Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 1.7e-49 199.1 106 100.0
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.7e-49 199.1 106 100.0
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 4.8e-49 197.6 106 99.1
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 2.4e-48 195.3 106 98.1
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 3.1e-48 194.9 106 98.1
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 1.0e-43 179.9 104 93.3
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 1.5e-42 176.0 104 91.3
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 5.0e-38 161.0 104 79.8
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 2.5e-37 158.7 99 82.8
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 2.5e-37 158.7 104 77.9
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 4.3e-37 157.9 104 79.8
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 4.3e-37 157.9 104 81.7
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 5.6e-37 157.5 101 81.2
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 2.1e-36 155.6 99 81.8
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 2.8e-36 155.2 101 80.2
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 6.1e-36 154.1 99 80.8
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 8.0e-36 153.7 104 77.9
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 8.0e-36 153.7 99 80.8
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 8.0e-36 153.7 99 79.8
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 1.4e-35 152.9 99 80.8
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 1.8e-35 152.5 104 77.9
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 1.8e-35 152.5 101 78.2
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 1.8e-35 152.5 100 79.0
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 4.0e-35 151.4 104 76.0
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 4.0e-35 151.4 102 78.4
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 6.8e-35 150.6 101 77.2
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 8.9e-35 150.2 97 80.4
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 1.2e-34 149.8 99 77.8
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 1.2e-34 149.8 102 76.5
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 2.0e-34 149.1 101 77.2
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 2.0e-34 149.1 99 78.8
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 2.6e-34 148.7 99 76.8
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 3.4e-34 148.3 99 75.8
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 3.4e-34 148.3 104 76.9
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 3.4e-34 148.3 99 77.8
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 4.4e-34 147.9 102 77.5
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 5.7e-34 147.5 99 76.8
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 5.7e-34 147.5 100 76.0
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 9.8e-34 146.7 102 75.5
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 1.7e-33 146.0 102 76.5
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 1.7e-33 146.0 99 74.7
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 1.7e-33 146.0 98 77.6
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 2.2e-33 145.6 99 74.7
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 2.2e-33 145.6 98 76.5
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 2.9e-33 145.2 102 72.5
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 3.7e-33 144.8 97 77.3
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 4.9e-33 144.4 100 72.0
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 4.9e-33 144.4 99 75.8
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 6.4e-33 144.1 101 74.3
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 6.4e-33 144.1 99 72.7
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 8.3e-33 143.7 101 74.3
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 1.1e-32 143.3 99 74.7
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 1.1e-32 143.3 99 72.7
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 1.8e-32 142.5 99 72.7
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 1.8e-32 142.5 99 72.7
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 1.8e-32 142.5 99 72.7
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 1.8e-32 142.5 99 72.7
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 2.4e-32 142.1 102 74.5
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 2.4e-32 142.1 102 72.5
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 2.4e-32 142.1 102 72.5
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 3.2e-32 141.7 99 71.7
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 5.4e-32 141.0 99 72.7
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 5.4e-32 141.0 99 71.7
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 7.0e-32 140.6 105 73.3
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 7.0e-32 140.6 97 72.2
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 7.0e-32 140.6 102 72.5
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 7.0e-32 140.6 102 72.5
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 7.0e-32 140.6 103 72.8
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 9.2e-32 140.2 102 71.6
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 9.2e-32 140.2 97 73.2
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 1.2e-31 139.8 99 71.7
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 1.2e-31 139.8 102 71.6
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 1.2e-31 139.8 102 71.6
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 2.0e-31 139.0 117 67.5
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 2.7e-31 138.7 97 74.2
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 2.7e-31 138.7 100 70.0
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 3.5e-31 138.3 99 70.7
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 4.6e-31 137.9 99 69.7
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 5.9e-31 137.5 102 70.6
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 5.9e-31 137.5 99 70.7
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 7.8e-31 137.1 97 72.2
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 7.8e-31 137.1 105 70.5
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 2.3e-30 135.6 99 69.7
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 3.0e-30 135.2 100 72.0
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 5.0e-30 134.4 100 70.0
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 6.6e-30 134.0 105 69.5
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 6.6e-30 134.0 105 70.5
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 1.1e-29 133.3 100 68.0
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 3.3e-29 131.7 97 72.2
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 7.3e-29 130.6 101 66.3
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 1.6e-28 129.4 97 68.0
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 2.1e-28 129.0 100 67.0
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 2.8e-28 128.6 99 65.7
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 4.7e-28 127.9 104 63.5
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 6.2e-28 127.5 97 70.1
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 6.2e-28 127.5 104 64.4
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 1.4e-27 126.3 105 63.8
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 1.4e-27 126.3 105 63.8
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 2.0e-26 122.5 78 84.6
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 2.9e-25 118.6 94 68.1
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 6.4e-25 117.5 154 50.0
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 1.1e-24 116.7 76 82.9
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 1.1e-24 116.7 101 65.3
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 1.6e-23 112.8 99 56.6
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 2.0e-23 112.5 79 74.7
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 2.0e-23 112.5 78 76.9
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 2.0e-23 112.5 77 76.6
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 3.5e-23 111.7 104 55.8
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 3.5e-23 111.7 79 73.4
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 7.8e-23 110.5 81 76.5
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 1.0e-22 110.2 105 55.2
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 1.7e-22 109.4 81 74.1
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 6.2e-20 100.9 94 55.3
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 1.1e-19 100.1 74 68.9
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 1.4e-19 99.8 74 71.6
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 1.8e-19 99.4 76 68.4
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 1.8e-19 99.4 173 38.2
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 5.2e-19 97.8 80 68.8
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 4.4e-18 94.7 76 68.4
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 1.3e-17 93.2 54 90.7
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 4.1e-16 88.2 99 48.5
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 2.7e-15 85.5 90 48.9
BcaC07g40760 Brassica carinata HOM05D002674 ORTHO05D008041 7.3e-13 77.4 52 69.2
BolC8t51336H Brassica oleracea HOM05D002674 ORTHO05D008041 7.3e-13 77.4 52 69.2
CBR_g24042 Chara braunii HOM05D002674 ORTHO05D008041 4.9e-09 64.7 93 37.6
Cre07.g332150 Chlamydomonas reinhardtii HOM05D002674 ORTHO05D008041 1.1e-08 63.5 81 39.5
Peaxi162Scf00545g00027 Petunia axillaris HOM05D002674 ORTHO05D008041 2.1e-07 59.3 67 50.7
PSO832G3862 Papaver somniferum HOM05D001297 ORTHO05D001135 2.7e-07 58.9 77 48.1
MCO07G465 Micromonas commoda HOM05D002674 ORTHO05D008041 6.6e-06 54.3 102 33.3


User provided reference genes

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