06 57.4 275 33.5
Oeu042429.1 Olea europaea HOM05D000401 ORTHO05D000252 7.4e-06 55.5 303 31.7


User provided reference genes

Program Settings