Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 7.1e-64 247.3 141 100.0
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 8.7e-62 240.4 142 98.6
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 2.3e-54 215.7 141 87.9
FAN16G0402 Fragaria x ananassa HOM05D005932 ORTHO05D006213 4.8e-44 181.4 135 78.5
FAN25G3656 Fragaria x ananassa HOM05D005932 ORTHO05D006213 7.9e-39 164.1 110 85.5
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 9.0e-35 150.6 148 69.6
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 1.5e-26 123.2 129 60.5
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 1.9e-24 116.3 142 55.6
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 2.2e-20 102.8 124 54.8
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 1.5e-18 96.7 134 50.0
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 1.5e-18 96.7 139 44.6
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 1.7e-17 93.2 139 48.2
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 2.2e-17 92.8 120 47.5
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 3.8e-17 92.0 137 43.8
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 1.1e-16 90.5 126 44.4
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 4.2e-16 88.6 134 45.5
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 9.4e-16 87.4 112 48.2
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 9.4e-16 87.4 120 45.8
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 9.4e-16 87.4 139 46.8
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 2.7e-15 85.9 112 47.3
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 3.6e-15 85.5 139 45.3
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 4.7e-15 85.1 139 45.3
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 1.0e-14 84.0 132 41.7
Cfa000817 Carpinus fangiana HOM05D005932 ORTHO05D006213 2.3e-14 82.8 120 48.3
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 2.6e-13 79.3 136 36.0
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 3.3e-13 79.0 117 46.2
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 3.3e-13 79.0 122 42.6
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 4.4e-13 78.6 130 35.4
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 5.7e-13 78.2 121 41.3
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 7.4e-13 77.8 130 40.0
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 7.4e-13 77.8 134 38.1
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 1.3e-12 77.0 127 40.9
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 2.2e-12 76.3 132 43.9
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 2.8e-12 75.9 134 40.3
Haze_05823 Corylus avellana HOM05D005932 ORTHO05D006213 4.8e-12 75.1 135 45.9
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 6.3e-12 74.7 132 43.2
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 6.3e-12 74.7 122 42.6
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 6.3e-12 74.7 141 44.0
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 8.2e-12 74.3 137 38.0
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 1.1e-11 73.9 126 36.5
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 1.1e-11 73.9 136 36.8
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 1.4e-11 73.6 149 34.9
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 2.4e-11 72.8 135 37.8
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 2.4e-11 72.8 136 40.4
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 4.1e-11 72.0 129 38.0
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 4.1e-11 72.0 143 36.4
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 5.3e-11 71.6 134 38.1
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 7.0e-11 71.2 137 35.8
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 2.0e-10 69.7 129 37.2
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 2.0e-10 69.7 136 36.8
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 2.0e-10 69.7 138 41.3
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 3.5e-10 68.9 122 38.5
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 3.5e-10 68.9 129 38.8
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 5.9e-10 68.2 136 37.5
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 1.0e-09 67.4 135 40.7
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 1.3e-09 67.0 113 40.7
Actinidia32363 Actinidia chinensis HOM05D005932 ORTHO05D006213 2.9e-09 65.9 117 41.9
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 2.9e-09 65.9 119 37.8
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 3.8e-09 65.5 134 37.3
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 3.8e-09 65.5 125 37.6
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 5.0e-09 65.1 159 36.5
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 5.0e-09 65.1 119 37.8
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 6.5e-09 64.7 114 40.4
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 6.5e-09 64.7 136 39.7
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 6.5e-09 64.7 117 39.3
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 1.1e-08 63.9 126 32.5
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 1.1e-08 63.9 132 33.3
Peaxi162Scf00395g00004 Petunia axillaris HOM05D005932 ORTHO05D006213 1.5e-08 63.5 138 33.3
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 2.5e-08 62.8 129 34.1
Lalb_Chr18g0057981 Lupinus albus HOM05D005932 ORTHO05D006213 3.2e-08 62.4 127 33.9
Thhalv10009012m.g Eutrema salsugineum HOM05D012212 ORTHO05D006213 7.2e-08 61.2 126 38.9
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 9.4e-08 60.8 107 35.5
ECA238G1329 Erigeron canadensis HOM05D005932 ORTHO05D006213 9.4e-08 60.8 127 37.8
BcaB07g32687 Brassica carinata HOM05D012212 ORTHO05D006213 1.2e-07 60.5 122 37.7
C05p29520 Brassica napus HOM05D012212 ORTHO05D006213 1.2e-07 60.5 122 37.7
BolC5t31682H Brassica oleracea HOM05D012212 ORTHO05D006213 1.2e-07 60.5 122 37.7
Sp7g19900 Schrenkiella parvula HOM05D005932 ORTHO05D006213 1.2e-07 60.5 115 40.9
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 1.6e-07 60.1 120 37.5
Migut.H01328 Erythranthe guttata HOM05D005932 ORTHO05D006213 1.6e-07 60.1 128 37.5
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 2.1e-07 59.7 120 37.5
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 3.6e-07 58.9 134 39.6
BcaB07g32663 Brassica carinata HOM05D012212 ORTHO05D006213 3.6e-07 58.9 127 39.4
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 3.6e-07 58.9 132 37.9
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 4.7e-07 58.5 112 33.9
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 4.7e-07 58.5 122 34.4
THA.LOC104798624 Tarenaya hassleriana HOM05D012212 ORTHO05D006213 4.7e-07 58.5 127 36.2
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 6.1e-07 58.2 115 37.4
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 6.1e-07 58.2 115 37.4
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 6.1e-07 58.2 115 37.4
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 8.0e-07 57.8 122 36.1
Sopen02g019050 Solanum pennellii HOM05D005932 ORTHO05D006213 8.0e-07 57.8 135 36.3
BraA09t39118Z Brassica rapa HOM05D012212 ORTHO05D006213 1.0e-06 57.4 129 39.5
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 1.0e-06 57.4 141 34.8
A09p35930 Brassica napus HOM05D012212 ORTHO05D006213 1.4e-06 57.0 125 36.8
Psat1g167520 Pisum sativum HOM05D005932 ORTHO05D006213 1.8e-06 56.6 130 38.5
Potri.001G371800 Populus trichocarpa HOM05D005932 ORTHO05D006213 1.8e-06 56.6 123 39.8
TWI63G1224 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 1.8e-06 56.6 118 36.4
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 2.3e-06 56.2 117 36.8
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 2.3e-06 56.2 127 31.5
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 3.0e-06 55.8 112 37.5
ATR0165G002 Amborella trichopoda HOM05D005932 ORTHO05D006213 4.0e-06 55.5 108 34.3
AL1G44550 Arabidopsis lyrata HOM05D012212 ORTHO05D006213 4.0e-06 55.5 122 42.6
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 4.0e-06 55.5 117 35.9
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 5.2e-06 55.1 126 34.1
Aa31LG6G11760 Aethionema arabicum HOM05D012212 ORTHO05D006213 6.7e-06 54.7 132 34.1
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 6.7e-06 54.7 128 34.4
Medtr2g030220 Medicago truncatula HOM05D005932 ORTHO05D006213 8.8e-06 54.3 127 40.2


User provided reference genes

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