Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_3g39470 Fragaria vesca HOM05D004936 ORTHO05D005977 1.1e-87 326.6 168 100.0
FAN11G2192 Fragaria x ananassa HOM05D004936 ORTHO05D005977 1.1e-87 326.6 168 100.0
FAN21G3073 Fragaria x ananassa HOM05D004936 ORTHO05D005977 1.1e-87 326.6 168 100.0
FAN16G3562 Fragaria x ananassa HOM05D004936 ORTHO05D005977 3.2e-87 325.1 168 99.4
RcHm_v2.0_Chr5g0071211 Rosa chinensis HOM05D004936 ORTHO05D005977 2.8e-75 285.4 168 85.7
FAN25G3861 Fragaria x ananassa HOM05D004936 ORTHO05D005977 8.1e-75 283.9 143 100.0
GSVIVG01024670001 Vitis vinifera HOM05D004936 ORTHO05D005977 2.5e-68 262.3 165 78.2
Migut.G00331 Erythranthe guttata HOM05D004936 ORTHO05D005977 1.2e-65 253.4 163 76.1
CSS0031896 Camellia sinensis var. sinensis HOM05D004936 ORTHO05D005977 3.8e-64 248.4 164 71.3
CSS0046409 Camellia sinensis var. sinensis HOM05D004936 ORTHO05D005977 3.8e-64 248.4 164 71.3
TAR636G1077 Trochodendron aralioides HOM05D004936 ORTHO05D005977 8.4e-64 247.3 167 71.3
Ciclev10029395m.g Citrus clementina HOM05D004936 ORTHO05D005977 2.5e-63 245.7 164 72.6
THA.LOC104812175 Tarenaya hassleriana HOM05D004936 ORTHO05D005977 7.2e-63 244.2 149 78.5
Eucgr.K02762 Eucalyptus grandis HOM05D004936 ORTHO05D005977 1.2e-62 243.4 165 70.9
HanXRQChr14g0439861 Helianthus annuus HOM05D004936 ORTHO05D005977 1.6e-62 243.0 175 70.9
Hma1.2p1_0146F.1_g065480 Hydrangea macrophylla HOM05D004936 ORTHO05D005977 2.1e-62 242.7 168 70.2
Potri.009G076400 Populus trichocarpa HOM05D004936 ORTHO05D005977 4.6e-62 241.5 162 73.5
AL1G30690 Arabidopsis lyrata HOM05D004936 ORTHO05D005977 1.0e-61 240.4 151 75.5
C08p43440 Brassica napus HOM05D004936 ORTHO05D005977 1.0e-61 240.4 167 71.3
BolC8t51892H Brassica oleracea HOM05D004936 ORTHO05D005977 1.0e-61 240.4 167 71.3
Gohir.A12G269500 Gossypium hirsutum HOM05D004936 ORTHO05D005977 1.0e-61 240.4 159 74.8
Medtr4g077950 Medicago truncatula HOM05D004936 ORTHO05D005977 1.3e-61 240.0 172 69.2
BcaC07g41334 Brassica carinata HOM05D004936 ORTHO05D005977 1.8e-61 239.6 151 75.5
Potri.001G281200 Populus trichocarpa HOM05D004936 ORTHO05D005977 1.8e-61 239.6 155 74.2
A08p30450 Brassica napus HOM05D004936 ORTHO05D005977 2.3e-61 239.2 151 75.5
A09p59990 Brassica napus HOM05D004936 ORTHO05D005977 2.3e-61 239.2 167 70.7
BraA08t34977Z Brassica rapa HOM05D004936 ORTHO05D005977 2.3e-61 239.2 168 70.8
BraA09t41369Z Brassica rapa HOM05D004936 ORTHO05D005977 2.3e-61 239.2 167 70.7
CiPaw.13G071600 Carya illinoinensis HOM05D004936 ORTHO05D005977 2.3e-61 239.2 165 70.9
