Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G1665 Fragaria x ananassa HOM05D010503 ORTHO05D035703 1.6e-163 579.3 283 100.0
FvH4_3g45040 Fragaria vesca HOM05D010503 ORTHO05D035703 9.6e-161 570.1 280 98.9
FAN25G3542 Fragaria x ananassa HOM05D010503 ORTHO05D022602 8.2e-104 380.9 276 69.2
FvH4_3g45051 Fragaria vesca HOM05D010503 ORTHO05D035703 1.7e-80 303.5 244 62.7
FAN11G3125 Fragaria x ananassa HOM05D010503 ORTHO05D022602 1.4e-79 300.4 249 62.2
FAN21G1560 Fragaria x ananassa HOM05D010503 ORTHO05D022602 1.2e-65 254.2 234 59.4
FvH4_5g09850 Fragaria vesca HOM05D010503 ORTHO05D025357 1.5e-52 210.7 281 44.1
FAN12G1570 Fragaria x ananassa HOM05D010503 ORTHO05D025357 2.4e-50 203.4 277 43.0
FAN21G3807 Fragaria x ananassa HOM05D010503 ORTHO05D022602 2.0e-49 200.3 162 63.0
FvH4_3g45020 Fragaria vesca HOM05D010503 ORTHO05D022602 2.2e-48 196.8 151 66.9
FAN08G1148 Fragaria x ananassa HOM05D010503 ORTHO05D025357 8.1e-43 178.3 274 41.6
FAN08G1136 Fragaria x ananassa HOM05D010503 ORTHO05D025357 4.6e-30 136.0 192 42.2
FvH4_4g08081 Fragaria vesca HOM05D010503 ORTHO05D025357 4.3e-28 129.4 214 36.0
RcHm_v2.0_Chr5g0082881 Rosa chinensis HOM05D010503 ORTHO05D017963 4.8e-27 125.9 234 35.9
FAN08G2932 Fragaria x ananassa HOM05D010503 ORTHO05D017963 1.8e-26 124.0 250 34.0
FAN08G3287 Fragaria x ananassa HOM05D010503 ORTHO05D017963 1.8e-26 124.0 250 34.0
FvH4_3g45030 Fragaria vesca HOM05D006854 ORTHO05D017963 4.5e-25 119.4 246 34.1
FvH4_5g09840 Fragaria vesca HOM05D010503 ORTHO05D017963 6.5e-24 115.5 236 34.3
RcHm_v2.0_Chr5g0082901 Rosa chinensis HOM05D010503 ORTHO05D022602 1.1e-23 114.8 105 52.4
FAN21G2812 Fragaria x ananassa HOM05D010503 ORTHO05D017963 7.1e-23 112.1 240 32.1
FvH4_5g04834 Fragaria vesca HOM05D006854 ORTHO05D029389 1.1e-18 98.2 179 37.4
RcHm_v2.0_Chr7g0191221 Rosa chinensis HOM05D006854 ORTHO05D011215 1.1e-18 98.2 172 35.5
FvH4_5g06850 Fragaria vesca HOM05D006854 ORTHO05D011215 1.4e-18 97.8 169 36.1
FAN11G2338 Fragaria x ananassa HOM05D006854 ORTHO05D017963 4.1e-18 96.3 241 31.1
RcHm_v2.0_Chr7g0191591 Rosa chinensis HOM05D006854 ORTHO05D011215 9.0e-18 95.1 182 33.5
FAN25G0720 Fragaria x ananassa HOM05D006854 ORTHO05D017963 3.4e-17 93.2 241 29.9
FvH4_4g04731 Fragaria vesca HOM05D010503 ORTHO05D197754 1.0e-16 91.7 137 41.6
FvH4_3g45050 Fragaria vesca HOM05D006854 ORTHO05D035528 2.2e-16 90.5 237 30.8
FvH4_5g08080 Fragaria vesca HOM05D006854 ORTHO05D011215 5.0e-16 89.4 284 28.5
FAN18G0896 Fragaria x ananassa HOM05D006854 ORTHO05D011215 5.0e-16 89.4 245 28.2
RcHm_v2.0_Chr4g0410881 Rosa chinensis HOM05D006854 ORTHO05D046355 8.5e-16 88.6 245 28.6
FAN11G2503 Fragaria x ananassa HOM05D006854 ORTHO05D035528 1.1e-15 88.2 236 29.2
