Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G1748 Fragaria x ananassa HOM05D004065 ORTHO05D004806 1.4e-81 306.2 150 100.0
FAN14G4766 Fragaria x ananassa HOM05D004065 ORTHO05D004806 1.1e-78 296.6 154 96.1
FAN18G1692 Fragaria x ananassa HOM05D004065 ORTHO05D004806 1.1e-78 296.6 154 96.1
FAN06G1862 Fragaria x ananassa HOM05D004065 ORTHO05D004806 2.7e-69 265.4 134 97.8
FvH4_7g26620 Fragaria vesca HOM05D004065 ORTHO05D004806 3.0e-68 261.9 131 98.5
FAN08G2500 Fragaria x ananassa HOM05D000391 ORTHO05D000293 5.0e-68 261.2 128 99.2
FAN03G2077 Fragaria x ananassa HOM05D004065 ORTHO05D004806 3.6e-66 255.0 135 94.8
FAN25G3689 Fragaria x ananassa HOM05D004065 ORTHO05D004806 2.6e-64 248.8 130 95.4
FAN10G0299 Fragaria x ananassa HOM05D004065 ORTHO05D004806 5.8e-64 247.7 130 94.6
FAN03G1397 Fragaria x ananassa HOM05D004065 ORTHO05D004806 2.2e-63 245.7 130 93.1
FAN06G3343 Fragaria x ananassa HOM05D004065 ORTHO05D004806 9.2e-62 240.4 130 92.3
FAN06G3757 Fragaria x ananassa HOM05D004065 ORTHO05D004806 4.6e-61 238.0 130 91.5
FvH4_7g21970 Fragaria vesca HOM05D004065 ORTHO05D004806 6.0e-61 237.7 130 90.8
FAN06G3693 Fragaria x ananassa HOM05D004065 ORTHO05D004806 1.9e-59 232.6 127 89.8
FAN01G1867 Fragaria x ananassa HOM05D004065 ORTHO05D004806 7.3e-59 230.7 130 90.0
RcHm_v2.0_Chr1g0366301 Rosa chinensis HOM05D004065 ORTHO05D004806 1.2e-56 223.4 134 85.8
Prupe.2G231600 Prunus persica HOM05D004065 ORTHO05D004806 1.3e-55 219.9 130 82.3
MD07G1194200 Malus domestica HOM05D004065 ORTHO05D004806 1.1e-54 216.9 130 83.1
MD01G1124000 Malus domestica HOM05D004065 ORTHO05D004806 9.2e-54 213.8 130 81.5
FAN25G3365 Fragaria x ananassa HOM05D004065 ORTHO05D004806 1.9e-51 206.1 99 100.0
TWI15G0503 Tripterygium wilfordii HOM05D004065 ORTHO05D004806 1.2e-45 186.8 130 70.0
Potri.010G207900 Populus trichocarpa HOM05D004065 ORTHO05D004806 5.1e-44 181.4 130 65.4
Atru.chr12.508 Acer truncatum HOM05D004065 ORTHO05D004806 6.6e-44 181.0 130 67.7
Thecc.10G046900 Theobroma cacao HOM05D004065 ORTHO05D004806 6.6e-44 181.0 130 63.8
TWI38G1478 Tripterygium wilfordii HOM05D004065 ORTHO05D004806 6.6e-44 181.0 130 67.7
Potri.008G052700 Populus trichocarpa HOM05D004065 ORTHO05D004806 8.7e-44 180.6 130 65.4
Haze_17038 Corylus avellana HOM05D004065 ORTHO05D004806 1.1e-43 180.3 130 66.9
COL.COLO4_14967 Corchorus olitorius HOM05D004065 ORTHO05D004806 1.5e-43 179.9 130 64.6
Cfa001505 Carpinus fangiana HOM05D004065 ORTHO05D004806 4.3e-43 178.3 130 66.9
Hma1.2p1_0727F.1_g209200 Hydrangea macrophylla HOM05D004065 ORTHO05D004806 5.6e-43 177.9 130 66.9
Sabra10G0160500 Salix brachista HOM05D004065 ORTHO05D004806 5.6e-43 177.9 130 64.6