Gohir.D12G270000 Gossypium hirsutum HOM05D004936 ORTHO05D005977 2.3e-61 239.2 163 73.0
Gorai.008G290300 Gossypium raimondii HOM05D004936 ORTHO05D005977 2.3e-61 239.2 164 72.6
Thhalv10008922m.g Eutrema salsugineum HOM05D004936 ORTHO05D005977 3.0e-61 238.8 165 70.3
Manes.03G100200 Manihot esculenta HOM05D004936 ORTHO05D005977 3.0e-61 238.8 164 72.0
Aa31LG7G2800 Aethionema arabicum HOM05D004936 ORTHO05D005977 3.9e-61 238.4 170 69.4
Medtr2g070380 Medicago truncatula HOM05D004936 ORTHO05D005977 3.9e-61 238.4 172 69.2
Carub.0001s1794 Capsella rubella HOM05D004936 ORTHO05D005977 5.1e-61 238.0 151 74.8
SalBow5G1663 Salvia bowleyana HOM05D004936 ORTHO05D005977 5.1e-61 238.0 160 71.9
Hund18959 Selenicereus undatus HOM05D004936 ORTHO05D005977 5.1e-61 238.0 149 75.2
Atru.chr3.4141 Acer truncatum HOM05D004936 ORTHO05D005977 8.7e-61 237.3 169 72.8
BcaC07g38896 Brassica carinata HOM05D004936 ORTHO05D005977 1.1e-60 236.9 168 70.2
C08p18520 Brassica napus HOM05D004936 ORTHO05D005977 1.1e-60 236.9 168 70.2
BolC8t49484H Brassica oleracea HOM05D004936 ORTHO05D005977 1.1e-60 236.9 168 70.2
arahy.Tifrunner.gnm1.ann1.K3S5GW Arachis hypogaea HOM05D004936 ORTHO05D005977 1.5e-60 236.5 171 71.3
arahy.Tifrunner.gnm1.ann1.Z0D2FZ Arachis hypogaea HOM05D004936 ORTHO05D005977 1.5e-60 236.5 171 71.3
Sp1g16280 Schrenkiella parvula HOM05D004936 ORTHO05D005977 1.5e-60 236.5 165 69.7
Manes.15G096000 Manihot esculenta HOM05D004936 ORTHO05D005977 1.9e-60 236.1 164 71.3
Aqoxy1G01790 Aquilegia oxysepala HOM05D004936 ORTHO05D005977 4.3e-60 235.0 169 69.2
DCAR_018221 Daucus carota HOM05D004936 ORTHO05D005977 1.3e-59 233.4 165 70.9
BcaB03g12974 Brassica carinata HOM05D004936 ORTHO05D005977 2.2e-59 232.6 151 72.2
BcaNung05441 Brassica carinata HOM05D004936 ORTHO05D005977 2.2e-59 232.6 151 72.2
Duzib068G0913 Durio zibethinus HOM05D004936 ORTHO05D005977 4.8e-59 231.5 169 69.8
CDE06G1927 Ceratophyllum demersum HOM05D004936 ORTHO05D005977 1.4e-58 229.9 166 66.9
QL01p039898 Quercus lobata HOM05D004936 ORTHO05D005977 1.4e-58 229.9 164 68.3
Lsat_1_v5_gn_2_60241 Lactuca sativa HOM05D004936 ORTHO05D005977 1.8e-58 229.6 157 74.5
Rhsim13G0065400 Rhododendron simsii HOM05D004936 ORTHO05D005977 1.8e-58 229.6 166 66.9
EL10Ac7g15900 Beta vulgaris HOM05D004936 ORTHO05D005977 2.4e-58 229.2 170 65.3
Prupe.6G051100 Prunus persica HOM05D004936 ORTHO05D005977 2.4e-58 229.2 168 69.6
Sed0012478 Sechium edule HOM05D004936 ORTHO05D005977 3.1e-58 228.8 158 74.1
CANSAT54G2258 Cannabis sativa HOM05D004936 ORTHO05D005977 5.3e-58 228.0 165 69.1
AUR62009688 Chenopodium quinoa HOM05D004936 ORTHO05D005977 9.0e-58 227.3 152 69.1