FAN18G3526 Fragaria x ananassa HOM05D006854 ORTHO05D210570 1.1e-15 88.2 207 31.9
FvH4_3g45070 Fragaria vesca HOM05D006854 ORTHO05D035528 1.9e-15 87.4 236 29.2
FvH4_5g04830 Fragaria vesca HOM05D006854 ORTHO05D022664 2.5e-15 87.0 255 31.4
RcHm_v2.0_Chr7g0194391 Rosa chinensis HOM05D006854 ORTHO05D035501 2.5e-15 87.0 256 31.6
FvH4_1g21520 Fragaria vesca HOM05D006854 ORTHO05D011215 4.2e-15 86.3 109 43.1
FvH4_5g06960 Fragaria vesca HOM05D006854 ORTHO05D011215 4.2e-15 86.3 227 28.6
FAN19G1045 Fragaria x ananassa HOM05D006854 ORTHO05D011215 4.2e-15 86.3 109 43.1
FvH4_6g41381 Fragaria vesca HOM05D006854 ORTHO05D035430 5.5e-15 85.9 160 37.5
FAN13G1691 Fragaria x ananassa HOM05D006854 ORTHO05D022664 5.5e-15 85.9 108 43.5
RcHm_v2.0_Chr7g0189311 Rosa chinensis HOM05D000082 ORTHO05D000038 5.5e-15 85.9 124 39.5
FAN04G2532 Fragaria x ananassa HOM05D006854 ORTHO05D022664 9.4e-15 85.1 108 43.5
FAN08G3474 Fragaria x ananassa HOM05D006854 ORTHO05D022664 9.4e-15 85.1 108 43.5
FAN08G2196 Fragaria x ananassa HOM05D006854 ORTHO05D011215 1.6e-14 84.3 191 32.5
FvH4_5g06931 Fragaria vesca HOM05D006854 ORTHO05D011215 2.7e-14 83.6 175 30.9
FvH4_5g04833 Fragaria vesca HOM05D006854 ORTHO05D029560 4.6e-14 82.8 201 33.3
FvH4_5g08121 Fragaria vesca HOM05D006854 ORTHO05D011215 6.1e-14 82.4 167 33.5
FAN08G0630 Fragaria x ananassa HOM05D006854 ORTHO05D029560 6.1e-14 82.4 105 44.8
FAN18G1646 Fragaria x ananassa HOM05D006854 ORTHO05D011215 1.4e-13 81.3 195 29.7
RcHm_v2.0_Chr6g0269041 Rosa chinensis HOM05D006854 ORTHO05D000038 1.4e-13 81.3 212 29.2
FvH4_5g09910 Fragaria vesca HOM05D006854 ORTHO05D046355 2.3e-13 80.5 259 26.3
FAN08G0245 Fragaria x ananassa HOM05D006854 ORTHO05D011215 2.3e-13 80.5 194 32.0
RcHm_v2.0_Chr6g0255331 Rosa chinensis HOM05D006854 ORTHO05D029561 2.3e-13 80.5 156 34.6
RcHm_v2.0_Chr7g0194301 Rosa chinensis HOM05D006854 ORTHO05D022664 3.0e-13 80.1 136 37.5
FAN23G0565 Fragaria x ananassa HOM05D006854 ORTHO05D011215 5.1e-13 79.3 101 42.6
FvH4_5g04821 Fragaria vesca HOM05D006854 ORTHO05D022664 8.8e-13 78.6 108 42.6
FvH4_5g06910 Fragaria vesca HOM05D006854 ORTHO05D011215 8.8e-13 78.6 195 30.3
RcHm_v2.0_Chr7g0190371 Rosa chinensis HOM05D006854 ORTHO05D011215 1.5e-12 77.8 176 30.1
FAN18G4459 Fragaria x ananassa HOM05D006854 ORTHO05D000038 2.0e-12 77.4 122 36.1
FAN08G2487 Fragaria x ananassa HOM05D006854 ORTHO05D029560 2.5e-12 77.0 99 43.4
FAN13G0959 Fragaria x ananassa HOM05D006854 ORTHO05D029560 2.5e-12 77.0 196 31.6
FvH4_6g52331 Fragaria vesca HOM05D000082 ORTHO05D000038 3.3e-12 76.6 196 31.1
FvH4_6g52340 Fragaria vesca HOM05D000082 ORTHO05D000038 3.3e-12 76.6 196 31.1
FAN18G1761 Fragaria x ananassa HOM05D006854 ORTHO05D011215 3.3e-12 76.6 133 33.8
FAN08G3482 Fragaria x ananassa HOM05D006854 ORTHO05D205589 9.7e-12 75.1 217 30.4