Dinv31435 Davidia involucrata HOM05D004065 ORTHO05D004806 1.6e-42 176.4 130 64.6
Duzib106G1820 Durio zibethinus HOM05D004065 ORTHO05D004806 1.6e-42 176.4 130 62.3
TAR633G2080 Trochodendron aralioides HOM05D004065 ORTHO05D004806 2.8e-42 175.6 130 65.4
Dinv25990 Davidia involucrata HOM05D004065 ORTHO05D004806 4.8e-42 174.9 130 64.6
Duzib114G0580 Durio zibethinus HOM05D004065 ORTHO05D004806 1.1e-41 173.7 131 61.1
GSVIVG01016585001 Vitis vinifera HOM05D004065 ORTHO05D004806 1.1e-41 173.7 130 63.8
CiPaw.01G284400 Carya illinoinensis HOM05D004065 ORTHO05D004806 1.8e-41 172.9 130 63.8
Gorai.012G069700 Gossypium raimondii HOM05D004065 ORTHO05D004806 9.0e-41 170.6 130 60.8
CsaV3_5G008100 Cucumis sativus L. HOM05D004065 ORTHO05D004806 1.2e-40 170.2 130 59.2
Sed0019555 Sechium edule HOM05D004065 ORTHO05D004806 1.5e-40 169.9 130 60.8
Gohir.A05G350100 Gossypium hirsutum HOM05D004065 ORTHO05D004806 2.0e-40 169.5 130 60.0
MELO3C023859.2 Cucumis melo HOM05D004065 ORTHO05D004806 2.6e-40 169.1 130 58.5
Gohir.A10G215800 Gossypium hirsutum HOM05D004065 ORTHO05D004806 2.6e-40 169.1 130 60.0
Gohir.D10G224800 Gossypium hirsutum HOM05D004065 ORTHO05D004806 2.6e-40 169.1 130 60.0
ClCG07G003370 Citrullus lanatus HOM05D004065 ORTHO05D004806 4.5e-40 168.3 130 59.2
QL08p059042 Quercus lobata HOM05D004065 ORTHO05D004806 9.9e-40 167.2 130 65.4
CSS0036524 Camellia sinensis var. sinensis HOM05D004065 ORTHO05D004806 1.3e-39 166.8 130 61.5
Manes.10G033000 Manihot esculenta HOM05D004065 ORTHO05D004806 1.3e-39 166.8 130 63.1
Cc02_g08160 Coffea canephora HOM05D004065 ORTHO05D004806 1.7e-39 166.4 133 60.9
Gohir.D04G062400 Gossypium hirsutum HOM05D004065 ORTHO05D004806 1.7e-39 166.4 130 59.2
Gorai.011G255800 Gossypium raimondii HOM05D004065 ORTHO05D004806 1.7e-39 166.4 130 59.2
Ciclev10030542m.g Citrus clementina HOM05D004065 ORTHO05D004806 2.2e-39 166.0 130 60.8
ECA238G1619 Erigeron canadensis HOM05D004065 ORTHO05D004806 2.2e-39 166.0 130 62.3
CANSAT56G4002 Cannabis sativa HOM05D004065 ORTHO05D004806 2.9e-39 165.6 130 63.8
HanXRQChr07g0201231 Helianthus annuus HOM05D004065 ORTHO05D004806 6.4e-39 164.5 130 61.5
SGA_v2.0_scaffold2G00996 Striga asiatica HOM05D004065 ORTHO05D004806 2.4e-38 162.5 133 58.6
Glyma.02G093600 Glycine max HOM05D004065 ORTHO05D004806 3.2e-38 162.2 130 60.0
arahy.Tifrunner.gnm1.ann1.P8VZLW Arachis hypogaea HOM05D004065 ORTHO05D004806 4.2e-38 161.8 130 61.5
arahy.Tifrunner.gnm1.ann1.XU51RJ Arachis hypogaea HOM05D004065 ORTHO05D004806 4.2e-38 161.8 130 61.5
Nn2g10418 Nelumbo nucifera HOM05D004065 ORTHO05D004806 4.2e-38 161.8 130 60.0
Phvul.008G013500 Phaseolus vulgaris HOM05D004065 ORTHO05D004806 5.4e-38 161.4 130 60.8
Lalb_Chr04g0257821 Lupinus albus HOM05D004065 ORTHO05D004806 7.9e-37 157.5 130 60.0