unitig_736.g22495 Utricularia gibba HOM05D004936 ORTHO05D005977 1.2e-57 226.9 148 70.9
Ah.15g096180 Amaranthus hybridus HOM05D004936 ORTHO05D005977 1.5e-57 226.5 168 65.5
HPP92_003695 Vanilla planifolia HOM05D004936 ORTHO05D005977 1.5e-57 226.5 161 69.6
Zm00001eb013690 Zea mays HOM05D004936 ORTHO05D005977 1.5e-57 226.5 150 70.7
Actinidia23210 Actinidia chinensis HOM05D004936 ORTHO05D005977 5.9e-57 224.6 150 72.7
Lalb_Chr03g0024401 Lupinus albus HOM05D004936 ORTHO05D005977 5.9e-57 224.6 157 73.2
Os03g0296300 Oryza sativa ssp. japonica HOM05D004936 ORTHO05D005977 1.0e-56 223.8 168 64.3
VMungo1127G0545 Vigna mungo HOM05D004936 ORTHO05D005977 1.0e-56 223.8 166 68.7
CARHR018890 Cardamine hirsuta HOM05D004936 ORTHO05D005977 1.3e-56 223.4 147 70.7
AUR62001892 Chenopodium quinoa HOM05D004936 ORTHO05D005977 1.7e-56 223.0 152 69.1
COL.COLO4_31393 Corchorus olitorius HOM05D004936 ORTHO05D005977 1.7e-56 223.0 165 65.5
Phvul.011G019700 Phaseolus vulgaris HOM05D004936 ORTHO05D005977 3.8e-56 221.9 165 68.5
Dinv28681 Davidia involucrata HOM05D004936 ORTHO05D005977 6.5e-56 221.1 165 66.1
Glyma.12G017200 Glycine max HOM05D004936 ORTHO05D005977 6.5e-56 221.1 171 66.7
Cc05_g03440 Coffea canephora HOM05D004936 ORTHO05D005977 1.9e-55 219.5 164 64.6
PGR044G1703 Punica granatum HOM05D004936 ORTHO05D005977 3.2e-55 218.8 152 69.1
Glyma.09G223900 Glycine max HOM05D004936 ORTHO05D005977 5.5e-55 218.0 171 66.1
Thecc.03G057900 Theobroma cacao HOM05D004936 ORTHO05D005977 5.5e-55 218.0 165 67.3
SGA_v2.0_scaffold39G15257 Striga asiatica HOM05D004936 ORTHO05D005977 1.2e-54 216.9 168 66.1
Psat7g170640 Pisum sativum HOM05D004936 ORTHO05D005977 1.6e-54 216.5 163 65.6
ECA238G2024 Erigeron canadensis HOM05D004936 ORTHO05D005977 2.1e-54 216.1 148 69.6
MSTRG.4026 Avicennia marina HOM05D004936 ORTHO05D005977 2.7e-54 215.7 165 66.1
TWI79G0082 Tripterygium wilfordii HOM05D004936 ORTHO05D005977 3.6e-54 215.3 169 66.3
Duzib084G0838 Durio zibethinus HOM05D004936 ORTHO05D005977 4.6e-54 214.9 163 64.4
PSO832G3733 Papaver somniferum HOM05D004936 ORTHO05D005977 4.6e-54 214.9 156 64.7
Lj2A1091T51 Lonicera japonica HOM05D004936 ORTHO05D005977 6.1e-54 214.5 153 67.3
CiPaw.14G055600 Carya illinoinensis HOM05D004936 ORTHO05D005977 1.0e-53 213.8 143 72.7
vmacro02929 Vaccinium macrocarpon HOM05D004936 ORTHO05D005977 1.0e-53 213.8 212 51.9
PSO210G4578 Papaver somniferum HOM05D004936 ORTHO05D005977 1.8e-53 213.0 156 64.1
MELO3C020507.2 Cucumis melo HOM05D004936 ORTHO05D005977 2.3e-53 212.6 150 70.0