FAN18G3954 Fragaria x ananassa HOM05D006854 ORTHO05D011215 1.3e-11 74.7 110 42.7
FvH4_6g41383 Fragaria vesca HOM05D006854 ORTHO05D000038 1.7e-11 74.3 121 37.2
FvH4_5g04570 Fragaria vesca HOM05D000082 ORTHO05D000038 3.7e-11 73.2 113 38.1
FAN18G1003 Fragaria x ananassa HOM05D006854 ORTHO05D011215 3.7e-11 73.2 190 31.1
FvH4_2g05200 Fragaria vesca HOM05D041790 ORTHO05D029561 1.1e-10 71.6 218 26.6
FvH4_1g21510 Fragaria vesca HOM05D000500 ORTHO05D000367 1.4e-10 71.2 109 34.9
FvH4_5g04820 Fragaria vesca HOM05D006854 ORTHO05D035501 3.1e-10 70.1 80 47.5
FAN04G0586 Fragaria x ananassa HOM05D006854 ORTHO05D011215 4.1e-10 69.7 150 33.3
FAN19G0565 Fragaria x ananassa HOM05D006854 ORTHO05D011215 4.1e-10 69.7 108 34.3
RcHm_v2.0_Chr3g0484371 Rosa chinensis HOM05D009507 ORTHO05D000038 4.1e-10 69.7 191 31.4
RcHm_v2.0_Chr7g0194201 Rosa chinensis HOM05D006854 ORTHO05D000038 4.1e-10 69.7 228 29.4
FvH4_5g07200 Fragaria vesca HOM05D006854 ORTHO05D011215 5.3e-10 69.3 118 36.4
FAN13G1069 Fragaria x ananassa HOM05D006854 ORTHO05D011215 5.3e-10 69.3 181 30.9
RcHm_v2.0_Chr3g0484461 Rosa chinensis HOM05D009507 ORTHO05D000038 1.2e-09 68.2 194 30.9
FAN25G3637 Fragaria x ananassa HOM05D006854 ORTHO05D045930 2.6e-09 67.0 163 30.1
FvH4_5g05590 Fragaria vesca HOM05D000082 ORTHO05D035430 4.5e-09 66.2 163 33.1
RcHm_v2.0_Chr1g0314791 Rosa chinensis HOM05D000082 ORTHO05D000038 4.5e-09 66.2 199 30.2
FAN13G1373 Fragaria x ananassa HOM05D006854 ORTHO05D011215 5.9e-09 65.9 171 30.4
RcHm_v2.0_Chr3g0464271 Rosa chinensis HOM05D006854 ORTHO05D025449 7.7e-09 65.5 207 29.5
FvH4_5g09630 Fragaria vesca HOM05D006854 ORTHO05D011215 1.3e-08 64.7 149 31.5
FAN04G2330 Fragaria x ananassa HOM05D006854 ORTHO05D035501 3.8e-08 63.2 80 43.8
FAN04G3112 Fragaria x ananassa HOM05D006854 ORTHO05D011215 6.5e-08 62.4 153 30.7
FAN05G2362 Fragaria x ananassa HOM05D000082 ORTHO05D000038 6.5e-08 62.4 179 29.6
FAN25G2639 Fragaria x ananassa HOM05D010503 ORTHO05D017963 6.5e-08 62.4 150 32.0
FAN27G1660 Fragaria x ananassa HOM05D041790 ORTHO05D029561 6.5e-08 62.4 152 26.3
FvH4_6g52350 Fragaria vesca HOM05D000082 ORTHO05D045928 8.5e-08 62.0 117 37.6
FAN09G0945 Fragaria x ananassa HOM05D000082 ORTHO05D000038 1.1e-07 61.6 106 35.8
FvH4_5g06150 Fragaria vesca HOM05D006854 ORTHO05D029383 1.4e-07 61.2 272 24.6
FvH4_6g52530 Fragaria vesca HOM05D000082 ORTHO05D000038 1.9e-07 60.8 123 37.4
FAN14G0436 Fragaria x ananassa HOM05D000082 ORTHO05D000038 1.9e-07 60.8 123 38.2
RcHm_v2.0_Chr2g0173941 Rosa chinensis HOM05D000082 ORTHO05D000038 1.9e-07 60.8 167 30.5
FvH4_5g09570 Fragaria vesca HOM05D006854 ORTHO05D011215 2.5e-07 60.5 74 41.9
FvH4_5g12010 Fragaria vesca HOM05D006854 ORTHO05D000038 2.5e-07 60.5 211 29.4