Glyma.10G289700 Glycine max HOM05D004065 ORTHO05D004806 1.0e-36 157.1 130 58.5
Lsat_1_v5_gn_2_117761 Lactuca sativa HOM05D004065 ORTHO05D004806 1.8e-36 156.4 130 58.5
TPR.G15495 Trifolium pratense HOM05D004065 ORTHO05D004806 1.8e-36 156.4 131 58.0
Oeu016023.5 Olea europaea HOM05D004065 ORTHO05D004806 3.0e-36 155.6 133 57.1
DCAR_019167 Daucus carota HOM05D004065 ORTHO05D004806 3.9e-36 155.2 130 59.2
Lj1g0007112 Lotus japonicus HOM05D004065 ORTHO05D004806 6.7e-36 154.5 130 59.2
Peaxi162Scf00658g00731 Petunia axillaris HOM05D004065 ORTHO05D004806 6.7e-36 154.5 130 57.7
Glyma.20G099500 Glycine max HOM05D004065 ORTHO05D004806 8.7e-36 154.1 130 57.7
Actinidia29212 Actinidia chinensis HOM05D004065 ORTHO05D004806 1.1e-35 153.7 130 55.4
EL10Ac2g03418 Beta vulgaris HOM05D004065 ORTHO05D004806 2.5e-35 152.5 130 55.4
Eucgr.G02920 Eucalyptus grandis HOM05D004065 ORTHO05D004806 2.5e-35 152.5 130 54.6
Migut.F01518 Erythranthe guttata HOM05D004065 ORTHO05D004806 3.3e-35 152.1 133 57.1
Rhsim09G0164300 Rhododendron simsii HOM05D004065 ORTHO05D004806 3.3e-35 152.1 132 58.3
BNapus_Darmor_BZH_scaffold_149p00120 Brassica napus HOM05D004065 ORTHO05D004806 4.3e-35 151.8 131 55.7
BraA01t04124Z Brassica rapa HOM05D004065 ORTHO05D004806 4.3e-35 151.8 131 55.7
DCAR_015196 Daucus carota HOM05D004065 ORTHO05D004806 4.3e-35 151.8 130 56.9
PGR142G1305 Punica granatum HOM05D004065 ORTHO05D004806 4.3e-35 151.8 130 53.1
C01p52580 Brassica napus HOM05D004065 ORTHO05D004806 5.6e-35 151.4 131 55.0
Ca_07234_v3 Cicer arietinum L. HOM05D004065 ORTHO05D004806 5.6e-35 151.4 130 56.9
Psat6g236120 Pisum sativum HOM05D004065 ORTHO05D004806 5.6e-35 151.4 130 56.2
Aa31LG3G60 Aethionema arabicum HOM05D004065 ORTHO05D004806 2.1e-34 149.4 130 55.4
BcaB04g21060 Brassica carinata HOM05D004065 ORTHO05D004806 2.1e-34 149.4 131 55.7
BolC1t05197H Brassica oleracea HOM05D004065 ORTHO05D004806 2.1e-34 149.4 131 55.7
AL3G24260 Arabidopsis lyrata HOM05D004065 ORTHO05D004806 2.8e-34 149.1 131 55.0
BcaB04g21068 Brassica carinata HOM05D004065 ORTHO05D004806 3.7e-34 148.7 131 53.4
AT3G12590 Arabidopsis thaliana HOM05D004065 ORTHO05D004806 4.8e-34 148.3 131 55.7
CARHR087100 Cardamine hirsuta HOM05D004065 ORTHO05D004806 6.2e-34 147.9 131 54.2
Medtr7g024190 Medicago truncatula HOM05D004065 ORTHO05D004806 8.1e-34 147.5 130 56.2
Hund20020 Selenicereus undatus HOM05D004065 ORTHO05D004806 1.1e-33 147.1 130 53.1
LjContig00357g0027530 Lotus japonicus HOM05D004065 ORTHO05D004806 1.4e-33 146.7 130 55.4
THA.LOC104799352 Tarenaya hassleriana HOM05D004065 ORTHO05D004806 1.4e-33 146.7 130 55.4
BraA03t12924Z Brassica rapa HOM05D004065 ORTHO05D004806 1.8e-33 146.4 131 51.1