PGSC0003DMG402019636 Solanum tuberosum HOM05D004936 ORTHO05D005977 2.3e-53 212.6 164 64.0
CsaV3_1G036620 Cucumis sativus L. HOM05D004936 ORTHO05D005977 3.0e-53 212.2 150 68.0
Peaxi162Scf00624g00914 Petunia axillaris HOM05D004936 ORTHO05D005977 3.9e-53 211.8 161 65.2
Nitab4.5_0000570g0350 Nicotiana tabacum HOM05D004936 ORTHO05D005977 5.1e-53 211.5 164 64.0
Nitab4.5_0002493g0030 Nicotiana tabacum HOM05D004936 ORTHO05D005977 6.7e-53 211.1 164 63.4
Nitab4.5_0000158g0090 Nicotiana tabacum HOM05D004936 ORTHO05D005977 8.8e-53 210.7 164 63.4
TPR.G39486 Trifolium pratense HOM05D004936 ORTHO05D005977 1.1e-52 210.3 163 63.8
TWI75G1184 Tripterygium wilfordii HOM05D004936 ORTHO05D005977 1.5e-52 209.9 169 63.9
Lj3g0015200 Lotus japonicus HOM05D004936 ORTHO05D005977 2.0e-52 209.5 156 67.3
Solyc11g068980.2 Solanum lycopersicum HOM05D004936 ORTHO05D005977 2.5e-52 209.1 164 62.2
Sopen11g027690 Solanum pennellii HOM05D004936 ORTHO05D005977 2.5e-52 209.1 164 62.2
MD11G1063700 Malus domestica HOM05D004936 ORTHO05D005977 4.8e-51 204.9 137 73.0
SMO353G0176 Selaginella moellendorffii HOM05D004936 ORTHO05D005977 4.8e-51 204.9 167 59.3
Sc12g0000320 Simmondsia chinensis HOM05D004936 ORTHO05D005977 3.4e-49 198.7 118 78.8
Pp3c12_17590 Physcomitrium patens HOM05D004936 ORTHO05D005977 3.2e-47 192.2 146 61.0
Cpa.g.sc2.381 Carica papaya HOM05D004936 ORTHO05D005977 9.4e-47 190.7 136 69.9
Nn2g10980 Nelumbo nucifera HOM05D004936 ORTHO05D005977 2.1e-46 189.5 171 59.1
Sabra16G0174900 Salix brachista HOM05D004936 ORTHO05D005977 2.7e-46 189.1 134 66.4
ClCG03G000300 Citrullus lanatus HOM05D000089 ORTHO05D000104 1.0e-45 187.2 137 69.3
Mapoly0036s0081 Marchantia polymorpha HOM05D004936 ORTHO05D005977 2.3e-45 186.0 142 63.4
SEGI_35825 Sequoiadendron giganteum HOM05D004936 ORTHO05D005977 1.5e-44 183.3 110 81.8
MD03G1061000 Malus domestica HOM05D004936 ORTHO05D005977 1.7e-43 179.9 139 66.9
COL.COLO4_04994 Corchorus olitorius HOM05D000034 ORTHO05D000037 6.3e-43 177.9 133 66.9
AagrBONN_evm.TU.Sc2ySwM_344.4538 Anthoceros agrestis HOM05D004936 ORTHO05D005977 1.2e-41 173.7 166 54.8
Haze_24392 Corylus avellana HOM05D004936 ORTHO05D005977 1.3e-40 170.2 139 61.9
DCAR_027925 Daucus carota HOM05D004936 ORTHO05D005977 3.8e-40 168.7 140 60.7
Ca_18959_v3 Cicer arietinum L. HOM05D000232 ORTHO05D000145 5.0e-40 168.3 134 64.2
Cfa011755 Carpinus fangiana HOM05D000089 ORTHO05D000104 1.1e-39 167.2 136 62.5
Oeu011630.1 Olea europaea HOM05D004936 ORTHO05D005977 7.2e-39 164.5 137 59.1
CAN.G3648.1 Capsicum annuum HOM05D004936 ORTHO05D005977 1.6e-38 163.3 137 59.1