FAN18G1262 Fragaria x ananassa HOM05D006854 ORTHO05D011215 2.5e-07 60.5 144 30.6
FAN08G1170 Fragaria x ananassa HOM05D006854 ORTHO05D029383 3.2e-07 60.1 269 23.8
FvH4_4g33620 Fragaria vesca HOM05D000082 ORTHO05D000038 4.2e-07 59.7 137 30.7
FvH4_6g51740 Fragaria vesca HOM05D019279 ORTHO05D029510 4.2e-07 59.7 167 29.9
FAN12G0007 Fragaria x ananassa HOM05D006854 ORTHO05D011215 4.2e-07 59.7 84 40.5
FAN13G3143 Fragaria x ananassa HOM05D006854 ORTHO05D029383 4.2e-07 59.7 124 32.3
FAN12G2874 Fragaria x ananassa HOM05D006854 ORTHO05D011215 5.5e-07 59.3 83 41.0
RcHm_v2.0_Chr2g0171341 Rosa chinensis HOM05D000082 ORTHO05D000038 5.5e-07 59.3 115 38.3
FvH4_7g15890 Fragaria vesca HOM05D000082 ORTHO05D000038 7.2e-07 58.9 162 27.2
FAN17G1531 Fragaria x ananassa HOM05D000454 ORTHO05D007581 7.2e-07 58.9 113 33.6
FvH4_6g50650 Fragaria vesca HOM05D000082 ORTHO05D000038 9.4e-07 58.5 83 41.0
FAN09G3574 Fragaria x ananassa HOM05D019279 ORTHO05D029510 9.4e-07 58.5 167 29.9
FAN09G4737 Fragaria x ananassa HOM05D019279 ORTHO05D029510 9.4e-07 58.5 167 29.9
FAN12G4197 Fragaria x ananassa HOM05D005814 ORTHO05D006821 9.4e-07 58.5 141 34.8
RcHm_v2.0_Chr2g0171261 Rosa chinensis HOM05D000082 ORTHO05D000038 9.4e-07 58.5 141 36.2
FAN02G2769 Fragaria x ananassa HOM05D019279 ORTHO05D029510 1.2e-06 58.2 164 29.9
RcHm_v2.0_Chr2g0171251 Rosa chinensis HOM05D000082 ORTHO05D000038 1.2e-06 58.2 83 44.6
FvH4_6g31360 Fragaria vesca HOM05D034923 ORTHO05D045513 1.6e-06 57.8 150 34.7
FAN08G3398 Fragaria x ananassa HOM05D006854 ORTHO05D000038 1.6e-06 57.8 73 45.2
RcHm_v2.0_Chr7g0194401 Rosa chinensis HOM05D000082 ORTHO05D000038 1.6e-06 57.8 86 37.2
Prupe.8G048800 Prunus persica HOM05D000082 ORTHO05D000038 2.1e-06 57.4 72 38.9
FAN02G2610 Fragaria x ananassa HOM05D006854 ORTHO05D011215 2.7e-06 57.0 56 48.2
FAN11G3614 Fragaria x ananassa HOM05D011534 ORTHO05D025449 2.7e-06 57.0 106 30.2
FvH4_4g33600 Fragaria vesca HOM05D000082 ORTHO05D000038 4.7e-06 56.2 137 34.3
FAN02G2940 Fragaria x ananassa HOM05D000082 ORTHO05D000038 4.7e-06 56.2 83 42.2
FAN06G3512 Fragaria x ananassa HOM05D001605 ORTHO05D003014 4.7e-06 56.2 167 26.3
FAN14G0223 Fragaria x ananassa HOM05D006854 ORTHO05D045928 4.7e-06 56.2 108 35.2
FvH4_2g01040 Fragaria vesca HOM05D004879 ORTHO05D000038 6.1e-06 55.8 76 38.2
FvH4_2g15860 Fragaria vesca HOM05D006854 ORTHO05D000038 6.1e-06 55.8 179 27.4
Nn5g27821 Nelumbo nucifera HOM05D000082 ORTHO05D000038 6.1e-06 55.8 85 35.3
RcHm_v2.0_Chr6g0306361 Rosa chinensis HOM05D009507 ORTHO05D016294 6.1e-06 55.8 168 28.6
FAN02G0518 Fragaria x ananassa HOM05D000082 ORTHO05D000038 7.9e-06 55.5 94 39.4


User provided reference genes

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