Nitab4.5_0001836g0030 Nicotiana tabacum HOM05D004065 ORTHO05D004806 1.8e-33 146.4 129 57.4
Carub.0003s1194 Capsella rubella HOM05D004065 ORTHO05D004806 3.1e-33 145.6 131 54.2
Psat3g180760 Pisum sativum HOM05D004065 ORTHO05D004806 3.1e-33 145.6 130 53.8
A03p37690 Brassica napus HOM05D000062 ORTHO05D004806 4.0e-33 145.2 131 50.4
Sp3g10730 Schrenkiella parvula HOM05D004065 ORTHO05D004806 4.0e-33 145.2 131 51.9
C03p45740 Brassica napus HOM05D000062 ORTHO05D004806 5.3e-33 144.8 131 50.4
Solyc06g042950.3 Solanum lycopersicum HOM05D004065 ORTHO05D004806 5.3e-33 144.8 130 55.4
Sopen06g010560 Solanum pennellii HOM05D004065 ORTHO05D004806 5.3e-33 144.8 130 55.4
Thhalv10019927m.g Eutrema salsugineum HOM05D004065 ORTHO05D004806 1.2e-32 143.7 131 51.1
Lalb_Chr06g0164301 Lupinus albus HOM05D004065 ORTHO05D004806 5.8e-32 141.4 130 56.2
Nitab4.5_0005137g0020 Nicotiana tabacum HOM05D004065 ORTHO05D004806 7.6e-32 141.0 129 55.0
MSTRG.8235 Avicennia marina HOM05D004065 ORTHO05D004806 9.9e-32 140.6 133 55.6
Sc20g0002620 Simmondsia chinensis HOM05D004065 ORTHO05D004806 1.7e-31 139.8 135 51.9
SalBow6G0580 Salvia bowleyana HOM05D004065 ORTHO05D004806 2.2e-31 139.4 133 52.6
Lj8C86G13 Lonicera japonica HOM05D004065 ORTHO05D004806 3.8e-31 138.7 131 52.7
PSO339G3310 Papaver somniferum HOM05D004065 ORTHO05D004806 1.9e-30 136.3 131 52.7
BcaC01g04018 Brassica carinata HOM05D004065 ORTHO05D004806 7.1e-30 134.4 122 50.0
AUR62038371 Chenopodium quinoa HOM05D004065 ORTHO05D004806 9.3e-30 134.0 130 50.0
AUR62040961 Chenopodium quinoa HOM05D004065 ORTHO05D004806 9.3e-30 134.0 130 50.8
Aqoxy2G02042 Aquilegia oxysepala HOM05D004065 ORTHO05D004806 1.0e-28 130.6 134 49.3
unitig_26.g10019 Utricularia gibba HOM05D004065 ORTHO05D004806 1.0e-28 130.6 133 48.1
Zm00001eb139750 Zea mays HOM05D004065 ORTHO05D004806 6.2e-26 121.3 130 43.1
CDE04G2206 Ceratophyllum demersum HOM05D004065 ORTHO05D004806 5.3e-25 118.2 146 41.8
ATR0559G344 Amborella trichopoda HOM05D004065 ORTHO05D004806 1.4e-22 110.2 146 40.4
CiPaw.02G182500 Carya illinoinensis HOM05D004065 ORTHO05D004806 4.6e-21 105.1 76 64.5
Cpa.g.sc1437.1 Carica papaya HOM05D004065 ORTHO05D004806 2.5e-19 99.4 130 45.4
HPP92_003382 Vanilla planifolia HOM05D004065 ORTHO05D004806 4.3e-19 98.6 149 35.6
BcaB04g21053 Brassica carinata HOM05D004065 ORTHO05D004806 3.1e-17 92.4 118 44.1
SHI22587 Sapria himalayana HOM05D004065 ORTHO05D004806 1.5e-16 90.1 132 37.1
BolC8t48103H Brassica oleracea HOM05D004065 ORTHO05D004806 1.8e-12 76.6 77 44.2
Mapoly0126s0012 Marchantia polymorpha HOM05D004065 ORTHO05D004806 1.1e-06 57.4 155 27.7


User provided reference genes

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