CAN.G689.18 Capsicum annuum HOM05D004936 ORTHO05D005977 1.6e-38 163.3 137 59.1
ATR0691G226 Amborella trichopoda HOM05D004936 ORTHO05D005977 2.7e-38 162.5 165 54.5
Oeu023392.2 Olea europaea HOM05D004936 ORTHO05D005977 2.3e-37 159.5 137 61.3
Nitab4.5_0003484g0120 Nicotiana tabacum HOM05D004936 ORTHO05D005977 8.8e-37 157.5 123 63.4
Lj1A128T43 Lonicera japonica HOM05D004936 ORTHO05D005977 4.4e-36 155.2 138 57.2
CBR_g19040 Chara braunii HOM05D004936 ORTHO05D005977 5.7e-36 154.8 146 50.0
AT3G10110 Arabidopsis thaliana HOM05D004936 ORTHO05D005977 4.1e-34 148.7 100 71.0
TPR.G26511 Trifolium pratense HOM05D004936 ORTHO05D005977 1.7e-32 143.3 96 71.9
CANSAT21G2196 Cannabis sativa HOM05D004936 ORTHO05D005977 1.1e-31 140.6 89 74.2
Zm00001eb130910 Zea mays HOM05D004936 ORTHO05D005977 1.5e-31 140.2 96 67.7
Nn5g31489 Nelumbo nucifera HOM05D004936 ORTHO05D005977 5.5e-31 138.3 127 56.7
Nn6g34585 Nelumbo nucifera HOM05D004936 ORTHO05D005977 5.5e-31 138.3 127 56.7
Dinv09657 Davidia involucrata HOM05D004936 ORTHO05D005977 7.2e-31 137.9 81 81.5
Zm00001eb223780 Zea mays HOM05D004936 ORTHO05D005977 9.4e-31 137.5 96 65.6
Cre01.g021050 Chlamydomonas reinhardtii HOM05D004936 ORTHO05D005977 2.1e-30 136.3 153 48.4
Sed0020346 Sechium edule HOM05D004936 ORTHO05D005977 3.6e-30 135.6 149 55.0
PRCOL_00001564 Prasinoderma coloniale HOM05D004936 ORTHO05D005977 5.7e-28 128.3 159 42.1
MCO05G723 Micromonas commoda HOM05D004936 ORTHO05D005977 1.2e-25 120.6 145 44.1
MD11G1064200 Malus domestica HOM05D004936 ORTHO05D005977 5.0e-24 115.2 64 85.9
Cfa023961 Carpinus fangiana HOM05D004936 ORTHO05D005977 2.1e-22 109.8 140 42.9
TAR633G2185 Trochodendron aralioides HOM05D004936 ORTHO05D005977 1.4e-21 107.1 114 50.0
MD11G1064100 Malus domestica HOM05D004936 ORTHO05D005977 3.0e-21 105.9 82 64.6
Nitab4.5_0001270g0210 Nicotiana tabacum HOM05D004936 ORTHO05D005977 5.0e-16 88.6 105 49.5
TPR.G21432 Trifolium pratense HOM05D004936 ORTHO05D005977 5.9e-09 65.1 86 44.2
Cpa.g.sc2.380 Carica papaya HOM05D004936 ORTHO05D005977 3.3e-07 59.3 31 87.1
MD05G1160000 Malus domestica HOM05D004936 ORTHO05D005977 4.3e-07 58.9 52 59.6
arahy.Tifrunner.gnm1.ann1.6CLX5T Arachis hypogaea HOM05D005939 ORTHO05D026929 9.5e-07 57.8 27 92.6
Dinv09658 Davidia involucrata HOM05D004936 ORTHO05D005977 9.5e-07 57.8 67 46.3
arahy.Tifrunner.gnm1.ann1.BM2UDG Arachis hypogaea HOM05D004936 ORTHO05D086586 2.1e-06 56.6 28 89.3
arahy.Tifrunner.gnm1.ann1.AL6ICI Arachis hypogaea HOM05D005939 ORTHO05D007412 6.2e-06 55.1 28 85.7


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