Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G1916 Fragaria x ananassa HOM05D005967 ORTHO05D005174 6.1e-106 387.5 197 100.0
FvH4_3g35950 Fragaria vesca HOM05D005967 ORTHO05D005174 1.2e-104 383.3 197 99.0
FAN21G3710 Fragaria x ananassa HOM05D005967 ORTHO05D005174 7.0e-102 374.0 197 96.4
FAN25G3118 Fragaria x ananassa HOM05D005967 ORTHO05D005174 2.0e-101 372.5 197 96.4
FAN16G3022 Fragaria x ananassa HOM05D005967 ORTHO05D005174 5.9e-101 370.9 197 95.9
RcHm_v2.0_Chr5g0064301 Rosa chinensis HOM05D005967 ORTHO05D005174 1.9e-75 286.2 193 78.8
Prupe.6G078900 Prunus persica HOM05D005967 ORTHO05D005174 2.1e-29 133.3 187 52.9
MD03G1095400 Malus domestica HOM05D005967 ORTHO05D005174 5.1e-28 128.6 189 51.9
MD11G1110400 Malus domestica HOM05D005967 ORTHO05D005174 3.3e-27 125.9 189 50.8
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 1.2e-24 117.5 185 45.9
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 5.0e-23 112.1 182 45.1
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 1.4e-20 104.0 107 59.8
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 7.4e-19 98.2 194 39.7
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 4.1e-17 92.4 93 60.2
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 9.1e-17 91.3 172 43.6
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 1.5e-16 90.5 114 50.9
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 3.5e-16 89.4 94 54.3
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 1.3e-15 87.4 121 49.6
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 1.1e-14 84.3 160 39.4
Sabra16G0144100 Salix brachista HOM05D005967 ORTHO05D005174 1.5e-14 84.0 129 48.8
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 2.5e-14 83.2 184 41.8
Sed0015612 Sechium edule HOM05D005967 ORTHO05D005174 4.2e-14 82.4 97 51.5
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 5.5e-14 82.0 173 37.6
Oeu019207.1 Olea europaea HOM05D005967 ORTHO05D005174 2.7e-13 79.7 103 45.6
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 3.6e-13 79.3 69 66.7
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 4.7e-13 79.0 133 41.4
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 6.1e-13 78.6 104 44.2
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 1.0e-12 77.8 123 47.2
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 1.4e-12 77.4 188 35.6
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.8e-12 77.0 104 43.3
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 5.2e-12 75.5 130 45.4
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 5.2e-12 75.5 79 58.2
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 6.7e-12 75.1 170 32.4
CsaV3_1G034090 Cucumis sativus L. HOM05D005967 ORTHO05D005174 8.8e-12 74.7 78 59.0
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 1.1e-11 74.3 125 44.8
DCAR_005974 Daucus carota HOM05D005967 ORTHO05D005174 1.5e-11 73.9 117 41.0
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 2.0e-11 73.6 184 37.5
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 2.0e-11 73.6 184 34.8
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 3.3e-11 72.8 185 35.7
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 3.3e-11 72.8 106 52.8
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 3.3e-11 72.8 106 52.8
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 3.3e-11 72.8 106 52.8
MELO3C020645.2 Cucumis melo HOM05D005967 ORTHO05D005174 4.4e-11 72.4 75 58.7
Glyma.13G335500 Glycine max HOM05D005967 ORTHO05D005174 5.7e-11 72.0 93 44.1
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 5.7e-11 72.0 194 36.6
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.2e-10 70.1 78 57.7
ClCG03G001590 Citrullus lanatus HOM05D005967 ORTHO05D005174 2.8e-10 69.7 69 62.3
Gohir.A03G037600 Gossypium hirsutum HOM05D005967 ORTHO05D005174 8.2e-10 68.2 115 45.2
Oeu054156.1 Olea europaea HOM05D005967 ORTHO05D005174 8.2e-10 68.2 95 48.4
Psat7g217000 Pisum sativum HOM05D005967 ORTHO05D005174 1.1e-09 67.8 108 41.7
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 1.1e-09 67.8 183 36.6
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 3.1e-09 66.2 119 46.2
VMungo1080G1048 Vigna mungo HOM05D005967 ORTHO05D005174 3.1e-09 66.2 185 35.1
Glyma.15G038800 Glycine max HOM05D005967 ORTHO05D005174 5.3e-09 65.5 187 34.2
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 7.0e-09 65.1 107 44.9
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 1.2e-08 64.3 139 43.2
Psat0s8791g0040 Pisum sativum HOM05D005967 ORTHO05D005174 1.2e-08 64.3 107 38.3
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 2.0e-08 63.5 163 35.6
Sabra06G0064300 Salix brachista HOM05D000729 ORTHO05D001063 2.0e-08 63.5 127 39.4
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 3.5e-08 62.8 100 44.0
Medtr4g063885 Medicago truncatula HOM05D005967 ORTHO05D005174 4.5e-08 62.4 125 37.6
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 4.5e-08 62.4 95 46.3
Ca_28209_v3 Cicer arietinum L. HOM05D005967 ORTHO05D005174 5.9e-08 62.0 124 42.7
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 7.7e-08 61.6 136 40.4
Rhsim01G0227100 Rhododendron simsii HOM05D005967 ORTHO05D005174 7.7e-08 61.6 122 37.7
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 1.0e-07 61.2 118 41.5
TAR636G2062 Trochodendron aralioides HOM05D000645 ORTHO05D000494 1.0e-07 61.2 104 42.3
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 1.3e-07 60.8 165 35.2
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.7e-07 60.5 100 43.0
AUR62009584 Chenopodium quinoa HOM05D035467 ORTHO05D031022 2.9e-07 59.7 121 38.8
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 3.8e-07 59.3 83 41.0
Actinidia23945 Actinidia chinensis HOM05D005967 ORTHO05D005174 5.0e-07 58.9 70 48.6
AUR62001796 Chenopodium quinoa HOM05D035467 ORTHO05D031022 5.0e-07 58.9 65 49.2
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 6.5e-07 58.5 124 42.7
Phvul.L004943 Phaseolus vulgaris HOM05D005967 ORTHO05D005174 6.5e-07 58.5 171 33.9
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 8.5e-07 58.2 81 45.7
Atru.chr3.3892 Acer truncatum HOM05D005967 ORTHO05D005174 1.1e-06 57.8 197 33.0
Potri.006G084700 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.1e-06 57.8 127 40.2
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 1.5e-06 57.4 76 48.7
Migut.N02671 Erythranthe guttata HOM05D005967 ORTHO05D005174 1.5e-06 57.4 103 44.7
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 2.5e-06 56.6 90 43.3
Lj3g0014047 Lotus japonicus HOM05D005967 ORTHO05D005174 2.5e-06 56.6 103 43.7
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 2.5e-06 56.6 121 38.8
Oeu007791.1 Olea europaea HOM05D005967 ORTHO05D005174 3.2e-06 56.2 123 35.0
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 4.2e-06 55.8 82 48.8
Hma1.2p1_1513F.1_g288050 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 4.2e-06 55.8 159 33.3
Hma1.2p1_1829F.1_g304460 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 4.2e-06 55.8 92 44.6
Peaxi162Scf00679g00042 Petunia axillaris HOM05D005967 ORTHO05D014046 4.2e-06 55.8 81 38.3


User provided reference genes

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